RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 FAM163BP0C2L3 166 aa16.1■□□□□ 0.17
HMGXB3-202ENST00000503427 NELFEP18615 380 aaKnown RBP16.1■□□□□ 0.17
HMGXB3-202ENST00000503427 CORO1AP31146 461 aaKnown RBP16.1■□□□□ 0.17
HMGXB3-202ENST00000503427 SLC26A3P40879 764 aa16.1■□□□□ 0.17
HMGXB3-202ENST00000503427 OR52L1Q8NGH7 329 aa16.1■□□□□ 0.17
HMGXB3-202ENST00000503427 PSMA8Q8TAA3 256 aa16.1■□□□□ 0.17
HMGXB3-202ENST00000503427 TDRD1Q9BXT4 1180 aaKnown RBP16.1■□□□□ 0.17
HMGXB3-202ENST00000503427 WDR12Q9GZL7 423 aaKnown RBP16.1■□□□□ 0.17
HMGXB3-202ENST00000503427 A0A1W2PQ67 120 aa16.1■□□□□ 0.17
HMGXB3-202ENST00000503427 PRMT5O14744 637 aaPredicted RBP16.1■□□□□ 0.17
HMGXB3-202ENST00000503427 OR6B1O95007 311 aa16.1■□□□□ 0.17
HMGXB3-202ENST00000503427 KHDC1Q4VXA5 237 aaKnown RBP16.1■□□□□ 0.17
HMGXB3-202ENST00000503427 VARS2Q5ST30 1063 aaKnown RBP16.1■□□□□ 0.17
HMGXB3-202ENST00000503427 RAET1GQ6H3X3 334 aa16.1■□□□□ 0.17
HMGXB3-202ENST00000503427 GLYATQ6IB77 296 aa16.1■□□□□ 0.17
HMGXB3-202ENST00000503427 ZNF567Q8N184 647 aa16.1■□□□□ 0.17
HMGXB3-202ENST00000503427 ZNF671Q8TAW3 534 aa16.1■□□□□ 0.17
HMGXB3-202ENST00000503427 TIMMDC1Q9NPL8 285 aa16.1■□□□□ 0.17
HMGXB3-202ENST00000503427 RWDD3Q9Y3V2 267 aa16.1■□□□□ 0.17
HMGXB3-202ENST00000503427 CTPS1P17812 591 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 POLR2JP52435 117 aaKnown RBP16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 UGT2B15P54855 530 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 VWA5B1Q5TIE3 1220 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 RNF220Q5VTB9 566 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 SPPL2CQ8IUH8 684 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 SLCO2A1Q92959 643 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 MYO19Q96H55 970 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 EIF2B3Q9NR50 452 aaKnown RBP16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 FGBP02675 491 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 SP100P23497 879 aaPredicted RBP16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 TLX1P31314 330 aaPredicted RBP16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 GNPDA1P46926 289 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 JAG1P78504 1218 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 SPIBQ01892 262 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 ACAP2Q15057 778 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 FAM81AQ8TBF8 368 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 TWIST2Q8WVJ9 160 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 TIFAQ96CG3 184 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 MFSD3Q96ES6 412 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 MRPL39Q9NYK5 338 aaKnown RBP16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 SLC9A8Q9Y2E8 581 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 MYBPHLA2RUH7 354 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 KCNU1A8MYU2 1149 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 LRIG2O94898 1065 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 C1RP00736 705 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 MAPKAPK2P49137 400 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 RALGDSQ12967 914 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 PPIGQ13427 754 aaKnown RBP eCLIP16.09■□□□□ 0.173e-7■■■■□ 21
HMGXB3-202ENST00000503427 GPR158Q5T848 1215 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 GPR156Q8NFN8 814 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 BRD9Q9H8M2 597 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 TCAF1Q9Y4C2 921 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 LYVE1Q9Y5Y7 322 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 ACSL4O60488 711 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 UGT2B11O75310 529 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 UMPSP11172 480 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 CREB1P16220 341 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 ACLYP53396 1101 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 PLPP4Q5VZY2 271 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 FSTL4Q6MZW2 842 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 FAM151BQ6UXP7 276 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 IKBIPQ70UQ0 350 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 CFAP52Q8N1V2 620 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 OR8D1Q8WZ84 308 aa16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 NDRG1Q92597 394 aaKnown RBP16.09■□□□□ 0.17
HMGXB3-202ENST00000503427 NPEPPSL1A6NEC2 478 aa16.08■□□□□ 0.17
HMGXB3-202ENST00000503427 NDST3O95803 873 aa16.08■□□□□ 0.17
HMGXB3-202ENST00000503427 IL1BP01584 269 aa16.08■□□□□ 0.17
HMGXB3-202ENST00000503427 NR2F1P10589 423 aa16.08■□□□□ 0.17
HMGXB3-202ENST00000503427 SP2Q02086 613 aa16.08■□□□□ 0.17
HMGXB3-202ENST00000503427 TAPT1Q6NXT6 567 aa16.08■□□□□ 0.17
HMGXB3-202ENST00000503427 UXS1Q8NBZ7 420 aa16.08■□□□□ 0.17
HMGXB3-202ENST00000503427 GIPC3Q8TF64 312 aa16.08■□□□□ 0.17
HMGXB3-202ENST00000503427 OMA1Q96E52 524 aa16.08■□□□□ 0.17
HMGXB3-202ENST00000503427 GTF2IRD1Q9UHL9 959 aa16.08■□□□□ 0.17
HMGXB3-202ENST00000503427 SERPINB7O75635 380 aa16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 ATP12AP54707 1039 aa16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 LSM12Q3MHD2 195 aaKnown RBP16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 HLA-DQA1Q5Y7H0 255 aa16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 RHBDF2Q6PJF5 856 aa16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 FAM20CQ8IXL6 584 aa16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 STYXQ8WUJ0 223 aa16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 GATA5Q9BWX5 397 aaPredicted RBP16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 VIRMAQ69YN4 1812 aaKnown RBP16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 SCNN1AP37088 669 aa16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 STAT5AP42229 794 aa16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 TAC4Q86UU9 113 aa16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 CCDC185Q8N715 623 aa16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 NIPA2Q8N8Q9 360 aa16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 MCRS1Q96EZ8 462 aa16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 GINS4Q9BRT9 223 aa16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 MAGEH1Q9H213 219 aa16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 FBXL21Q9UKT6 434 aa16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 DPPA5A6NC42 116 aa16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 LRATO95237 230 aa16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 SLC6A2P23975 617 aa16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 IDH3AP50213 366 aa16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 AP5B1Q2VPB7 878 aa16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 DENND5AQ6IQ26 1287 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms