RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	FAM151B	Q6UXP7	276 aa		12.08	□□□□□ -0.48
MATR3-231	ENST00000502394	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	12.08	□□□□□ -0.48
MATR3-231	ENST00000502394	LDB1	Q86U70	411 aa	Predicted RBP	12.08	□□□□□ -0.48
MATR3-231	ENST00000502394	KBTBD6	Q86V97	674 aa		12.08	□□□□□ -0.48
MATR3-231	ENST00000502394	EXOC3L1	Q86VI1	746 aa		12.08	□□□□□ -0.48
MATR3-231	ENST00000502394	ACVR1C	Q8NER5	493 aa		12.08	□□□□□ -0.48
MATR3-231	ENST00000502394	GABPB2	Q8TAK5	448 aa	Predicted RBP	12.08	□□□□□ -0.48
MATR3-231	ENST00000502394	LPGAT1	Q92604	370 aa		12.08	□□□□□ -0.48
MATR3-231	ENST00000502394	MTBP	Q96DY7	904 aa		12.08	□□□□□ -0.48
MATR3-231	ENST00000502394	VPS39	Q96JC1	886 aa		12.08	□□□□□ -0.48
MATR3-231	ENST00000502394	NECAB3	Q96P71	396 aa	Predicted RBP	12.08	□□□□□ -0.48
MATR3-231	ENST00000502394	WRAP53	Q9BUR4	548 aa	Known RBP	12.08	□□□□□ -0.48
MATR3-231	ENST00000502394	PRR14	Q9BWN1	585 aa		12.08	□□□□□ -0.48
MATR3-231	ENST00000502394	POLM	Q9NP87	494 aa	Predicted RBP	12.08	□□□□□ -0.48
MATR3-231	ENST00000502394	FBXO6	Q9NRD1	293 aa	Predicted RBP	12.08	□□□□□ -0.48
MATR3-231	ENST00000502394	INTS10	Q9NVR2	710 aa	Known RBP	12.08	□□□□□ -0.48
MATR3-231	ENST00000502394	EBF1	Q9UH73	591 aa		12.08	□□□□□ -0.48
MATR3-231	ENST00000502394	NOVA2	Q9UNW9	492 aa	Known RBP	12.08	□□□□□ -0.48
MATR3-231	ENST00000502394	ZFR2	Q9UPR6	939 aa	Known RBP	12.08	□□□□□ -0.48
MATR3-231	ENST00000502394	ACTL7B	Q9Y614	415 aa		12.08	□□□□□ -0.48
MATR3-231	ENST00000502394	IKBKG	Q9Y6K9	419 aa		12.08	□□□□□ -0.48
MATR3-231	ENST00000502394	SLC30A1	Q9Y6M5	507 aa		12.08	□□□□□ -0.48
MATR3-231	ENST00000502394	LRRK1	Q38SD2	2015 aa		12.08	□□□□□ -0.48
MATR3-231	ENST00000502394	IGLV3-16	A0A075B6K0	115 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394		A0A1W2PPM1	405 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	WNT9A	O14904	365 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	MMP20	O60882	483 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	RFPL1	O75677	317 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	RNASEH2A	O75792	299 aa	Known RBP	12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	KRT37	O76014	449 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	RECQL5	O94762	991 aa	Predicted RBP	12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	SOD1	P00441	154 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	ALDOA	P04075	364 aa	Known RBP	12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	UGT1A6	P19224	532 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	ITGAL	P20701	1170 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	UGT1A1	P22309	533 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	UGT1A4	P22310	534 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	UGT1A3	P35503	534 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	UGT1A5	P35504	534 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	CCNF	P41002	786 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	ABCG1	P45844	678 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	CLCN5	P51795	746 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	ADAR	P55265	1226 aa	Known RBP	12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	SLC18A2	Q05940	514 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	DPT	Q07507	201 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	GPS2	Q13227	327 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	BMPR2	Q13873	1038 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	DBN1	Q16643	649 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	TTC31	Q49AM3	519 aa	Predicted RBP	12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	ATP13A5	Q4VNC0	1218 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	TMEM259	Q4ZIN3	620 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	ZRANB3	Q5FWF4	1079 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	AARS2	Q5JTZ9	985 aa	Known RBP	12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	LGSN	Q5TDP6	509 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	CWF19L1	Q69YN2	538 aa	Known RBP	12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	CERS6	Q6ZMG9	384 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	SPEM1	Q8N4L4	309 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	DCLK2	Q8N568	766 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	TRAM1L1	Q8N609	369 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	ZNF398	Q8TD17	642 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	CXorf40A	Q8TE69	158 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	SCAMP4	Q969E2	229 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	SERAC1	Q96JX3	654 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	OMD	Q99983	421 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	STMN4	Q9H169	189 aa	Predicted RBP	12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	KDM4C	Q9H3R0	1056 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	FAM83D	Q9H4H8	585 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	FAM96A	Q9H5X1	160 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	ASB8	Q9H765	288 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	PREB	Q9HCU5	417 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	CD93	Q9NPY3	652 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	ITM2C	Q9NQX7	267 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	SENP1	Q9P0U3	644 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	DLGAP2	Q9P1A6	1054 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	CORO1C	Q9ULV4	474 aa	Predicted RBP	12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	MTO1	Q9Y2Z2	717 aa	Known RBP	12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	COQ6	Q9Y2Z9	468 aa		12.07	□□□□□ -0.48
MATR3-231	ENST00000502394	PLXNB3	Q9ULL4	1909 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	FADS2P1	A8MWK0	482 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	WISP3	O95389	354 aa	Predicted RBP	12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	CREB1	P16220	341 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	RPS3	P23396	243 aa	Known RBP eCLIP	12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	ACRV1	P26436	265 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	ATP5D	P30049	168 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	POLD2	P49005	469 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	TTPA	P49638	278 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	TPMT	P51580	245 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	MAGOH	P61326	146 aa	Known RBP	12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	TIAL1	Q01085	375 aa	Known RBP eCLIP	12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	SIGLEC14	Q08ET2	396 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	SFSWAP	Q12872	951 aa	Known RBP	12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	ITGA9	Q13797	1035 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	FGL2	Q14314	439 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	ITIH4	Q14624	930 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	ACOX1	Q15067	660 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	ZKSCAN8	Q15776	578 aa	Predicted RBP	12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	HSP90B2P	Q58FF3	399 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	RBM20	Q5T481	1227 aa	Known RBP	12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	RNF187	Q5TA31	235 aa	Predicted RBP	12.06	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms