RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 HNRNPA1P09651 372 aaKnown RBP eCLIP3.92□□□□□ -1.78
SMC4-223ENST00000493695 PRSS56P0CW18 603 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 POLR2CP19387 275 aaPredicted RBP3.92□□□□□ -1.78
SMC4-223ENST00000493695 PGM1P36871 562 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 MPP1Q00013 466 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 ZNF234Q14588 700 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 PPP2R5BQ15173 497 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 TCTN1Q2MV58 587 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 ZFP69Q49AA0 526 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 ZNF766Q5HY98 468 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 FBXO46Q6PJ61 603 aaPredicted RBP3.92□□□□□ -1.78
SMC4-223ENST00000493695 CPLX2Q6PUV4 134 aaKnown RBP3.92□□□□□ -1.78
SMC4-223ENST00000493695 HEATR4Q86WZ0 1026 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 TDRPQ86YL5 185 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 PCYOX1LQ8NBM8 494 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 OR52I2Q8NH67 350 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 ST8SIA4Q92187 359 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 PIGTQ969N2 578 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 SEC62Q99442 399 aaKnown RBP3.92□□□□□ -1.78
SMC4-223ENST00000493695 PCYT2Q99447 389 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 ASCL2Q99929 193 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 UNC45AQ9H3U1 944 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 PPP1R3EQ9H7J1 279 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 JMJD4Q9H9V9 463 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 BEX4Q9NWD9 120 aaPredicted RBP3.92□□□□□ -1.78
SMC4-223ENST00000493695 HCN3Q9P1Z3 774 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 CNOT7Q9UIV1 285 aaKnown RBP3.92□□□□□ -1.78
SMC4-223ENST00000493695 TEX22C9J3V5 150 aa3.91□□□□□ -1.78
SMC4-223ENST00000493695 SH2B2O14492 632 aaPredicted RBP3.91□□□□□ -1.78
SMC4-223ENST00000493695 ZNF821O75541 412 aaPredicted RBP3.91□□□□□ -1.78
SMC4-223ENST00000493695 IFIT1P09914 478 aaKnown RBP3.91□□□□□ -1.78
SMC4-223ENST00000493695 HOXA13P31271 388 aaPredicted RBP3.91□□□□□ -1.78
SMC4-223ENST00000493695 DCTP40126 519 aa3.91□□□□□ -1.78
SMC4-223ENST00000493695 SORDQ00796 357 aa3.91□□□□□ -1.78
SMC4-223ENST00000493695 PTP4A2Q12974 167 aa3.91□□□□□ -1.78
SMC4-223ENST00000493695 GAGE5Q13069 117 aa3.91□□□□□ -1.78
SMC4-223ENST00000493695 GAGE6Q13070 117 aa3.91□□□□□ -1.78
SMC4-223ENST00000493695 CAMK1Q14012 370 aa3.91□□□□□ -1.78
SMC4-223ENST00000493695 TMEM187Q14656 261 aa3.91□□□□□ -1.78
SMC4-223ENST00000493695 KRT24Q2M2I5 525 aa3.91□□□□□ -1.78
SMC4-223ENST00000493695 DUS1LQ6P1R4 473 aaKnown RBP3.91□□□□□ -1.78
SMC4-223ENST00000493695 INO80CQ6PI98 192 aaPredicted RBP3.91□□□□□ -1.78
SMC4-223ENST00000493695 ADGRG6Q86SQ4 1221 aa3.91□□□□□ -1.78
SMC4-223ENST00000493695 TADA2BQ86TJ2 420 aa3.91□□□□□ -1.78
SMC4-223ENST00000493695 ZBTB2Q8N680 514 aa3.91□□□□□ -1.78
SMC4-223ENST00000493695 TEX19Q8NA77 164 aa3.91□□□□□ -1.78
SMC4-223ENST00000493695 RFFLQ8WZ73 363 aa3.91□□□□□ -1.78
SMC4-223ENST00000493695 NEURL2Q9BR09 285 aa3.91□□□□□ -1.78
SMC4-223ENST00000493695 RPS10P5Q9NQ39 176 aa3.91□□□□□ -1.78
SMC4-223ENST00000493695 PPP1R14DQ9NXH3 145 aa3.91□□□□□ -1.78
SMC4-223ENST00000493695 ACSL5Q9ULC5 683 aa3.91□□□□□ -1.78
SMC4-223ENST00000493695 DLGAP4Q9Y2H0 992 aa3.91□□□□□ -1.78
SMC4-223ENST00000493695 A0A1W2PQM1 296 aa3.9□□□□□ -1.79
SMC4-223ENST00000493695 TAF4O00268 1085 aa3.9□□□□□ -1.79
SMC4-223ENST00000493695 ARHGEF9O43307 516 aa3.9□□□□□ -1.79
SMC4-223ENST00000493695 SYNGR3O43761 229 aa3.9□□□□□ -1.79
SMC4-223ENST00000493695 F9P00740 461 aa3.9□□□□□ -1.79
SMC4-223ENST00000493695 IGHV4-39P01824 125 aa3.9□□□□□ -1.79
SMC4-223ENST00000493695 MAP2K2P36507 400 aa3.9□□□□□ -1.79
SMC4-223ENST00000493695 METAP2P50579 478 aaKnown RBP eCLIP3.9□□□□□ -1.79
SMC4-223ENST00000493695 BSPRYQ5W0U4 402 aa3.9□□□□□ -1.79
SMC4-223ENST00000493695 METTL2BQ6P1Q9 378 aaKnown RBP3.9□□□□□ -1.79
SMC4-223ENST00000493695 RAD9BQ6WBX8 426 aa3.9□□□□□ -1.79
SMC4-223ENST00000493695 NOTCH2NLQ7Z3S9 236 aa3.9□□□□□ -1.79
SMC4-223ENST00000493695 TRPT1Q86TN4 253 aaKnown RBP3.9□□□□□ -1.79
SMC4-223ENST00000493695 SLC35F3Q8IY50 421 aa3.9□□□□□ -1.79
SMC4-223ENST00000493695 SPATA6LQ8N4H0 392 aa3.9□□□□□ -1.79
SMC4-223ENST00000493695 HMGCLL1Q8TB92 370 aa3.9□□□□□ -1.79
SMC4-223ENST00000493695 RUFY2Q8WXA3 655 aa3.9□□□□□ -1.79
SMC4-223ENST00000493695 RNF125Q96EQ8 232 aa3.9□□□□□ -1.79
SMC4-223ENST00000493695 RRP36Q96EU6 259 aaKnown RBP3.9□□□□□ -1.79
SMC4-223ENST00000493695 SCRN2Q96FV2 425 aa3.9□□□□□ -1.79
SMC4-223ENST00000493695 APOPT1Q96IL0 206 aa3.9□□□□□ -1.79
SMC4-223ENST00000493695 METTL2AQ96IZ6 378 aaKnown RBP3.9□□□□□ -1.79
SMC4-223ENST00000493695 MPP4Q96JB8 637 aa3.9□□□□□ -1.79
SMC4-223ENST00000493695 QRFPRQ96P65 431 aa3.9□□□□□ -1.79
SMC4-223ENST00000493695 EYA3Q99504 573 aa3.9□□□□□ -1.79
SMC4-223ENST00000493695 NAP1L4Q99733 375 aaKnown RBP3.9□□□□□ -1.79
SMC4-223ENST00000493695 UBA5Q9GZZ9 404 aa3.9□□□□□ -1.79
SMC4-223ENST00000493695 PAIP1Q9H074 479 aaKnown RBP3.9□□□□□ -1.79
SMC4-223ENST00000493695 INTS2Q9H0H0 1204 aaKnown RBP3.9□□□□□ -1.79
SMC4-223ENST00000493695 PREBQ9HCU5 417 aa3.9□□□□□ -1.79
SMC4-223ENST00000493695 KIAA1456Q9P272 454 aa3.9□□□□□ -1.79
SMC4-223ENST00000493695 JRKLQ9Y4A0 524 aa3.9□□□□□ -1.79
SMC4-223ENST00000493695 LSM4Q9Y4Z0 139 aaKnown RBP3.9□□□□□ -1.79
SMC4-223ENST00000493695 B4E171 279 aa3.89□□□□□ -1.79
SMC4-223ENST00000493695 TMEM63AO94886 807 aa3.89□□□□□ -1.79
SMC4-223ENST00000493695 URODP06132 367 aa3.89□□□□□ -1.79
SMC4-223ENST00000493695 ATP1A3P13637 1013 aa3.89□□□□□ -1.79
SMC4-223ENST00000493695 GNB3P16520 340 aa3.89□□□□□ -1.79
SMC4-223ENST00000493695 AGAP20933 346 aa3.89□□□□□ -1.79
SMC4-223ENST00000493695 ABCD3P28288 659 aa3.89□□□□□ -1.79
SMC4-223ENST00000493695 ELF1P32519 619 aa3.89□□□□□ -1.79
SMC4-223ENST00000493695 TSPAN7P41732 249 aa3.89□□□□□ -1.79
SMC4-223ENST00000493695 GALNT2Q10471 571 aa3.89□□□□□ -1.79
SMC4-223ENST00000493695 G3BP1Q13283 466 aaKnown RBP eCLIP3.89□□□□□ -1.79
SMC4-223ENST00000493695 GPR68Q15743 365 aa3.89□□□□□ -1.79
SMC4-223ENST00000493695 ZNF239Q16600 458 aaKnown RBP3.89□□□□□ -1.79
SMC4-223ENST00000493695 GGNBP1Q5YKI7 109 aa3.89□□□□□ -1.79
SMC4-223ENST00000493695 ACAD10Q6JQN1 1059 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms