RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 A0A1W2PQ67 120 aa13.06□□□□□ -0.32
DDX41-204ENST00000504807 LRRD1A4D1F6 860 aa13.06□□□□□ -0.32
DDX41-204ENST00000504807 PPM1DO15297 605 aa13.06□□□□□ -0.32
DDX41-204ENST00000504807 INPP4BO15327 924 aa13.06□□□□□ -0.32
DDX41-204ENST00000504807 MTA2O94776 668 aa13.06□□□□□ -0.32
DDX41-204ENST00000504807 ATP1A1P05023 1023 aaKnown RBP13.06□□□□□ -0.32
DDX41-204ENST00000504807 PIRTP0C851 137 aa13.06□□□□□ -0.32
DDX41-204ENST00000504807 TEAD1P28347 426 aa13.06□□□□□ -0.32
DDX41-204ENST00000504807 CSF2RBP32927 897 aa13.06□□□□□ -0.32
DDX41-204ENST00000504807 ARSDP51689 593 aa13.06□□□□□ -0.32
DDX41-204ENST00000504807 CYP4F2P78329 520 aa13.06□□□□□ -0.32
DDX41-204ENST00000504807 PPIDQ08752 370 aaKnown RBP13.06□□□□□ -0.32
DDX41-204ENST00000504807 GALNT3Q14435 633 aa13.06□□□□□ -0.32
DDX41-204ENST00000504807 CLCA4Q14CN2 919 aa13.06□□□□□ -0.32
DDX41-204ENST00000504807 C16orf72Q14CZ0 275 aa13.06□□□□□ -0.32
DDX41-204ENST00000504807 ZNF648Q5T619 568 aaPredicted RBP13.06□□□□□ -0.32
DDX41-204ENST00000504807 ADAMTSL4Q6UY14 1074 aa13.06□□□□□ -0.32
DDX41-204ENST00000504807 CCDC13Q8IYE1 715 aa13.06□□□□□ -0.32
DDX41-204ENST00000504807 BBS5Q8N3I7 341 aa13.06□□□□□ -0.32
DDX41-204ENST00000504807 ATL2Q8NHH9 583 aa13.06□□□□□ -0.32
DDX41-204ENST00000504807 WDR36Q8NI36 951 aaKnown RBP13.06□□□□□ -0.32
DDX41-204ENST00000504807 ZDHHC1Q8WTX9 485 aa13.06□□□□□ -0.32
DDX41-204ENST00000504807 NSMCE1Q8WV22 266 aa13.06□□□□□ -0.32
DDX41-204ENST00000504807 SCG3Q8WXD2 468 aaKnown RBP13.06□□□□□ -0.32
DDX41-204ENST00000504807 RNF25Q96BH1 459 aaPredicted RBP13.06□□□□□ -0.32
DDX41-204ENST00000504807 AP2M1Q96CW1 435 aa13.06□□□□□ -0.32
DDX41-204ENST00000504807 OLFM3Q96PB7 478 aa13.06□□□□□ -0.32
DDX41-204ENST00000504807 PCDH9Q9HC56 1237 aa13.06□□□□□ -0.32
DDX41-204ENST00000504807 FOXJ2Q9P0K8 574 aa13.06□□□□□ -0.32
DDX41-204ENST00000504807 TMEM9Q9P0T7 183 aa13.06□□□□□ -0.32
DDX41-204ENST00000504807 SAE1Q9UBE0 346 aaPredicted RBP13.06□□□□□ -0.32
DDX41-204ENST00000504807 PLD2O14939 933 aa13.05□□□□□ -0.32
DDX41-204ENST00000504807 AKR1B10O60218 316 aa13.05□□□□□ -0.32
DDX41-204ENST00000504807 DNAJC6O75061 913 aa13.05□□□□□ -0.32
DDX41-204ENST00000504807 IVLP07476 585 aa13.05□□□□□ -0.32
DDX41-204ENST00000504807 KRT7P08729 469 aa13.05□□□□□ -0.32
DDX41-204ENST00000504807 PECAM1P16284 738 aaPredicted RBP13.05□□□□□ -0.32
DDX41-204ENST00000504807 WT1P19544 449 aaPredicted RBP13.05□□□□□ -0.32
DDX41-204ENST00000504807 KELP23276 732 aa13.05□□□□□ -0.32
DDX41-204ENST00000504807 SLC5A2P31639 672 aa13.05□□□□□ -0.32
DDX41-204ENST00000504807 CCKBRP32239 447 aa13.05□□□□□ -0.32
DDX41-204ENST00000504807 GPR1P46091 355 aa13.05□□□□□ -0.32
DDX41-204ENST00000504807 MARCKSL1P49006 195 aa13.05□□□□□ -0.32
DDX41-204ENST00000504807 IFI35P80217 286 aaPredicted RBP13.05□□□□□ -0.32
DDX41-204ENST00000504807 ARHGEF7Q14155 803 aa13.05□□□□□ -0.32
DDX41-204ENST00000504807 NOMO1Q15155 1222 aa13.05□□□□□ -0.32
DDX41-204ENST00000504807 PYCR3Q53H96 274 aa13.05□□□□□ -0.32
DDX41-204ENST00000504807 NKAIN2Q5VXU1 208 aa13.05□□□□□ -0.32
DDX41-204ENST00000504807 TIGD7Q6NT04 549 aaPredicted RBP13.05□□□□□ -0.32
DDX41-204ENST00000504807 RAB11FIP2Q7L804 512 aa13.05□□□□□ -0.32
DDX41-204ENST00000504807 KDELC2Q7Z4H8 507 aa13.05□□□□□ -0.32
DDX41-204ENST00000504807 ZNF761Q86XN6 746 aaPredicted RBP13.05□□□□□ -0.32
DDX41-204ENST00000504807 LRRC49Q8IUZ0 686 aa13.05□□□□□ -0.32
DDX41-204ENST00000504807 CCNYQ8ND76 341 aa13.05□□□□□ -0.32
DDX41-204ENST00000504807 TADA1Q96BN2 335 aa13.05□□□□□ -0.32
DDX41-204ENST00000504807 TSPY26PQ9H489 355 aa13.05□□□□□ -0.32
DDX41-204ENST00000504807 ARFGAP3Q9NP61 516 aa13.05□□□□□ -0.32
DDX41-204ENST00000504807 GEMIN8Q9NWZ8 242 aaKnown RBP13.05□□□□□ -0.32
DDX41-204ENST00000504807 TRNAU1APQ9NX07 287 aaKnown RBP13.05□□□□□ -0.32
DDX41-204ENST00000504807 PISDQ9UG56 409 aa13.05□□□□□ -0.32
DDX41-204ENST00000504807 LOXL2Q9Y4K0 774 aa13.05□□□□□ -0.32
DDX41-204ENST00000504807 HEY1Q9Y5J3 304 aa13.05□□□□□ -0.32
DDX41-204ENST00000504807 TRBV23OR9-2A0A075B6M9 112 aa13.04□□□□□ -0.32
DDX41-204ENST00000504807 NUDT21O43809 227 aaKnown RBP13.04□□□□□ -0.32
DDX41-204ENST00000504807 KRT1P04264 644 aa13.04□□□□□ -0.32
DDX41-204ENST00000504807 ITGA2BP08514 1039 aa13.04□□□□□ -0.32
DDX41-204ENST00000504807 CCL4P13236 92 aa13.04□□□□□ -0.32
DDX41-204ENST00000504807 TNNT1P13805 278 aa13.04□□□□□ -0.32
DDX41-204ENST00000504807 CD1CP29017 333 aa13.04□□□□□ -0.32
DDX41-204ENST00000504807 CA5AP35218 305 aa13.04□□□□□ -0.32
DDX41-204ENST00000504807 DYNLT1P63172 113 aa13.04□□□□□ -0.32
DDX41-204ENST00000504807 NR1D2Q14995 579 aa13.04□□□□□ -0.32
DDX41-204ENST00000504807 AMZ1Q400G9 498 aa13.04□□□□□ -0.32
DDX41-204ENST00000504807 HENMT1Q5T8I9 393 aaKnown RBP13.04□□□□□ -0.32
DDX41-204ENST00000504807 MFSD7Q6UXD7 560 aa13.04□□□□□ -0.32
DDX41-204ENST00000504807 ZNF765Q7L2R6 523 aa13.04□□□□□ -0.32
DDX41-204ENST00000504807 LYSMD3Q7Z3D4 306 aa13.04□□□□□ -0.32
DDX41-204ENST00000504807 FBXO39Q8N4B4 442 aa13.04□□□□□ -0.32
DDX41-204ENST00000504807 RCBTB1Q8NDN9 531 aa13.04□□□□□ -0.32
DDX41-204ENST00000504807 SPATA22Q8NHS9 363 aa13.04□□□□□ -0.32
DDX41-204ENST00000504807 WDR48Q8TAF3 677 aa13.04□□□□□ -0.32
DDX41-204ENST00000504807 GRAMD1AQ96CP6 724 aa13.04□□□□□ -0.32
DDX41-204ENST00000504807 IMP4Q96G21 291 aaKnown RBP13.04□□□□□ -0.32
DDX41-204ENST00000504807 PHF12Q96QT6 1004 aa13.04□□□□□ -0.32
DDX41-204ENST00000504807 LYSMD1Q96S90 227 aa13.04□□□□□ -0.32
DDX41-204ENST00000504807 HERPUD2Q9BSE4 406 aa13.04□□□□□ -0.32
DDX41-204ENST00000504807 TMPRSS11EQ9UL52 423 aa13.04□□□□□ -0.32
DDX41-204ENST00000504807 PLAAQ9Y263 795 aa13.04□□□□□ -0.32
DDX41-204ENST00000504807 SPO11Q9Y5K1 396 aa13.04□□□□□ -0.32
DDX41-204ENST00000504807 ARHGEF17Q96PE2 2063 aaPredicted RBP13.04□□□□□ -0.32
DDX41-204ENST00000504807 PRAMEF33A0A0G2JMD5 474 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 C1orf232A0A0U1RR37 186 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 A6NCN8 305 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 C9orf172C9J069 976 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 AURKAO14965 403 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 PRAMEF10O60809 474 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 MT-CYBP00156 380 aaPredicted RBP13.03□□□□□ -0.32
DDX41-204ENST00000504807 PNLIPP16233 465 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 COMTP21964 271 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 MPSTP25325 297 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms