RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 PCDH20Q8N6Y1 951 aaKnown RBP3.95□□□□□ -1.78
CLK1-213ENST00000492793 MCUQ8NE86 351 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 PAFAH2Q99487 392 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 SEMA3CQ99985 751 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 ZPBPQ9BS86 351 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 TMEM204Q9BSN7 226 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 TEX12Q9BXU0 123 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 SIL1Q9H173 461 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 PDE7BQ9NP56 450 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 MMP25Q9NPA2 562 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 ANKEF1Q9NU02 776 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 CPSF2Q9P2I0 782 aaKnown RBP3.95□□□□□ -1.78
CLK1-213ENST00000492793 MALT1Q9UDY8 824 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 DBNLQ9UJU6 430 aaKnown RBP3.95□□□□□ -1.78
CLK1-213ENST00000492793 NFS1Q9Y697 457 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 IGLV5-52A0A0A0MRZ9 124 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 A0A0U1RQJ8 604 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 CPED1A4D0V7 1026 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 TMCC2O75069 709 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 DAB1O75553 588 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 CLDN14O95500 239 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 TUBBP07437 444 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 IGHV4-30-4P0DP06 118 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 SRCP12931 536 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 GNL1P36915 607 aaPredicted RBP3.94□□□□□ -1.78
CLK1-213ENST00000492793 CLCNKAP51800 687 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 GPR143P51810 404 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 LINC00205P59089 165 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 TAS2R38P59533 333 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 SEC61BP60468 96 aaKnown RBP3.94□□□□□ -1.78
CLK1-213ENST00000492793 TMF1P82094 1093 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 MRPS5P82675 430 aaKnown RBP3.94□□□□□ -1.78
CLK1-213ENST00000492793 PDE1BQ01064 536 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 SREBF2Q12772 1141 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 TRAF3Q13114 568 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 PRPF4BQ13523 1007 aaKnown RBP3.94□□□□□ -1.78
CLK1-213ENST00000492793 SLC39A14Q15043 492 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 NTRK2Q16620 822 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 PMS2CLQ68D20 193 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 GPR139Q6DWJ6 353 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 ZNF280DQ6N043 979 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 PDXDC1Q6P996 788 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 C16orf54Q6UWD8 224 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 CCNI2Q6ZMN8 369 aaPredicted RBP3.94□□□□□ -1.78
CLK1-213ENST00000492793 C9orf47Q6ZRZ4 202 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 FOXRED2Q8IWF2 684 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 BEST3Q8N1M1 668 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 OR2AK2Q8NG84 335 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 ELP5Q8TE02 316 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 CCDC34Q96HJ3 373 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 THOC3Q96J01 351 aaKnown RBP3.94□□□□□ -1.78
CLK1-213ENST00000492793 EGLN2Q96KS0 407 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 CAMK1GQ96NX5 476 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 FIZ1Q96SL8 496 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 PAG1Q9NWQ8 432 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 MTMR10Q9NXD2 777 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 WNT16Q9UBV4 365 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 FBXL2Q9UKC9 423 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 KCNS2Q9ULS6 477 aa3.94□□□□□ -1.78
CLK1-213ENST00000492793 CDRT15L2A8MXV6 281 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 ZBTB43O43298 467 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 MITFO75030 526 aaPredicted RBP3.93□□□□□ -1.78
CLK1-213ENST00000492793 GAGE7O76087 117 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 KDM4BO94953 1096 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 PAPSS2O95340 614 aaPredicted RBP3.93□□□□□ -1.78
CLK1-213ENST00000492793 NGFRP08138 427 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 GAGE12FP0CL80 117 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 GAGE12GP0CL81 117 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 GAGE12IP0CL82 117 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 T-ENOLP0DO92 83 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 MMP9P14780 707 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 HOXA13P31271 388 aaPredicted RBP3.93□□□□□ -1.78
CLK1-213ENST00000492793 TMPOP42166 694 aaKnown RBP3.93□□□□□ -1.78
CLK1-213ENST00000492793 AMPHP49418 695 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 STAT2P52630 851 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 IFI35P80217 286 aaPredicted RBP3.93□□□□□ -1.78
CLK1-213ENST00000492793 ECT2LQ008S8 904 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 BNC1Q01954 994 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 EGR4Q05215 589 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 GAGE1Q13065 139 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 GAGE4Q13068 117 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 DLG2Q15700 870 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 CCDC96Q2M329 555 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 FAM69BQ5VUD6 431 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 NSUN5P2Q63ZY6 315 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 FRG2Q64ET8 278 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 CREB3L2Q70SY1 520 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 KBTBD6Q86V97 674 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 EPHX4Q8IUS5 362 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 LINC00346Q8IVM7 164 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 OR8H2Q8N162 312 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 CLIP4Q8N3C7 705 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 B4GALNT2Q8NHY0 566 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 UTP15Q8TED0 518 aaKnown RBP3.93□□□□□ -1.78
CLK1-213ENST00000492793 WFIKKN2Q8TEU8 576 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 DNAAF4Q8WXU2 420 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 TANKQ92844 425 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 SCMH1Q96GD3 660 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 ZNF479Q96JC4 524 aa3.93□□□□□ -1.78
CLK1-213ENST00000492793 ADGRG7Q96K78 797 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms