RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	FASLG	P48023	281 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	CSNK1D	P48730	415 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	SEPHS1	P49903	392 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	NDST2	P52849	883 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	PMS2	P54278	862 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	MAX	P61244	160 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	AP1S1	P61966	158 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	RPL7A	P62424	266 aa	Known RBP	7.78	□□□□□ -1.16
NVL-223	ENST00000496393	SH3BP2	P78314	561 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	SLC10A7	Q0GE19	358 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	TRAF2	Q12933	501 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	MRPL49	Q13405	166 aa	Known RBP	7.78	□□□□□ -1.16
NVL-223	ENST00000496393	SQSTM1	Q13501	440 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	ZNF235	Q14590	738 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	NADK2	Q4G0N4	442 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	PYCR3	Q53H96	274 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	7.78	□□□□□ -1.16
NVL-223	ENST00000496393	CPZ	Q66K79	652 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	TCTN3	Q6NUS6	607 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	DNAJC24	Q6P3W2	148 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	FAM114A1	Q8IWE2	563 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	ARHGAP12	Q8IWW6	846 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	SFRP1	Q8N474	314 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	C3orf20	Q8ND61	904 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	SCAMP4	Q969E2	229 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	STAMBPL1	Q96FJ0	436 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	AGAP2	Q99490	1192 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	ZPBP	Q9BS86	351 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	STK33	Q9BYT3	514 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	TWSG1	Q9GZX9	223 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	VPS16	Q9H269	839 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	TRIT1	Q9H3H1	467 aa	Known RBP	7.78	□□□□□ -1.16
NVL-223	ENST00000496393	NLRC4	Q9NPP4	1024 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	FBXO8	Q9NRD0	319 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	SIDT1	Q9NXL6	827 aa	Known RBP	7.78	□□□□□ -1.16
NVL-223	ENST00000496393	TAB2	Q9NYJ8	693 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	MAP10	Q9P2G4	905 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	TBC1D29	Q9UFV1	150 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	LNPEP	Q9UIQ6	1025 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	SRPK3	Q9UPE1	567 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	AP4E1	Q9UPM8	1137 aa		7.78	□□□□□ -1.16
NVL-223	ENST00000496393	ABCA12	Q86UK0	2595 aa		7.77	□□□□□ -1.16
NVL-223	ENST00000496393	SHANK1	Q9Y566	2161 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	PIPSL	A2A3N6	862 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	EPHB6	O15197	1021 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	DAPK3	O43293	454 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	KIAA0754	O94854	1291 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	ATP1A1	P05023	1023 aa	Known RBP	7.77	□□□□□ -1.17
NVL-223	ENST00000496393	CYP2A6	P11509	494 aa	Predicted RBP	7.77	□□□□□ -1.17
NVL-223	ENST00000496393	UNG	P13051	313 aa	Predicted RBP	7.77	□□□□□ -1.17
NVL-223	ENST00000496393	ACP5	P13686	325 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	TYRP1	P17643	537 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	CASP14	P31944	242 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	DCT	P40126	519 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	ZNF143	P52747	638 aa	Predicted RBP	7.77	□□□□□ -1.17
NVL-223	ENST00000496393	POLR2F	P61218	127 aa	Known RBP	7.77	□□□□□ -1.17
NVL-223	ENST00000496393	OGDH	Q02218	1023 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	PEX6	Q13608	980 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	ESPL1	Q14674	2120 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	LBR	Q14739	615 aa	Known RBP	7.77	□□□□□ -1.17
NVL-223	ENST00000496393	CLEC16A	Q2KHT3	1053 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	EIF2S3L	Q2VIR3	472 aa	Known RBP	7.77	□□□□□ -1.17
NVL-223	ENST00000496393	PPP6R3	Q5H9R7	873 aa	Predicted RBP	7.77	□□□□□ -1.17
NVL-223	ENST00000496393	TMCO4	Q5TGY1	634 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	WDR74	Q6RFH5	385 aa	Predicted RBP	7.77	□□□□□ -1.17
NVL-223	ENST00000496393	C6orf15	Q6UXA7	325 aa	Predicted RBP	7.77	□□□□□ -1.17
NVL-223	ENST00000496393	CHST15	Q7LFX5	561 aa	Predicted RBP	7.77	□□□□□ -1.17
NVL-223	ENST00000496393	ZNF677	Q86XU0	584 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	RASGRP3	Q8IV61	690 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	PGBD5	Q8N414	524 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	GALNT11	Q8NCW6	608 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	AP2M1	Q96CW1	435 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	TGM7	Q96PF1	710 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	OR6C1	Q96RD1	312 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	KCTD15	Q96SI1	283 aa	Predicted RBP	7.77	□□□□□ -1.17
NVL-223	ENST00000496393	RUFY1	Q96T51	708 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	ABCG8	Q9H221	673 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	GAN	Q9H2C0	597 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	STN1	Q9H668	368 aa	Known RBP	7.77	□□□□□ -1.17
NVL-223	ENST00000496393	NOD2	Q9HC29	1040 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	SARS2	Q9NP81	518 aa	Known RBP	7.77	□□□□□ -1.17
NVL-223	ENST00000496393	FAM207A	Q9NSI2	230 aa	Predicted RBP	7.77	□□□□□ -1.17
NVL-223	ENST00000496393	CNOT8	Q9UFF9	292 aa	Known RBP	7.77	□□□□□ -1.17
NVL-223	ENST00000496393	PCSK1N	Q9UHG2	260 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	ZNHIT2	Q9UHR6	403 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	KCND3	Q9UK17	655 aa		7.77	□□□□□ -1.17
NVL-223	ENST00000496393	LRBA	P50851	2863 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393	HIVEP3	Q5T1R4	2406 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	7.76	□□□□□ -1.17
NVL-223	ENST00000496393	ANKRD62	A6NC57	917 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393		A6NCN8	305 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393	SIGLEC16	A6NMB1	481 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393	HTRA2	O43464	458 aa	Predicted RBP	7.76	□□□□□ -1.17
NVL-223	ENST00000496393	SOCS5	O75159	536 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393	NDUFA10	O95299	355 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393	CALB1	P05937	261 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393	ERCC2	P18074	760 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393	SOX5	P35711	763 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393	LEPR	P48357	1165 aa	Known RBP	7.76	□□□□□ -1.17
NVL-223	ENST00000496393	PGD	P52209	483 aa		7.76	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms