RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 CLCNKAP51800 687 aa16.71■□□□□ 0.27
TRAPPC3-207ENST00000497251 SLC25A11Q02978 314 aaKnown RBP16.71■□□□□ 0.27
TRAPPC3-207ENST00000497251 HHEXQ03014 270 aa16.71■□□□□ 0.27
TRAPPC3-207ENST00000497251 ABHD18Q0P651 414 aa16.71■□□□□ 0.27
TRAPPC3-207ENST00000497251 PDK2Q15119 407 aa16.71■□□□□ 0.27
TRAPPC3-207ENST00000497251 NKAIN2Q5VXU1 208 aa16.71■□□□□ 0.27
TRAPPC3-207ENST00000497251 IYDQ6PHW0 289 aa16.71■□□□□ 0.27
TRAPPC3-207ENST00000497251 DOK6Q6PKX4 331 aa16.71■□□□□ 0.27
TRAPPC3-207ENST00000497251 NLGN4XQ8N0W4 816 aa16.71■□□□□ 0.27
TRAPPC3-207ENST00000497251 NLGN4YQ8NFZ3 816 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC3-207ENST00000497251 CCHCR1Q8TD31 782 aa16.71■□□□□ 0.27
TRAPPC3-207ENST00000497251 SCAMP4Q969E2 229 aa16.71■□□□□ 0.27
TRAPPC3-207ENST00000497251 TDRD1Q9BXT4 1180 aaKnown RBP16.71■□□□□ 0.27
TRAPPC3-207ENST00000497251 SPRY4Q9C004 299 aa16.71■□□□□ 0.27
TRAPPC3-207ENST00000497251 UCK1Q9HA47 277 aa16.71■□□□□ 0.27
TRAPPC3-207ENST00000497251 CBX8Q9HC52 389 aa16.71■□□□□ 0.27
TRAPPC3-207ENST00000497251 ZNHIT2Q9UHR6 403 aa16.71■□□□□ 0.27
TRAPPC3-207ENST00000497251 ANAPC2Q9UJX6 822 aa16.71■□□□□ 0.27
TRAPPC3-207ENST00000497251 TMEM98Q9Y2Y6 226 aa16.71■□□□□ 0.27
TRAPPC3-207ENST00000497251 ZFC3H1O60293 1989 aaKnown RBP16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 A0A1W2PQJ5 194 aa16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 EFCAB7A8K855 629 aa16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 ASMTLO95671 621 aa16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 CYP1A2P05177 515 aa16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 IL4RP24394 825 aa16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 KCNAB2Q13303 367 aa16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 MAP7Q14244 749 aa16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 ANKRD20A8PQ5CZ79 823 aa16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 E4F1Q66K89 784 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 LYSMD3Q7Z3D4 306 aa16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 FAM129CQ86XR2 697 aa16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 PLXDC1Q8IUK5 500 aa16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 BMPERQ8N8U9 685 aa16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 ZNF564Q8TBZ8 553 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 PTCD2Q8WV60 388 aaKnown RBP16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 RTP4Q96DX8 246 aa16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 ZNF670Q9BS34 389 aa16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 RIOK2Q9BVS4 552 aaKnown RBP16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 ADGRE3Q9BY15 652 aa16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 ZMYND15Q9H091 742 aa16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 CARD9Q9H257 536 aa16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 FAM83DQ9H4H8 585 aa16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 RAD18Q9NS91 495 aa16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 RBM22Q9NW64 420 aaKnown RBP eCLIP16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 PKD2L2Q9NZM6 624 aa16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 ANAPC7Q9UJX3 599 aa16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 TMEM184BQ9Y519 407 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC3-207ENST00000497251 TOX3O15405 576 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC3-207ENST00000497251 DNAJC6O75061 913 aa16.69■□□□□ 0.26
TRAPPC3-207ENST00000497251 SERPINC1P01008 464 aa16.69■□□□□ 0.26
TRAPPC3-207ENST00000497251 ANKRD34CP0C6C1 535 aa16.69■□□□□ 0.26
TRAPPC3-207ENST00000497251 F3P13726 295 aa16.69■□□□□ 0.26
TRAPPC3-207ENST00000497251 LIFP15018 202 aa16.69■□□□□ 0.26
TRAPPC3-207ENST00000497251 SPINT3P49223 89 aa16.69■□□□□ 0.26
TRAPPC3-207ENST00000497251 POLE2P56282 527 aa16.69■□□□□ 0.26
TRAPPC3-207ENST00000497251 CYP4F2P78329 520 aa16.69■□□□□ 0.26
TRAPPC3-207ENST00000497251 NR1I3Q14994 352 aa16.69■□□□□ 0.26
TRAPPC3-207ENST00000497251 CLCA4Q14CN2 919 aa16.69■□□□□ 0.26
TRAPPC3-207ENST00000497251 TDRD12Q587J7 1177 aaKnown RBP16.69■□□□□ 0.26
TRAPPC3-207ENST00000497251 HENMT1Q5T8I9 393 aaKnown RBP16.69■□□□□ 0.26
TRAPPC3-207ENST00000497251 XPO4Q9C0E2 1151 aaKnown RBP16.69■□□□□ 0.26
TRAPPC3-207ENST00000497251 GPN2Q9H9Y4 310 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC3-207ENST00000497251 PCDH9Q9HC56 1237 aa16.69■□□□□ 0.26
TRAPPC3-207ENST00000497251 OCIAD1Q9NX40 245 aa16.69■□□□□ 0.26
TRAPPC3-207ENST00000497251 CD84Q9UIB8 345 aa16.69■□□□□ 0.26
TRAPPC3-207ENST00000497251 BSNQ9UPA5 3926 aa16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 LILRA5A6NI73 299 aa16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 ANKRD66B4E2M5 251 aa16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 AGRPO00253 132 aa16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 MAP3K6O95382 1288 aa16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 SERPING1P05155 500 aa16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 KRT7P08729 469 aa16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 SKILP12757 684 aa16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 TCF4P15884 667 aa16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 PPM1FP49593 454 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 ARSEP51690 589 aa16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 ANKS6Q68DC2 871 aa16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 PDPK2PQ6A1A2 396 aa16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 MARK2Q7KZI7 788 aaKnown RBP16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 LUZP1Q86V48 1076 aa16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 PHYKPLQ8IUZ5 450 aa16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 JPH3Q8WXH2 748 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 NAP1L5Q96NT1 182 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 SRPK1Q96SB4 655 aaKnown RBP16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 MLPHQ9BV36 600 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 NUP85Q9BW27 656 aa16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 THAP2Q9H0W7 228 aa16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 CNOT6Q9ULM6 557 aaKnown RBP16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 CHKBQ9Y259 395 aa16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 PLEKHM1Q9Y4G2 1056 aa16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 DOPEY2Q9Y3R5 2298 aa16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 FLNCQ14315 2725 aa16.68■□□□□ 0.26
TRAPPC3-207ENST00000497251 A6NCN8 305 aa16.67■□□□□ 0.26
TRAPPC3-207ENST00000497251 GOLGA6L19H0YKK7 550 aa16.67■□□□□ 0.26
TRAPPC3-207ENST00000497251 NUAK1O60285 661 aa16.67■□□□□ 0.26
TRAPPC3-207ENST00000497251 CLDN7O95471 211 aa16.67■□□□□ 0.26
TRAPPC3-207ENST00000497251 PRLP01236 227 aa16.67■□□□□ 0.26
TRAPPC3-207ENST00000497251 DPYSL3Q14195 570 aa16.67■□□□□ 0.26
TRAPPC3-207ENST00000497251 HGSNATQ68CP4 663 aa16.67■□□□□ 0.26
TRAPPC3-207ENST00000497251 TXNRD3NBQ6F5E7 133 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms