RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 IKBKGQ9Y6K9 419 aa14.83□□□□□ -0.04
ACTB-213ENST00000493945 A0A087WUV0 522 aaPredicted RBP14.82□□□□□ -0.04
ACTB-213ENST00000493945 A0A1B0GTW7 788 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 CCDC151A5D8V7 595 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 BCAT2O15382 392 aaPredicted RBP14.82□□□□□ -0.04
ACTB-213ENST00000493945 SLC25A14O95258 325 aaPredicted RBP14.82□□□□□ -0.04
ACTB-213ENST00000493945 GOT2P00505 430 aaKnown RBP14.82□□□□□ -0.04
ACTB-213ENST00000493945 HOXC4P09017 264 aaPredicted RBP14.82□□□□□ -0.04
ACTB-213ENST00000493945 MSH3P20585 1137 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 CD38P28907 300 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 KIAA1024LP59773 190 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 MGAT5Q09328 741 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 ITIH4Q14624 930 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 WSCD2Q2TBF2 565 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 KLHL38Q2WGJ6 581 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 HP1BP3Q5SSJ5 553 aaPredicted RBP14.82□□□□□ -0.04
ACTB-213ENST00000493945 UNC5AQ6ZN44 842 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 KIAA0408Q6ZU52 694 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 C3orf62Q6ZUJ4 267 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 CYS1Q717R9 158 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 ARMCX6Q7L4S7 300 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 TAOK1Q7L7X3 1001 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 SYT12Q8IV01 421 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 OXR1Q8N573 874 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 MFSD2AQ8NA29 543 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 TMEM145Q8NBT3 493 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 GLYATL1Q969I3 302 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 CENPTQ96BT3 561 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 KLHDC7BQ96G42 594 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 HIC2Q96JB3 615 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 C9orf72Q96LT7 481 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 PWWP2AQ96N64 755 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 COPS8Q99627 209 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 MYOCQ99972 504 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 EPC1Q9H2F5 836 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 CCDC68Q9H2F9 335 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 CDC42EP4Q9H3Q1 356 aaKnown RBP14.82□□□□□ -0.04
ACTB-213ENST00000493945 MUC3AQ02505 3323 aa14.82□□□□□ -0.04
ACTB-213ENST00000493945 ABCA7Q8IZY2 2146 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 CCDC162PA2VCL2 907 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 CD3EAPO15446 510 aaKnown RBP14.81□□□□□ -0.04
ACTB-213ENST00000493945 HRO43593 1189 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 NDUFS3O75489 264 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 BANF1O75531 89 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 IVLP07476 585 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 ABHD2P08910 425 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 ZNF7P17097 686 aaPredicted RBP14.81□□□□□ -0.04
ACTB-213ENST00000493945 IGFALSP35858 605 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 BLKP51451 505 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 CDK3Q00526 305 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 PTPRRQ15256 657 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 CHRNA6Q15825 494 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 ZNF470Q6ECI4 717 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 LAIR1Q6GTX8 287 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 NEPROQ6NW34 567 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 ABI3BPQ7Z7G0 1075 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 HEATR4Q86WZ0 1026 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 LRRC6Q86X45 466 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 SLC41A1Q8IVJ1 513 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 RBFAQ8N0V3 343 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 NXPE1Q8N323 547 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 FRMD1Q8N878 549 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 DDHD1Q8NEL9 900 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 BTN2A2Q8WVV5 523 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 ATOH1Q92858 354 aaPredicted RBP14.81□□□□□ -0.04
ACTB-213ENST00000493945 SCAMP4Q969E2 229 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 CAVIN3Q969G5 261 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 EID2BQ96D98 161 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 ZNF514Q96K75 400 aaPredicted RBP14.81□□□□□ -0.04
ACTB-213ENST00000493945 CYTH2Q99418 400 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 RMI1Q9H9A7 625 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 PPCSQ9HAB8 311 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 INTS10Q9NVR2 710 aaKnown RBP14.81□□□□□ -0.04
ACTB-213ENST00000493945 KCTD3Q9Y597 815 aa14.81□□□□□ -0.04
ACTB-213ENST00000493945 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.81□□□□□ -0.04
ACTB-213ENST00000493945 ZCWPW2A0A1B0GU75 182 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 KLHL33A6NCF5 533 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 H3BM21 787 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 H3BMM5 538 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 CTIFO43310 598 aaKnown RBP14.8□□□□□ -0.04
ACTB-213ENST00000493945 VEGFDO43915 354 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 ACSL3O95573 720 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 ASMTLO95671 621 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 THEGLP0DJG4 465 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 ACRV1P26436 265 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 FOXN2P32314 431 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 TRIM23P36406 574 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 NSG1P42857 185 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 PEX6Q13608 980 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 FGL2Q14314 439 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 INPP5AQ14642 412 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 NFATC4Q14934 902 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 FASTKD3Q14CZ7 662 aaKnown RBP14.8□□□□□ -0.04
ACTB-213ENST00000493945 DUOXA1Q1HG43 343 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 CES3Q6UWW8 571 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 MACC1Q6ZN28 852 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 CAPN12Q6ZSI9 719 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 SLC26A11Q86WA9 606 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 GSPT2Q8IYD1 628 aaKnown RBP14.8□□□□□ -0.04
ACTB-213ENST00000493945 DEFB119Q8N690 84 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms