RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 NHEJ1Q9H9Q4 299 aaPredicted RBP11.56□□□□□ -0.56
VTI1A-208ENST00000494728 KCTD5Q9NXV2 234 aa11.56□□□□□ -0.56
VTI1A-208ENST00000494728 AMACRQ9UHK6 382 aa11.56□□□□□ -0.56
VTI1A-208ENST00000494728 NBASA2RRP1 2371 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 PRRC2CQ9Y520 2896 aaKnown RBP11.55□□□□□ -0.56
VTI1A-208ENST00000494728 TRBV23OR9-2A0A075B6M9 112 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 IGHV1OR21-1A0A087WYE8 117 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 A6NCN8 305 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 RHPN2P1A8MT19 583 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 ANKRD66B4E2M5 251 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 AKR1B10O60218 316 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 SLC4A1P02730 911 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 PECAM1P16284 738 aaPredicted RBP11.55□□□□□ -0.56
VTI1A-208ENST00000494728 MX2P20592 715 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 NFKBIAP25963 317 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 MARCKSL1P49006 195 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 SPINT3P49223 89 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 DYNLT1P63172 113 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 RHDQ02161 417 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 ADCY2Q08462 1091 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 NOMO1Q15155 1222 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 LLGL1Q15334 1064 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 ZFYVE27Q5T4F4 411 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 KDELC2Q7Z4H8 507 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 NLRP8Q86W28 1048 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 GALNT13Q8IUC8 556 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 MAP7D3Q8IWC1 876 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 LSM14AQ8ND56 463 aaKnown RBP11.55□□□□□ -0.56
VTI1A-208ENST00000494728 USP7Q93009 1102 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 TADA1Q96BN2 335 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 DEF6Q9H4E7 631 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 WDR70Q9NW82 654 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 SAE1Q9UBE0 346 aaPredicted RBP11.55□□□□□ -0.56
VTI1A-208ENST00000494728 TBC1D29Q9UFV1 150 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 TFR2Q9UP52 801 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 KCNK6Q9Y257 313 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 ADGRG1Q9Y653 693 aa11.55□□□□□ -0.56
VTI1A-208ENST00000494728 ZNF487B1APH4 448 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 TMX2-CTNND1H3BSU7 103 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 NVLO15381 856 aaKnown RBP11.54□□□□□ -0.56
VTI1A-208ENST00000494728 ASMTLO95671 621 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 MT-CYBP00156 380 aaPredicted RBP11.54□□□□□ -0.56
VTI1A-208ENST00000494728 THRAP10827 490 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 LIPCP11150 499 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 FGF3P11487 239 aaPredicted RBP11.54□□□□□ -0.56
VTI1A-208ENST00000494728 ACP5P13686 325 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 TNNT1P13805 278 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 PLA2G2AP14555 144 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 RPL26P61254 145 aaKnown RBP11.54□□□□□ -0.56
VTI1A-208ENST00000494728 C19orf57Q0VDD7 668 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 AP1B1Q10567 949 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 TBX2Q13207 712 aaPredicted RBP11.54□□□□□ -0.56
VTI1A-208ENST00000494728 TRIM14Q14142 442 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 PCSK7Q16549 785 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 KHDC1Q4VXA5 237 aaKnown RBP11.54□□□□□ -0.56
VTI1A-208ENST00000494728 TAF1BQ53T94 588 aaPredicted RBP11.54□□□□□ -0.56
VTI1A-208ENST00000494728 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.54□□□□□ -0.56
VTI1A-208ENST00000494728 ALS2CLQ60I27 953 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 MFSD7Q6UXD7 560 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 CCDC81Q6ZN84 652 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 CHST15Q7LFX5 561 aaPredicted RBP11.54□□□□□ -0.56
VTI1A-208ENST00000494728 PIM3Q86V86 326 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 DTX1Q86Y01 620 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 NRSN1Q8IZ57 195 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 SFRP1Q8N474 314 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 GPR26Q8NDV2 337 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 EXD1Q8NHP7 514 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 SPATA22Q8NHS9 363 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 JPH3Q8WXH2 748 aaPredicted RBP11.54□□□□□ -0.56
VTI1A-208ENST00000494728 RNF25Q96BH1 459 aaPredicted RBP11.54□□□□□ -0.56
VTI1A-208ENST00000494728 CCDC97Q96F63 343 aaPredicted RBP11.54□□□□□ -0.56
VTI1A-208ENST00000494728 IMP4Q96G21 291 aaKnown RBP11.54□□□□□ -0.56
VTI1A-208ENST00000494728 AGAP3Q96P47 875 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 CCNL2Q96S94 520 aaPredicted RBP11.54□□□□□ -0.56
VTI1A-208ENST00000494728 SEPT10Q9P0V9 454 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 RPL26L1Q9UNX3 145 aaKnown RBP11.54□□□□□ -0.56
VTI1A-208ENST00000494728 SHOC2Q9UQ13 582 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 SPO11Q9Y5K1 396 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 LRRK2Q5S007 2527 aa11.54□□□□□ -0.56
VTI1A-208ENST00000494728 F5H423 210 aaPredicted RBP11.53□□□□□ -0.56
VTI1A-208ENST00000494728 APOL1O14791 398 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 AURKAO14965 403 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 CBFA2T2O43439 604 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 TPM3P06753 285 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 ZNF8P17098 575 aaPredicted RBP11.53□□□□□ -0.56
VTI1A-208ENST00000494728 CA4P22748 312 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 CES1P23141 567 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 CD68P34810 354 aaPredicted RBP11.53□□□□□ -0.56
VTI1A-208ENST00000494728 CDKN2BP42772 138 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 GPR3P46089 330 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 FASLGP48023 281 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 LIMK2P53671 638 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 PRKD1Q15139 912 aaPredicted RBP11.53□□□□□ -0.56
VTI1A-208ENST00000494728 TAZQ16635 292 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 RFX6Q8HWS3 928 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 NDUFAF2Q8N183 169 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 HTR3CQ8WXA8 447 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 ZNF830Q96NB3 372 aaPredicted RBP11.53□□□□□ -0.56
VTI1A-208ENST00000494728 CMKLR1Q99788 373 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 MLPHQ9BV36 600 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms