RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 KLF6Q99612 283 aaPredicted RBP9.99□□□□□ -0.81
NUP54-203ENST00000504173 NUSAP1Q9BXS6 441 aaKnown RBP9.99□□□□□ -0.81
NUP54-203ENST00000504173 ABCG8Q9H221 673 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 TM9SF3Q9HD45 589 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 BPIFA1Q9NP55 256 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 RAD18Q9NS91 495 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 SYBUQ9NX95 663 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 IL17CQ9P0M4 197 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 WHRNQ9P202 907 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 SUSD2Q9UGT4 822 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 PILRBQ9UKJ0 227 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 CA5BQ9Y2D0 317 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 SLCO1B1Q9Y6L6 691 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 MGAQ8IWI9 3026 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 DOCK9Q9BZ29 2069 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 GON4LQ3T8J9 2241 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 A0A1B0GTW7 788 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 TEX51A0A1B0GUA7 166 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 ESYT3A0FGR9 886 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 CCDC78A2IDD5 438 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 A6NNZ2 444 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 LDB2O43679 373 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 AVILO75366 819 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 BPIP17213 487 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 ENGP17813 658 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 ADRA1DP25100 572 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 HOXD12P35452 270 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 SPAM1P38567 509 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 ZNF140P52738 457 aaPredicted RBP9.98□□□□□ -0.81
NUP54-203ENST00000504173 CLDN2P57739 230 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 DCDC1P59894 354 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 RACK1P63244 317 aaKnown RBP9.98□□□□□ -0.81
NUP54-203ENST00000504173 CRADDP78560 199 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 TMPRSS15P98073 1019 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 GUCY2DQ02846 1103 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 PTPRCAPQ14761 206 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 TEAD4Q15561 434 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 TRIM61Q5EBN2 209 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 DNAJC21Q5F1R6 531 aaKnown RBP9.98□□□□□ -0.81
NUP54-203ENST00000504173 PCID2Q5JVF3 399 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 TEX35Q5T0J7 233 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 ZDHHC20Q5W0Z9 365 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 RAET1GQ6H3X3 334 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 ESRP1Q6NXG1 681 aaKnown RBP9.98□□□□□ -0.81
NUP54-203ENST00000504173 CASC4Q6P4E1 433 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 GCNT7Q6ZNI0 430 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 ZNF765Q7L2R6 523 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 PTAR1Q7Z6K3 402 aaPredicted RBP9.98□□□□□ -0.81
NUP54-203ENST00000504173 OR4K2Q8NGD2 314 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 OR13C4Q8NGS5 318 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 STYXQ8WUJ0 223 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 SCAMP4Q969E2 229 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 CENPTQ96BT3 561 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 RANBP9Q96S59 729 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 RIOK2Q9BVS4 552 aaKnown RBP9.98□□□□□ -0.81
NUP54-203ENST00000504173 FRMD8Q9BZ67 464 aaPredicted RBP9.98□□□□□ -0.81
NUP54-203ENST00000504173 IL22Q9GZX6 179 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 CDH19Q9H159 772 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 FAM83DQ9H4H8 585 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 EPB41L5Q9HCM4 733 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 MBNL1Q9NR56 388 aaKnown RBP9.98□□□□□ -0.81
NUP54-203ENST00000504173 SAMD15Q9P1V8 674 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 FNDC3AQ9Y2H6 1198 aaKnown RBP9.98□□□□□ -0.81
NUP54-203ENST00000504173 TCAF1Q9Y4C2 921 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 KCTD3Q9Y597 815 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 HS3ST3A1Q9Y663 406 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 TNRC6BQ9UPQ9 1833 aaKnown RBP9.98□□□□□ -0.81
NUP54-203ENST00000504173 PLXNA2O75051 1894 aa9.98□□□□□ -0.81
NUP54-203ENST00000504173 MYLKQ15746 1914 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 POM121BA6NF01 834 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 SDR42E2A6NKP2 422 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 H0Y8X5 98 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 PPFIA2O75334 1257 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 SLU7O95391 586 aaKnown RBP9.97□□□□□ -0.81
NUP54-203ENST00000504173 CFIP05156 583 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 RHOXF2BP0C7M4 288 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 FTH1P19P0C7X4 201 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 TSHRP16473 764 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 CD38P28907 300 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 HADHAP40939 763 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 MAGEA3P43357 314 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 GPR1P46091 355 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 AFF3P51826 1226 aaKnown RBP9.97□□□□□ -0.81
NUP54-203ENST00000504173 DRG2P55039 364 aaKnown RBP9.97□□□□□ -0.81
NUP54-203ENST00000504173 PLTPP55058 493 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 ARL4CP56559 192 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 C21orf59P57076 290 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 CAV1Q03135 178 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 DPTQ07507 201 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 TRIP6Q15654 476 aaKnown RBP9.97□□□□□ -0.81
NUP54-203ENST00000504173 HIF1AQ16665 826 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 DUOXA1Q1HG43 343 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 SKIDA1Q1XH10 827 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 BBS9Q3SYG4 887 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 TSTD2Q5T7W7 516 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 HENMT1Q5T8I9 393 aaKnown RBP9.97□□□□□ -0.81
NUP54-203ENST00000504173 PEAR1Q5VY43 1037 aaPredicted RBP9.97□□□□□ -0.81
NUP54-203ENST00000504173 PNCKQ6P2M8 343 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 SLC23A3Q6PIS1 610 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 LAYNQ6UX15 382 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms