RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 ITM2BQ9Y287 266 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 PLXNA2O75051 1894 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 FAM95CA0A1B0GW59 222 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 A0A1W2PQF6 199 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 PSMD11O00231 422 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 NEMP1O14524 444 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 SPINT1O43278 529 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 SPAG7O75391 227 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 NDUFS3O75489 264 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 GSTA1P08263 222 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 DRD3P35462 400 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 CLCN5P51795 746 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 RPS14P62263 151 aaKnown RBP14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 CCDC15Q0P6D6 951 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 NFATC2Q13469 925 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 EOGTQ5NDL2 527 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 LIPIQ6XZB0 460 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 CERS6Q6ZMG9 384 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 SH2D5Q6ZV89 423 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 HSD11B1LQ7Z5J1 315 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 GPATCH11Q8N954 259 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 BANPQ8N9N5 519 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 ISL2Q96A47 359 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 ELAC2Q9BQ52 826 aaKnown RBP14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 MKRN2Q9H000 416 aaKnown RBP14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 CDH19Q9H159 772 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 FAM96AQ9H5X1 160 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 ASB8Q9H765 288 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 SNX15Q9NRS6 342 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 CORO1CQ9ULV4 474 aaPredicted RBP14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 RGSL1A5PLK6 1076 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 FAM47DPA6NHR8 397 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 GOLGA8CPA6NN73 597 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 TNFRSF10AO00220 468 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 PRPF4O43172 522 aaKnown RBP eCLIP14□□□□□ -0.17
PDZRN3-210ENST00000492909 TYROBPO43914 113 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 PPARGP37231 505 aaPredicted RBP14□□□□□ -0.17
PDZRN3-210ENST00000492909 CCNFP41002 786 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 DCDC1P59894 354 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 USP10Q14694 798 aaKnown RBP14□□□□□ -0.17
PDZRN3-210ENST00000492909 CHRNA6Q15825 494 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 GPR33Q49SQ1 333 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 PIP5KL1Q5T9C9 394 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 Q6ZVL8 140 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 TMPRSS6Q8IU80 811 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 RAVER1Q8IY67 606 aaKnown RBP14□□□□□ -0.17
PDZRN3-210ENST00000492909 UBALD2Q8IYN6 164 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 AADATQ8N5Z0 425 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 ACVR1CQ8NER5 493 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 ZNF398Q8TD17 642 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 DYDC1Q8WWB3 177 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 CKAP2Q8WWK9 683 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 APOPT1Q96IL0 206 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 ELMO2Q96JJ3 720 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 TTC1Q99614 292 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 WRAP53Q9BUR4 548 aaKnown RBP14□□□□□ -0.17
PDZRN3-210ENST00000492909 EPHX3Q9H6B9 360 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 PCMTD2Q9NV79 361 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 WNT16Q9UBV4 365 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 FBXL21Q9UKT6 434 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 CRYL1Q9Y2S2 319 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 PLXNB3Q9ULL4 1909 aa14□□□□□ -0.17
PDZRN3-210ENST00000492909 COPEO14579 308 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 GPR39O43194 453 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 DNTTP04053 509 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 COL9A1P20849 921 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 SAT1P21673 171 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 ETV3P41162 512 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 MAGEA12P43365 314 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 SLC18A1P54219 525 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 SLC12A2P55011 1212 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 POU4F1Q01851 419 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 ITGA9Q13797 1035 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 ACOX1Q15067 660 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 TMEM52BQ4KMG9 183 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 RFLNAQ6ZTI6 216 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 CMC1Q7Z7K0 106 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 HDDC3Q8N4P3 179 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 EDAQ92838 391 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 OMDQ99983 421 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 FAM83DQ9H4H8 585 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 CAB39LQ9H9S4 337 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 CD248Q9HCU0 757 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 KLC4Q9NSK0 619 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 NKIRAS1Q9NYS0 192 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 NFKBIL1Q9UBC1 381 aaPredicted RBP13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 CD84Q9UIB8 345 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 CRLS1Q9UJA2 301 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 MMP17Q9ULZ9 603 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 SCML1Q9UN30 329 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 MRPS17Q9Y2R5 130 aaKnown RBP13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 FADS3Q9Y5Q0 445 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 TRBV5-4A0A0C4DH59 114 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 A0A1W2PP55 124 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 UBA6A0AVT1 1052 aaPredicted RBP13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 KRBA1A5PL33 1030 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 WNT9AO14904 365 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 SNX3O60493 162 aa13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 RNASEH2AO75792 299 aaKnown RBP13.99□□□□□ -0.17
PDZRN3-210ENST00000492909 PDGFBP01127 241 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms