RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 DCST1Q5T197 706 aa3.68□□□□□ -1.82
CD46-218ENST00000496723 STPG1Q5TH74 334 aa3.68□□□□□ -1.82
CD46-218ENST00000496723 BRAT1Q6PJG6 821 aa3.68□□□□□ -1.82
CD46-218ENST00000496723 CYP20A1Q6UW02 462 aa3.68□□□□□ -1.82
CD46-218ENST00000496723 SMIM29Q86T20 159 aa3.68□□□□□ -1.82
CD46-218ENST00000496723 SRBD1Q8N5C6 995 aaKnown RBP3.68□□□□□ -1.82
CD46-218ENST00000496723 FRMD1Q8N878 549 aa3.68□□□□□ -1.82
CD46-218ENST00000496723 LMNTD1Q8N9Z9 388 aa3.68□□□□□ -1.82
CD46-218ENST00000496723 ACVR1CQ8NER5 493 aa3.68□□□□□ -1.82
CD46-218ENST00000496723 OR13A1Q8NGR1 328 aa3.68□□□□□ -1.82
CD46-218ENST00000496723 TDRD7Q8NHU6 1098 aaKnown RBP3.68□□□□□ -1.82
CD46-218ENST00000496723 PIGTQ969N2 578 aa3.68□□□□□ -1.82
CD46-218ENST00000496723 WBP2Q969T9 261 aa3.68□□□□□ -1.82
CD46-218ENST00000496723 ARHGEF26Q96DR7 871 aa3.68□□□□□ -1.82
CD46-218ENST00000496723 WDFY2Q96P53 400 aa3.68□□□□□ -1.82
CD46-218ENST00000496723 QRFPRQ96P65 431 aa3.68□□□□□ -1.82
CD46-218ENST00000496723 POLR1BQ9H9Y6 1135 aa3.68□□□□□ -1.82
CD46-218ENST00000496723 SDF2L1Q9HCN8 221 aa3.68□□□□□ -1.82
CD46-218ENST00000496723 RANGRFQ9HD47 186 aaPredicted RBP3.68□□□□□ -1.82
CD46-218ENST00000496723 LTB4R2Q9NPC1 389 aa3.68□□□□□ -1.82
CD46-218ENST00000496723 KLHL1Q9NR64 748 aa3.68□□□□□ -1.82
CD46-218ENST00000496723 ABCF3Q9NUQ8 709 aa3.68□□□□□ -1.82
CD46-218ENST00000496723 OR14J1Q9UGF5 321 aa3.68□□□□□ -1.82
CD46-218ENST00000496723 LIMA1Q9UHB6 759 aaKnown RBP3.68□□□□□ -1.82
CD46-218ENST00000496723 ACSL5Q9ULC5 683 aa3.68□□□□□ -1.82
CD46-218ENST00000496723 PADI3Q9ULW8 664 aa3.68□□□□□ -1.82
CD46-218ENST00000496723 KLHL20Q9Y2M5 609 aa3.68□□□□□ -1.82
CD46-218ENST00000496723 OR2W1Q9Y3N9 320 aa3.68□□□□□ -1.82
CD46-218ENST00000496723 PTPRCP08575 1304 aa3.68□□□□□ -1.82
CD46-218ENST00000496723 A0A1W2PS18 150 aa3.67□□□□□ -1.82
CD46-218ENST00000496723 M0QZ24 198 aa3.67□□□□□ -1.82
CD46-218ENST00000496723 JRKO75564 520 aa3.67□□□□□ -1.82
CD46-218ENST00000496723 SLC25A12O75746 678 aa3.67□□□□□ -1.82
CD46-218ENST00000496723 TMEM63AO94886 807 aa3.67□□□□□ -1.82
CD46-218ENST00000496723 ATP1A1P05023 1023 aaKnown RBP3.67□□□□□ -1.82
CD46-218ENST00000496723 UBA1P22314 1058 aaKnown RBP3.67□□□□□ -1.82
CD46-218ENST00000496723 MAD2L1Q13257 205 aaPredicted RBP3.67□□□□□ -1.82
CD46-218ENST00000496723 GTF2H2Q13888 395 aa3.67□□□□□ -1.82
CD46-218ENST00000496723 RBBP5Q15291 538 aaKnown RBP3.67□□□□□ -1.82
CD46-218ENST00000496723 DECR1Q16698 335 aa3.67□□□□□ -1.82
CD46-218ENST00000496723 TTI2Q6NXR4 508 aa3.67□□□□□ -1.82
CD46-218ENST00000496723 GTF2H2CQ6P1K8 395 aa3.67□□□□□ -1.82
CD46-218ENST00000496723 ASB18Q6ZVZ8 466 aa3.67□□□□□ -1.82
CD46-218ENST00000496723 GPR180Q86V85 440 aa3.67□□□□□ -1.82
CD46-218ENST00000496723 NRROSQ86YC3 692 aa3.67□□□□□ -1.82
CD46-218ENST00000496723 PAF1Q8N7H5 531 aa3.67□□□□□ -1.82
CD46-218ENST00000496723 IL17RCQ8NAC3 791 aa3.67□□□□□ -1.82
CD46-218ENST00000496723 OR5R1Q8NH85 324 aa3.67□□□□□ -1.82
CD46-218ENST00000496723 UCMAQ8WVF2 138 aa3.67□□□□□ -1.82
CD46-218ENST00000496723 TAAR8Q969N4 342 aa3.67□□□□□ -1.82
CD46-218ENST00000496723 C7orf26Q96N11 449 aa3.67□□□□□ -1.82
CD46-218ENST00000496723 SYT17Q9BSW7 474 aa3.67□□□□□ -1.82
CD46-218ENST00000496723 FBXL2Q9UKC9 423 aa3.67□□□□□ -1.82
CD46-218ENST00000496723 B4E171 279 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 HS3ST1O14792 307 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 ATP2A1O14983 1001 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 MBD4O95243 580 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 CCNDBP1O95273 360 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 CD4P01730 458 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 NFKBIAP25963 317 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 APOBEC1P41238 236 aaKnown RBP3.66□□□□□ -1.82
CD46-218ENST00000496723 TSPAN7P41732 249 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 FMO5P49326 533 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 AMPHP49418 695 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 CDC16Q13042 620 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 ZNF234Q14588 700 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 MED22Q15528 200 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 ACCSLQ4AC99 568 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 TMEM35AQ53FP2 167 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 STXBP5Q5T5C0 1151 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 C18orf63Q68DL7 685 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 MEX3BQ6ZN04 569 aaKnown RBP3.66□□□□□ -1.82
CD46-218ENST00000496723 TMTC3Q6ZXV5 915 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 DCUN1D3Q8IWE4 304 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 ARHGAP12Q8IWW6 846 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 SLC38A5Q8WUX1 472 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 MMP28Q9H239 520 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 ZFP57Q9NU63 452 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 EHD2Q9NZN4 543 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 ORC3Q9UBD5 711 aaPredicted RBP3.66□□□□□ -1.82
CD46-218ENST00000496723 COPG2Q9UBF2 871 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 AASSQ9UDR5 926 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 ADAM18Q9Y3Q7 739 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 PIAS3Q9Y6X2 628 aa3.66□□□□□ -1.82
CD46-218ENST00000496723 CAPN9O14815 690 aa3.65□□□□□ -1.83
CD46-218ENST00000496723 KCNN4O15554 427 aa3.65□□□□□ -1.83
CD46-218ENST00000496723 ZNHIT1O43257 154 aa3.65□□□□□ -1.83
CD46-218ENST00000496723 EPB41L2O43491 1005 aaKnown RBP3.65□□□□□ -1.83
CD46-218ENST00000496723 FGF17O60258 216 aa3.65□□□□□ -1.83
CD46-218ENST00000496723 WDR1O75083 606 aa3.65□□□□□ -1.83
CD46-218ENST00000496723 NDUFS3O75489 264 aa3.65□□□□□ -1.83
CD46-218ENST00000496723 EIF2S1P05198 315 aaKnown RBP3.65□□□□□ -1.83
CD46-218ENST00000496723 POLR2CP19387 275 aaPredicted RBP3.65□□□□□ -1.83
CD46-218ENST00000496723 MARK3P27448 753 aa3.65□□□□□ -1.83
CD46-218ENST00000496723 UBA7P41226 1012 aa3.65□□□□□ -1.83
CD46-218ENST00000496723 PRCPP42785 496 aa3.65□□□□□ -1.83
CD46-218ENST00000496723 CLDN20P56880 219 aa3.65□□□□□ -1.83
CD46-218ENST00000496723 EEF1A1P68104 462 aaKnown RBP3.65□□□□□ -1.83
CD46-218ENST00000496723 PITX1P78337 314 aaPredicted RBP3.65□□□□□ -1.83
CD46-218ENST00000496723 NIPAL4Q0D2K0 466 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms