RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 EIF2DP41214 584 aaKnown RBP5.48□□□□□ -1.53
TRAPPC13-206ENST00000504751 APOBEC1P41238 236 aaKnown RBP5.48□□□□□ -1.53
TRAPPC13-206ENST00000504751 RAD52P43351 418 aa5.48□□□□□ -1.53
TRAPPC13-206ENST00000504751 MRPL12P52815 198 aaKnown RBP5.48□□□□□ -1.53
TRAPPC13-206ENST00000504751 LTBQ06643 244 aa5.48□□□□□ -1.53
TRAPPC13-206ENST00000504751 FOXM1Q08050 763 aa5.48□□□□□ -1.53
TRAPPC13-206ENST00000504751 SPOCK1Q08629 439 aa5.48□□□□□ -1.53
TRAPPC13-206ENST00000504751 STK4Q13043 487 aa5.48□□□□□ -1.53
TRAPPC13-206ENST00000504751 MYBPHQ13203 477 aa5.48□□□□□ -1.53
TRAPPC13-206ENST00000504751 HIST3H2AQ7L7L0 130 aa5.48□□□□□ -1.53
TRAPPC13-206ENST00000504751 TAGAPQ8N103 731 aa5.48□□□□□ -1.53
TRAPPC13-206ENST00000504751 NME8Q8N427 588 aa5.48□□□□□ -1.53
TRAPPC13-206ENST00000504751 IQCF1Q8N6M8 205 aa5.48□□□□□ -1.53
TRAPPC13-206ENST00000504751 IL17RCQ8NAC3 791 aa5.48□□□□□ -1.53
TRAPPC13-206ENST00000504751 NEUROG1Q92886 237 aa5.48□□□□□ -1.53
TRAPPC13-206ENST00000504751 SAT2Q96F10 170 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC13-206ENST00000504751 SCMH1Q96GD3 660 aa5.48□□□□□ -1.53
TRAPPC13-206ENST00000504751 FIZ1Q96SL8 496 aa5.48□□□□□ -1.53
TRAPPC13-206ENST00000504751 CENPOQ9BU64 300 aa5.48□□□□□ -1.53
TRAPPC13-206ENST00000504751 C1QTNF1Q9BXJ1 281 aa5.48□□□□□ -1.53
TRAPPC13-206ENST00000504751 SEZ6LQ9BYH1 1024 aa5.48□□□□□ -1.53
TRAPPC13-206ENST00000504751 PCDH9Q9HC56 1237 aa5.48□□□□□ -1.53
TRAPPC13-206ENST00000504751 OCIAD1Q9NX40 245 aa5.48□□□□□ -1.53
TRAPPC13-206ENST00000504751 SNX9Q9Y5X1 595 aa5.48□□□□□ -1.53
TRAPPC13-206ENST00000504751 CTDSP2O14595 271 aa5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 BEST1O76090 585 aa5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 KDM4BO94953 1096 aa5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 NGFRP08138 427 aa5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 FCGR1AP12314 374 aa5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 CDKN2AP42771 156 aaKnown RBP5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 THBS3P49746 956 aa5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 FOXG1P55316 489 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 TAS2R38P59533 333 aa5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 MRPS5P82675 430 aaKnown RBP5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 CDC16Q13042 620 aa5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 MAD2L1Q13257 205 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 CALCRLQ16602 461 aa5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 KCNT1Q5JUK3 1230 aa5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 DCST1Q5T197 706 aa5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 NSUN5P2Q63ZY6 315 aa5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 RHBDF2Q6PJF5 856 aa5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 BRAT1Q6PJG6 821 aa5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 ATG9AQ7Z3C6 839 aa5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 GLCCI1Q86VQ1 547 aa5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 LINC00346Q8IVM7 164 aa5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 POC5Q8NA72 575 aa5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 ACVR1CQ8NER5 493 aa5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 TMEM204Q9BSN7 226 aa5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 HRH4Q9H3N8 390 aa5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 MCM9Q9NXL9 1143 aa5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 ZNF224Q9NZL3 707 aa5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 PADI1Q9ULC6 663 aa5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 EXO1Q9UQ84 846 aaKnown RBP5.47□□□□□ -1.53
TRAPPC13-206ENST00000504751 IGLV5-37A0A075B6J1 123 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 OR2A25A4D2G3 310 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 EIF4E1BA6NMX2 242 aaKnown RBP5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 INSIG1O15503 277 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 CLDN14O95500 239 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 STARD3NLO95772 234 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 LINC00271P0C7V0 271 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 PDLIM4P50479 330 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 SEC61A1P61619 476 aaKnown RBP5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 KIF5AQ12840 1032 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 GRSF1Q12849 480 aaKnown RBP eCLIP5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 KCTD2Q14681 263 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 PCLAFQ15004 111 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 RGMBQ6NW40 437 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 PAPD4Q6PIY7 484 aaKnown RBP5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 CCNI2Q6ZMN8 369 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 SPATA2LQ8IUW3 424 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 SCYL3Q8IZE3 742 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 SCML4Q8N228 414 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 HMGCLL1Q8TB92 370 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 HM13Q8TCT9 377 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 MAGEC3Q8TD91 643 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 SLC22A18Q96BI1 424 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 MTBPQ96DY7 904 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 C3orf30Q96M34 536 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 NEUROD6Q96NK8 337 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 CMKLR1Q99788 373 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 SIL1Q9H173 461 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 PDE7BQ9NP56 450 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 ANKEF1Q9NU02 776 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 CLIC5Q9NZA1 410 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 CHORDC1Q9UHD1 332 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 RPS6KA6Q9UK32 745 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 LOXL2Q9Y4K0 774 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 TMEM184BQ9Y519 407 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 NFS1Q9Y697 457 aa5.46□□□□□ -1.54
TRAPPC13-206ENST00000504751 FAM90A26D6RGX4 464 aa5.45□□□□□ -1.54
TRAPPC13-206ENST00000504751 PROB1E7EW31 1015 aa5.45□□□□□ -1.54
TRAPPC13-206ENST00000504751 MID1O15344 667 aa5.45□□□□□ -1.54
TRAPPC13-206ENST00000504751 TMCC2O75069 709 aa5.45□□□□□ -1.54
TRAPPC13-206ENST00000504751 GPC4O75487 556 aa5.45□□□□□ -1.54
TRAPPC13-206ENST00000504751 ERAL1O75616 437 aaKnown RBP5.45□□□□□ -1.54
TRAPPC13-206ENST00000504751 MMP9P14780 707 aa5.45□□□□□ -1.54
TRAPPC13-206ENST00000504751 AKR1B1P15121 316 aa5.45□□□□□ -1.54
TRAPPC13-206ENST00000504751 UGT1A1P22309 533 aa5.45□□□□□ -1.54
TRAPPC13-206ENST00000504751 MSH2P43246 934 aa5.45□□□□□ -1.54
TRAPPC13-206ENST00000504751 NRIP1P48552 1158 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms