RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 GPR3P46089 330 aa9.03□□□□□ -0.96
DHFR-202ENST00000504396 POLD2P49005 469 aa9.03□□□□□ -0.96
DHFR-202ENST00000504396 PAPOLAP51003 745 aaKnown RBP9.03□□□□□ -0.96
DHFR-202ENST00000504396 COPB1P53618 953 aaKnown RBP9.03□□□□□ -0.96
DHFR-202ENST00000504396 CDK3Q00526 305 aa9.03□□□□□ -0.96
DHFR-202ENST00000504396 NSUN2Q08J23 767 aaKnown RBP eCLIP9.03□□□□□ -0.96
DHFR-202ENST00000504396 SWI5Q1ZZU3 235 aa9.03□□□□□ -0.96
DHFR-202ENST00000504396 CT47A1Q5JQC4 288 aaPredicted RBP9.03□□□□□ -0.96
DHFR-202ENST00000504396 AFMIDQ63HM1 303 aa9.03□□□□□ -0.96
DHFR-202ENST00000504396 MARK2Q7KZI7 788 aaKnown RBP9.03□□□□□ -0.96
DHFR-202ENST00000504396 C17orf82Q86X59 251 aaPredicted RBP9.03□□□□□ -0.96
DHFR-202ENST00000504396 NRROSQ86YC3 692 aa9.03□□□□□ -0.96
DHFR-202ENST00000504396 PHF13Q86YI8 300 aaPredicted RBP9.03□□□□□ -0.96
DHFR-202ENST00000504396 NLGN4XQ8N0W4 816 aa9.03□□□□□ -0.96
DHFR-202ENST00000504396 NLGN4YQ8NFZ3 816 aaPredicted RBP9.03□□□□□ -0.96
DHFR-202ENST00000504396 OR10G6Q8NH81 332 aa9.03□□□□□ -0.96
DHFR-202ENST00000504396 ECHDC3Q96DC8 303 aa9.03□□□□□ -0.96
DHFR-202ENST00000504396 EFHD1Q9BUP0 239 aa9.03□□□□□ -0.96
DHFR-202ENST00000504396 SLC39A8Q9C0K1 460 aa9.03□□□□□ -0.96
DHFR-202ENST00000504396 NLRC4Q9NPP4 1024 aa9.03□□□□□ -0.96
DHFR-202ENST00000504396 FAM207AQ9NSI2 230 aaPredicted RBP9.03□□□□□ -0.96
DHFR-202ENST00000504396 GPATCH2LQ9NWQ4 482 aa9.03□□□□□ -0.96
DHFR-202ENST00000504396 TRNAU1APQ9NX07 287 aaKnown RBP9.03□□□□□ -0.96
DHFR-202ENST00000504396 TAB2Q9NYJ8 693 aa9.03□□□□□ -0.96
DHFR-202ENST00000504396 CHMP5Q9NZZ3 219 aa9.03□□□□□ -0.96
DHFR-202ENST00000504396 KLHL3Q9UH77 587 aa9.03□□□□□ -0.96
DHFR-202ENST00000504396 FZD10Q9ULW2 581 aa9.03□□□□□ -0.96
DHFR-202ENST00000504396 ELOA3CA0A087WX78 387 aaPredicted RBP9.02□□□□□ -0.97
DHFR-202ENST00000504396 PRR19A6NJB7 356 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 ELOA3DA6NLF2 546 aaPredicted RBP9.02□□□□□ -0.97
DHFR-202ENST00000504396 SIGLEC16A6NMB1 481 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 PPM1DO15297 605 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 CPP00450 1065 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 CEACAM5P06731 702 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 TPM2P07951 284 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 UNGP13051 313 aaPredicted RBP9.02□□□□□ -0.97
DHFR-202ENST00000504396 GM2AP17900 193 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 TCN2P20062 427 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 MAP4P27816 1152 aaKnown RBP9.02□□□□□ -0.97
DHFR-202ENST00000504396 VIPR1P32241 457 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 SOX5P35711 763 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 ADCY8P40145 1251 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 ETV3P41162 512 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 ZNF143P52747 638 aaPredicted RBP9.02□□□□□ -0.97
DHFR-202ENST00000504396 POLR2FP61218 127 aaKnown RBP9.02□□□□□ -0.97
DHFR-202ENST00000504396 UBE2HP62256 183 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 PTP4A2Q12974 167 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 SQSTM1Q13501 440 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 ZNF235Q14590 738 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 RFTN1Q14699 578 aaPredicted RBP9.02□□□□□ -0.97
DHFR-202ENST00000504396 CNGA3Q16281 694 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 ELOA3BQ3SY89 546 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 ATP1A1-AS1Q5TC04 95 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 TMEM71Q6P5X7 295 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 DCUN1D2Q6PH85 259 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 CEACAM20Q6UY09 585 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 NAGSQ8N159 534 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 ELOA3Q8NG57 546 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 FNIP1Q8TF40 1166 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 APOBEC4Q8WW27 367 aaKnown RBP9.02□□□□□ -0.97
DHFR-202ENST00000504396 STARD8Q92502 1023 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 RNF31Q96EP0 1072 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 SLC45A3Q96JT2 553 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 TEFMQ96QE5 360 aaKnown RBP9.02□□□□□ -0.97
DHFR-202ENST00000504396 OR2M4Q96R27 311 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 VPS16Q9H269 839 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 DHX35Q9H5Z1 703 aaKnown RBP9.02□□□□□ -0.97
DHFR-202ENST00000504396 LRRC19Q9H756 370 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 DMGDHQ9UI17 866 aaKnown RBP9.02□□□□□ -0.97
DHFR-202ENST00000504396 AP4E1Q9UPM8 1137 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 BSNQ9UPA5 3926 aa9.02□□□□□ -0.97
DHFR-202ENST00000504396 LOC101059948A0A1B0GTJ6 334 aa9.01□□□□□ -0.97
DHFR-202ENST00000504396 B4E171 279 aa9.01□□□□□ -0.97
DHFR-202ENST00000504396 MTSS1O43312 755 aa9.01□□□□□ -0.97
DHFR-202ENST00000504396 MAP3K6O95382 1288 aa9.01□□□□□ -0.97
DHFR-202ENST00000504396 CYP2A6P11509 494 aaPredicted RBP9.01□□□□□ -0.97
DHFR-202ENST00000504396 CHRNB2P17787 502 aa9.01□□□□□ -0.97
DHFR-202ENST00000504396 NR1D1P20393 614 aa9.01□□□□□ -0.97
DHFR-202ENST00000504396 COL8A1P27658 744 aa9.01□□□□□ -0.97
DHFR-202ENST00000504396 TEAD1P28347 426 aa9.01□□□□□ -0.97
DHFR-202ENST00000504396 OAS2P29728 719 aaKnown RBP9.01□□□□□ -0.97
DHFR-202ENST00000504396 TSPAN7P41732 249 aa9.01□□□□□ -0.97
DHFR-202ENST00000504396 GPR1P46091 355 aa9.01□□□□□ -0.97
DHFR-202ENST00000504396 KLK7P49862 253 aa9.01□□□□□ -0.97
DHFR-202ENST00000504396 RENBPP51606 427 aa9.01□□□□□ -0.97
DHFR-202ENST00000504396 ZNF135P52742 658 aaPredicted RBP9.01□□□□□ -0.97
DHFR-202ENST00000504396 AP1S1P61966 158 aa9.01□□□□□ -0.97
DHFR-202ENST00000504396 GPLD1P80108 840 aa9.01□□□□□ -0.97
DHFR-202ENST00000504396 MC1RQ01726 317 aa9.01□□□□□ -0.97
DHFR-202ENST00000504396 KLRB1Q12918 225 aa9.01□□□□□ -0.97
DHFR-202ENST00000504396 NFATC2Q13469 925 aa9.01□□□□□ -0.97
DHFR-202ENST00000504396 DPCR1Q3MIW9 517 aa9.01□□□□□ -0.97
DHFR-202ENST00000504396 PPP6R3Q5H9R7 873 aaPredicted RBP9.01□□□□□ -0.97
DHFR-202ENST00000504396 TMCO4Q5TGY1 634 aa9.01□□□□□ -0.97
DHFR-202ENST00000504396 PPP1R2P3Q6NXS1 205 aa9.01□□□□□ -0.97
DHFR-202ENST00000504396 ARHGAP36Q6ZRI8 547 aa9.01□□□□□ -0.97
DHFR-202ENST00000504396 TRIM74Q86UV6 250 aa9.01□□□□□ -0.97
DHFR-202ENST00000504396 TEX19Q8NA77 164 aa9.01□□□□□ -0.97
DHFR-202ENST00000504396 RTP4Q96DX8 246 aa9.01□□□□□ -0.97
DHFR-202ENST00000504396 COQ10AQ96MF6 247 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms