RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 PPHLN1Q8NEY8 458 aaKnown RBP10.04□□□□□ -0.8
RFC2-211ENST00000494019 GDAP1Q8TB36 358 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 LMX1AQ8TE12 382 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 SAP25Q8TEE9 199 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 SETD7Q8WTS6 366 aaKnown RBP10.04□□□□□ -0.8
RFC2-211ENST00000494019 BTN2A2Q8WVV5 523 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 OR1E3Q8WZA6 343 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 GLYATL1Q969I3 302 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 COX14Q96I36 57 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 DNAJC1Q96KC8 554 aaKnown RBP10.04□□□□□ -0.8
RFC2-211ENST00000494019 LRRC61Q9BV99 259 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 FRMD8Q9BZ67 464 aaPredicted RBP10.04□□□□□ -0.8
RFC2-211ENST00000494019 CARS2Q9HA77 564 aaKnown RBP10.04□□□□□ -0.8
RFC2-211ENST00000494019 CYP4F12Q9HCS2 524 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 ARFGAP3Q9NP61 516 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 IL26Q9NPH9 171 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 UCKL1Q9NWZ5 548 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 CDC23Q9UJX2 597 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 BTBD3Q9Y2F9 522 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 TMEM98Q9Y2Y6 226 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 PCDHGB2Q9Y5G2 931 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 PTPRZ1P23471 2315 aaPredicted RBP10.04□□□□□ -0.8
RFC2-211ENST00000494019 ARID1BQ8NFD5 2236 aaPredicted RBP10.03□□□□□ -0.8
RFC2-211ENST00000494019 GOLGA8MH3BSY2 632 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 AP3B1O00203 1094 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 GAPDHSO14556 408 aaPredicted RBP10.03□□□□□ -0.8
RFC2-211ENST00000494019 DNALI1O14645 258 aaPredicted RBP10.03□□□□□ -0.8
RFC2-211ENST00000494019 TNFRSF10CO14798 259 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 AQP9O43315 295 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 SH3BP5O60239 455 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 SLC25A14O95258 325 aaPredicted RBP10.03□□□□□ -0.8
RFC2-211ENST00000494019 TNFP01375 233 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 CEACAM5P06731 702 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 CTSEP14091 401 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 KCNA4P22459 653 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 DGKAP23743 735 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 GRK6P43250 576 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 GNPDA1P46926 289 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 POLD2P49005 469 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 CRADDP78560 199 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 C1orf61Q13536 156 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 CHRNA6Q15825 494 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 WHAMMP3Q1A5X7 153 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 IZUMO3Q5VZ72 239 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 LRRC8BQ6P9F7 803 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 MARK2Q7KZI7 788 aaKnown RBP10.03□□□□□ -0.8
RFC2-211ENST00000494019 PPIL6Q8IXY8 311 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 DEFB124Q8NES8 71 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 KIF18AQ8NI77 898 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 STYXQ8WUJ0 223 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 PTCD2Q8WV60 388 aaKnown RBP10.03□□□□□ -0.8
RFC2-211ENST00000494019 CAMK1GQ96NX5 476 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 VPS35Q96QK1 796 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 RANBP9Q96S59 729 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 NLE1Q9NVX2 485 aaPredicted RBP10.03□□□□□ -0.8
RFC2-211ENST00000494019 SYBUQ9NX95 663 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 BFARQ9NZS9 450 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 VPS18Q9P253 973 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 SPASTQ9UBP0 616 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 APPL1Q9UKG1 709 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 CNOT6Q9ULM6 557 aaKnown RBP10.03□□□□□ -0.8
RFC2-211ENST00000494019 SUFUQ9UMX1 484 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 SLC17A4Q9Y2C5 497 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 TCAF1Q9Y4C2 921 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 OAS3Q9Y6K5 1087 aaKnown RBP10.03□□□□□ -0.8
RFC2-211ENST00000494019 DGKBQ9Y6T7 804 aa10.03□□□□□ -0.8
RFC2-211ENST00000494019 NEMP2A6NFY4 417 aa10.02□□□□□ -0.81
RFC2-211ENST00000494019 MROH6A6NGR9 719 aa10.02□□□□□ -0.81
RFC2-211ENST00000494019 MTX2O75431 263 aa10.02□□□□□ -0.81
RFC2-211ENST00000494019 SRP72O76094 671 aaKnown RBP10.02□□□□□ -0.81
RFC2-211ENST00000494019 IVLP07476 585 aa10.02□□□□□ -0.81
RFC2-211ENST00000494019 CELA2BP08218 269 aaPredicted RBP10.02□□□□□ -0.81
RFC2-211ENST00000494019 ITGALP20701 1170 aa10.02□□□□□ -0.81
RFC2-211ENST00000494019 ADRA1DP25100 572 aa10.02□□□□□ -0.81
RFC2-211ENST00000494019 MGAT1P26572 445 aa10.02□□□□□ -0.81
RFC2-211ENST00000494019 MC4RP32245 332 aa10.02□□□□□ -0.81
RFC2-211ENST00000494019 ID4P47928 161 aa10.02□□□□□ -0.81
RFC2-211ENST00000494019 NOVA1P51513 510 aaKnown RBP10.02□□□□□ -0.81
RFC2-211ENST00000494019 MRPS25P82663 173 aaKnown RBP10.02□□□□□ -0.81
RFC2-211ENST00000494019 NFATC2Q13469 925 aa10.02□□□□□ -0.81
RFC2-211ENST00000494019 PEX6Q13608 980 aa10.02□□□□□ -0.81
RFC2-211ENST00000494019 LAMB3Q13751 1172 aa10.02□□□□□ -0.81
RFC2-211ENST00000494019 PUM1Q14671 1186 aaKnown RBP eCLIP10.02□□□□□ -0.81
RFC2-211ENST00000494019 ELOCQ15369 112 aa10.02□□□□□ -0.81
RFC2-211ENST00000494019 DEFB133Q30KQ1 61 aa10.02□□□□□ -0.81
RFC2-211ENST00000494019 PCID2Q5JVF3 399 aa10.02□□□□□ -0.81
RFC2-211ENST00000494019 ZNF648Q5T619 568 aaPredicted RBP10.02□□□□□ -0.81
RFC2-211ENST00000494019 TSTD2Q5T7W7 516 aa10.02□□□□□ -0.81
RFC2-211ENST00000494019 RNASEH2BQ5TBB1 312 aaKnown RBP10.02□□□□□ -0.81
RFC2-211ENST00000494019 MICALCLQ6ZW33 695 aa10.02□□□□□ -0.81
RFC2-211ENST00000494019 KANSL1Q7Z3B3 1105 aa10.02□□□□□ -0.81
RFC2-211ENST00000494019 ZNF572Q7Z3I7 529 aaPredicted RBP10.02□□□□□ -0.81
RFC2-211ENST00000494019 PCGF5Q86SE9 256 aa10.02□□□□□ -0.81
RFC2-211ENST00000494019 GALNT13Q8IUC8 556 aa10.02□□□□□ -0.81
RFC2-211ENST00000494019 FSTL5Q8N475 847 aaPredicted RBP10.02□□□□□ -0.81
RFC2-211ENST00000494019 EID2Q8N6I1 236 aa10.02□□□□□ -0.81
RFC2-211ENST00000494019 NAT8LQ8N9F0 302 aa10.02□□□□□ -0.81
RFC2-211ENST00000494019 DTX3LQ8TDB6 740 aa10.02□□□□□ -0.81
RFC2-211ENST00000494019 RHBDD1Q8TEB9 315 aa10.02□□□□□ -0.81
RFC2-211ENST00000494019 TBATAQ96M53 351 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms