RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 SCRT2Q9NQ03 307 aa2.42□□□□□ -2.02
SMAD1-203ENST00000502342 FBXL2Q9UKC9 423 aa2.42□□□□□ -2.02
SMAD1-203ENST00000502342 ADAM18Q9Y3Q7 739 aa2.42□□□□□ -2.02
SMAD1-203ENST00000502342 MAU2Q9Y6X3 613 aa2.42□□□□□ -2.02
SMAD1-203ENST00000502342 PTPRCP08575 1304 aa2.42□□□□□ -2.02
SMAD1-203ENST00000502342 KDM3AQ9Y4C1 1321 aa2.42□□□□□ -2.02
SMAD1-203ENST00000502342 FAM72CH0Y354 149 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 ZNHIT1O43257 154 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 TGFB1I1O43294 461 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 SLC25A12O75746 678 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 KCNK5O95279 499 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 MLYCDO95822 493 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 POLR2CP19387 275 aaPredicted RBP2.41□□□□□ -2.02
SMAD1-203ENST00000502342 ANOS1P23352 680 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 MARK3P27448 753 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 ICAM3P32942 547 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 HOXA1P49639 335 aaPredicted RBP2.41□□□□□ -2.02
SMAD1-203ENST00000502342 F2RL1P55085 397 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 PITX1P78337 314 aaPredicted RBP2.41□□□□□ -2.02
SMAD1-203ENST00000502342 COG7P83436 770 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 CDC16Q13042 620 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 MAD2L1Q13257 205 aaPredicted RBP2.41□□□□□ -2.02
SMAD1-203ENST00000502342 ZNF234Q14588 700 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 NAB2Q15742 525 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 MYLK3Q32MK0 819 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 HSP90AB4PQ58FF6 505 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 FAM72AQ5TYM5 149 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 FRG2Q64ET8 278 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 PLA2G4FQ68DD2 849 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 FAM72DQ6L9T8 149 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 BRAT1Q6PJG6 821 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 C19orf48Q6RUI8 117 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 GSG1LQ6UXU4 331 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 MMS22LQ6ZRQ5 1243 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 DPPA4Q7L190 304 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 NFE4Q86UQ8 179 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 FAM72BQ86X60 149 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 KLHDC8BQ8IXV7 354 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 DIS3L2Q8IYB7 885 aaKnown RBP2.41□□□□□ -2.02
SMAD1-203ENST00000502342 SRBD1Q8N5C6 995 aaKnown RBP2.41□□□□□ -2.02
SMAD1-203ENST00000502342 ACVR1CQ8NER5 493 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 OR5R1Q8NH85 324 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 ETNPPLQ8TBG4 499 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 FAM149B1Q96BN6 582 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 PPP1R13BQ96KQ4 1090 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 DUX3Q96PT4 197 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 SMC6Q96SB8 1091 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 NEURL2Q9BR09 285 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 SLC26A6Q9BXS9 759 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 LRMDAQ9H2I8 198 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 RANGRFQ9HD47 186 aaPredicted RBP2.41□□□□□ -2.02
SMAD1-203ENST00000502342 KLHL1Q9NR64 748 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 OR14J1Q9UGF5 321 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 GJD2Q9UKL4 321 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 ACSL5Q9ULC5 683 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 R3HDM2Q9Y2K5 976 aaKnown RBP2.41□□□□□ -2.02
SMAD1-203ENST00000502342 RUSC2Q8N2Y8 1516 aa2.41□□□□□ -2.02
SMAD1-203ENST00000502342 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 FAM237BA0A1B0GVD1 139 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 EIF4E1BA6NMX2 242 aaKnown RBP2.4□□□□□ -2.03
SMAD1-203ENST00000502342 H3BQ06 376 aaPredicted RBP2.4□□□□□ -2.03
SMAD1-203ENST00000502342 M0QZ24 198 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 JRKO75564 520 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 AMBPP02760 352 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 HSPA1AP0DMV8 641 aaKnown RBP2.4□□□□□ -2.03
SMAD1-203ENST00000502342 HSPA1BP0DMV9 641 aaKnown RBP2.4□□□□□ -2.03
SMAD1-203ENST00000502342 UBA1P22314 1058 aaKnown RBP2.4□□□□□ -2.03
SMAD1-203ENST00000502342 NFKBIAP25963 317 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 HOXC9P31274 260 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 ELF1P32519 619 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 KRT9P35527 623 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 PRCPP42785 496 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 FASLGP48023 281 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 CCR9P51686 369 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 PLIN5Q00G26 463 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 CEBPZQ03701 1054 aaKnown RBP2.4□□□□□ -2.03
SMAD1-203ENST00000502342 SREBF2Q12772 1141 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 PDE1CQ14123 709 aaPredicted RBP2.4□□□□□ -2.03
SMAD1-203ENST00000502342 DECR1Q16698 335 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 KIF26BQ2KJY2 2108 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 ALFQ53S48 1182 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 CXorf66Q5JRM2 361 aaPredicted RBP2.4□□□□□ -2.03
SMAD1-203ENST00000502342 SIRPB2Q5JXA9 342 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 SLC24A4Q8NFF2 622 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 OR52I2Q8NH67 350 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 GRAPLQ8TC17 118 aaPredicted RBP2.4□□□□□ -2.03
SMAD1-203ENST00000502342 UTP15Q8TED0 518 aaKnown RBP2.4□□□□□ -2.03
SMAD1-203ENST00000502342 SLC38A5Q8WUX1 472 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 ZKSCAN4Q969J2 545 aaPredicted RBP2.4□□□□□ -2.03
SMAD1-203ENST00000502342 TAAR8Q969N4 342 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 MMABQ96EY8 250 aaPredicted RBP2.4□□□□□ -2.03
SMAD1-203ENST00000502342 LINGO1Q96FE5 620 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 STAMBPL1Q96FJ0 436 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 WDFY2Q96P53 400 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 MAP7D2Q96T17 732 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 SEMA3CQ99985 751 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 SMC4Q9NTJ3 1288 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 TCP11L1Q9NUJ3 509 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 ABI3Q9P2A4 366 aa2.4□□□□□ -2.03
SMAD1-203ENST00000502342 TCF19Q9Y242 345 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms