RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 RAI2Q9Y5P3 530 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 ANKRD36A6QL64 1941 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 HELZP42694 1942 aaKnown RBP13.18□□□□□ -0.3
CCSER1-205ENST00000505073 MYOCOSA0A1B0GUC4 107 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 SMAD6O43541 496 aaKnown RBP13.18□□□□□ -0.3
CCSER1-205ENST00000505073 TRMUO75648 421 aaKnown RBP13.18□□□□□ -0.3
CCSER1-205ENST00000505073 PRLP01236 227 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 EPOP01588 193 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 RHOAP61586 193 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 IRF9Q00978 393 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 TMED1Q13445 227 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 CBX2Q14781 532 aaPredicted RBP13.18□□□□□ -0.3
CCSER1-205ENST00000505073 IYDQ6PHW0 289 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 TMEM25Q86YD3 366 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 SLC41A1Q8IVJ1 513 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 PLD6Q8N2A8 252 aaKnown RBP13.18□□□□□ -0.3
CCSER1-205ENST00000505073 C12orf76Q8N812 135 aaPredicted RBP13.18□□□□□ -0.3
CCSER1-205ENST00000505073 OR6P1Q8NGX9 317 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 PDCD6IPQ8WUM4 868 aaKnown RBP13.18□□□□□ -0.3
CCSER1-205ENST00000505073 TDRD1Q9BXT4 1180 aaKnown RBP13.18□□□□□ -0.3
CCSER1-205ENST00000505073 TM6SF2Q9BZW4 377 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 RHOJQ9H4E5 214 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 NSMCE4AQ9NXX6 385 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 FBXO5Q9UKT4 447 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 SPO11Q9Y5K1 396 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 XYLBO75191 536 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 RALBP11234 206 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 PFKLP17858 780 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 MAGEA12P43365 314 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 MRPS22P82650 360 aaKnown RBP13.17□□□□□ -0.3
CCSER1-205ENST00000505073 TRAF2Q12933 501 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 PTPRRQ15256 657 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 ZNF789Q5FWF6 425 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 C16orf89Q6UX73 402 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 LDB1Q86U70 411 aaPredicted RBP13.17□□□□□ -0.3
CCSER1-205ENST00000505073 SPNS2Q8IVW8 549 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 LPCAT1Q8NF37 534 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 OR13C4Q8NGS5 318 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 OR6K2Q8NGY2 324 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 ABTB1Q969K4 478 aaPredicted RBP13.17□□□□□ -0.3
CCSER1-205ENST00000505073 ISL2Q96A47 359 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 GPR22Q99680 433 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 TDP1Q9NUW8 608 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 TMEM216Q9P0N5 145 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 COPG2Q9UBF2 871 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 INTS6Q9UL03 887 aaKnown RBP13.17□□□□□ -0.3
CCSER1-205ENST00000505073 A0A096LPK6 155 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 E9PBE3 544 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 PHGDHO43175 533 aaKnown RBP13.17□□□□□ -0.3
CCSER1-205ENST00000505073 KLHL41O60662 606 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 SLC4A1P02730 911 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 C2P06681 752 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 CEBPBP17676 345 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 HOXA9P31269 272 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 MAGEA10P43363 369 aaPredicted RBP13.17□□□□□ -0.3
CCSER1-205ENST00000505073 NUDT2P50583 147 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 FLOT2Q14254 428 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 INO80DQ53TQ3 878 aaPredicted RBP13.17□□□□□ -0.3
CCSER1-205ENST00000505073 PRSS36Q5K4E3 855 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 C6orf52Q5T4I8 152 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 EPGNQ6UW88 154 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 MFSD6LQ8IWD5 586 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 C2CD4AQ8NCU7 369 aaPredicted RBP13.17□□□□□ -0.3
CCSER1-205ENST00000505073 ZNF707Q96C28 371 aaPredicted RBP13.17□□□□□ -0.3
CCSER1-205ENST00000505073 TBATAQ96M53 351 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 LINC00597Q9H2U6 94 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 PACSIN3Q9UKS6 424 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 CEPT1Q9Y6K0 416 aa13.17□□□□□ -0.3
CCSER1-205ENST00000505073 ATP6V1G1O75348 118 aa13.16□□□□□ -0.3
CCSER1-205ENST00000505073 PAPSS2O95340 614 aaPredicted RBP13.16□□□□□ -0.3
CCSER1-205ENST00000505073 FGF19O95750 216 aa13.16□□□□□ -0.3
CCSER1-205ENST00000505073 CYBBP04839 570 aa13.16□□□□□ -0.3
CCSER1-205ENST00000505073 HNRNPA1P09651 372 aaKnown RBP eCLIP13.16□□□□□ -0.3
CCSER1-205ENST00000505073 BMP1P13497 986 aa13.16□□□□□ -0.3
CCSER1-205ENST00000505073 CDH2P19022 906 aaPredicted RBP13.16□□□□□ -0.3
CCSER1-205ENST00000505073 DDX6P26196 483 aaKnown RBP eCLIP13.16□□□□□ -0.3
CCSER1-205ENST00000505073 THOP1P52888 689 aa13.16□□□□□ -0.3
CCSER1-205ENST00000505073 PRAMEP78395 509 aa13.16□□□□□ -0.3
CCSER1-205ENST00000505073 USP10Q14694 798 aaKnown RBP13.16□□□□□ -0.3
CCSER1-205ENST00000505073 INSCQ1MX18 579 aa13.16□□□□□ -0.3
CCSER1-205ENST00000505073 MPP7Q5T2T1 576 aa13.16□□□□□ -0.3
CCSER1-205ENST00000505073 DUS1LQ6P1R4 473 aaKnown RBP13.16□□□□□ -0.3
CCSER1-205ENST00000505073 NCEH1Q6PIU2 408 aa13.16□□□□□ -0.3
CCSER1-205ENST00000505073 CNSTQ6PJW8 725 aa13.16□□□□□ -0.3
CCSER1-205ENST00000505073 PAOXQ6QHF9 649 aa13.16□□□□□ -0.3
CCSER1-205ENST00000505073 BNC2Q6ZN30 1099 aaPredicted RBP13.16□□□□□ -0.3
CCSER1-205ENST00000505073 ZNF554Q86TJ5 538 aa13.16□□□□□ -0.3
CCSER1-205ENST00000505073 FIBINQ8TAL6 211 aa13.16□□□□□ -0.3
CCSER1-205ENST00000505073 C2orf49Q9BVC5 232 aaPredicted RBP13.16□□□□□ -0.3
CCSER1-205ENST00000505073 COG4Q9H9E3 785 aa13.16□□□□□ -0.3
CCSER1-205ENST00000505073 COPS7BQ9H9Q2 264 aaPredicted RBP13.16□□□□□ -0.3
CCSER1-205ENST00000505073 KIAA1522Q9P206 1035 aaPredicted RBP13.16□□□□□ -0.3
CCSER1-205ENST00000505073 BCAP29Q9UHQ4 241 aa13.16□□□□□ -0.3
CCSER1-205ENST00000505073 AK5Q9Y6K8 562 aa13.16□□□□□ -0.3
CCSER1-205ENST00000505073 A0A0U1RQS6 177 aa13.16□□□□□ -0.3
CCSER1-205ENST00000505073 ERVK-21P61565 698 aa13.16□□□□□ -0.3
CCSER1-205ENST00000505073 ZNF460Q14592 562 aa13.16□□□□□ -0.3
CCSER1-205ENST00000505073 UGP2Q16851 508 aa13.16□□□□□ -0.3
CCSER1-205ENST00000505073 PLEKHG6Q3KR16 790 aa13.16□□□□□ -0.3
CCSER1-205ENST00000505073 METTL21CQ5VZV1 264 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms