RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 DOK6Q6PKX4 331 aa13.44□□□□□ -0.26
COL1A1-208ENST00000494334 FAM151BQ6UXP7 276 aa13.44□□□□□ -0.26
COL1A1-208ENST00000494334 KLHL7Q8IXQ5 586 aa13.44□□□□□ -0.26
COL1A1-208ENST00000494334 GLYATL1Q969I3 302 aa13.44□□□□□ -0.26
COL1A1-208ENST00000494334 SCARF2Q96GP6 870 aaPredicted RBP13.44□□□□□ -0.26
COL1A1-208ENST00000494334 C19orf43Q9BQ61 176 aa13.44□□□□□ -0.26
COL1A1-208ENST00000494334 CARS2Q9HA77 564 aaKnown RBP13.44□□□□□ -0.26
COL1A1-208ENST00000494334 PCYOX1Q9UHG3 505 aa13.44□□□□□ -0.26
COL1A1-208ENST00000494334 FKBPLQ9UIM3 349 aa13.44□□□□□ -0.26
COL1A1-208ENST00000494334 TMPRSS11EQ9UL52 423 aa13.44□□□□□ -0.26
COL1A1-208ENST00000494334 SUFUQ9UMX1 484 aa13.44□□□□□ -0.26
COL1A1-208ENST00000494334 CSNK1G3Q9Y6M4 447 aa13.44□□□□□ -0.26
COL1A1-208ENST00000494334 CCDC188H7C350 402 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 TRIM38O00635 465 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 FFAR2O15552 330 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 UGT1A9O60656 530 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 SLC25A14O95258 325 aaPredicted RBP13.43□□□□□ -0.26
COL1A1-208ENST00000494334 ASMTLO95671 621 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 GAS8O95995 478 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 IVLP07476 585 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 UGT1A6P19224 532 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 UGT1A1P22309 533 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 UGT1A4P22310 534 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 CA5AP35218 305 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 UGT1A3P35503 534 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 UGT1A5P35504 534 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 PTGIRP43119 386 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 MAGEA6P43360 314 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 TMPRSS15P98073 1019 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 XIAPP98170 497 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 KCNJ11Q14654 390 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 TRIP6Q15654 476 aaKnown RBP13.43□□□□□ -0.26
COL1A1-208ENST00000494334 ZNF648Q5T619 568 aaPredicted RBP13.43□□□□□ -0.26
COL1A1-208ENST00000494334 PSAPL1Q6NUJ1 521 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 ZNF534Q76KX8 674 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 DGLUCYQ7Z3D6 616 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 FSTL5Q8N475 847 aaPredicted RBP13.43□□□□□ -0.26
COL1A1-208ENST00000494334 OR4C6Q8NH72 309 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 CPT1BQ92523 772 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 SLCO2A1Q92959 643 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 DNAJC1Q96KC8 554 aaKnown RBP13.43□□□□□ -0.26
COL1A1-208ENST00000494334 VPS35Q96QK1 796 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 TMEM168Q9H0V1 697 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 UGT1A7Q9HAW7 530 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 UGT1A10Q9HAW8 530 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 UGT1A8Q9HAW9 530 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 ARFGAP3Q9NP61 516 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 NLGN3Q9NZ94 848 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 VPS18Q9P253 973 aa13.43□□□□□ -0.26
COL1A1-208ENST00000494334 TP53BP1Q12888 1972 aaPredicted RBP13.43□□□□□ -0.26
COL1A1-208ENST00000494334 DMXL1Q9Y485 3027 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 DCHS1Q96JQ0 3298 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 MROH6A6NGR9 719 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 LMO7DNF2Z398 122 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 TPP1O14773 563 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 YY2O15391 372 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 GPR39O43194 453 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 SIGLEC6O43699 453 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 DNAJC6O75061 913 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 SRP72O76094 671 aaKnown RBP13.42□□□□□ -0.26
COL1A1-208ENST00000494334 LDOC1O95751 146 aaPredicted RBP13.42□□□□□ -0.26
COL1A1-208ENST00000494334 HADHAP40939 763 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 GNPDA1P46926 289 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 CDK16Q00536 496 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 PEX6Q13608 980 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 ITGA9Q13797 1035 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 SEPT6Q14141 434 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 ELOCQ15369 112 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 PPP1R7Q15435 360 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 TCEA2Q15560 299 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 DEFB133Q30KQ1 61 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 CCDC38Q502W7 563 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 PPM1JQ5JR12 505 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 ANKRD22Q5VYY1 191 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 LRRC8BQ6P9F7 803 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 MARK2Q7KZI7 788 aaKnown RBP13.42□□□□□ -0.26
COL1A1-208ENST00000494334 CCL4L1Q8NHW4 92 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 ZNF398Q8TD17 642 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 STYXQ8WUJ0 223 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 CNDP2Q96KP4 475 aaKnown RBP13.42□□□□□ -0.26
COL1A1-208ENST00000494334 RUNDC3BQ96NL0 473 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 RANBP9Q96S59 729 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 CDC6Q99741 560 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 DUSP23Q9BVJ7 150 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 SUDS3Q9H7L9 328 aaPredicted RBP13.42□□□□□ -0.26
COL1A1-208ENST00000494334 TRIM39Q9HCM9 518 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 NLE1Q9NVX2 485 aaPredicted RBP13.42□□□□□ -0.26
COL1A1-208ENST00000494334 ATXN10Q9UBB4 475 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 APPL1Q9UKG1 709 aa13.42□□□□□ -0.26
COL1A1-208ENST00000494334 PCYT1BQ9Y5K3 369 aaPredicted RBP13.42□□□□□ -0.26
COL1A1-208ENST00000494334 SPAARA0A1B0GVQ0 90 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 HEATR9A2RTY3 570 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 H7C0S8 307 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 AP3B1O00203 1094 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 CCL22O00626 93 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 TNFSF14O43557 240 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 NUAK1O60285 661 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 MTX2O75431 263 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 TMEM63AO94886 807 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 PRAMEF1O95521 474 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms