RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 MBD6Q96DN6 1003 aa5.31□□□□□ -1.56
SEC13-219ENST00000492602 MS4A3Q96HJ5 214 aa5.31□□□□□ -1.56
SEC13-219ENST00000492602 NT5C1BQ96P26 610 aa5.31□□□□□ -1.56
SEC13-219ENST00000492602 TAAR6Q96RI8 345 aa5.31□□□□□ -1.56
SEC13-219ENST00000492602 TRIM56Q9BRZ2 755 aaKnown RBP5.31□□□□□ -1.56
SEC13-219ENST00000492602 NDC1Q9BTX1 674 aa5.31□□□□□ -1.56
SEC13-219ENST00000492602 BACH2Q9BYV9 841 aa5.31□□□□□ -1.56
SEC13-219ENST00000492602 EPS8L2Q9H6S3 715 aa5.31□□□□□ -1.56
SEC13-219ENST00000492602 MMRN2Q9H8L6 949 aa5.31□□□□□ -1.56
SEC13-219ENST00000492602 FAM204AQ9H8W3 233 aa5.31□□□□□ -1.56
SEC13-219ENST00000492602 PCDH12Q9NPG4 1184 aa5.31□□□□□ -1.56
SEC13-219ENST00000492602 PHPT1Q9NRX4 125 aaPredicted RBP5.31□□□□□ -1.56
SEC13-219ENST00000492602 EXOC1Q9NV70 894 aa5.31□□□□□ -1.56
SEC13-219ENST00000492602 STMN3Q9NZ72 180 aa5.31□□□□□ -1.56
SEC13-219ENST00000492602 CNOT8Q9UFF9 292 aaKnown RBP5.31□□□□□ -1.56
SEC13-219ENST00000492602 KCNN3Q9UGI6 736 aa5.31□□□□□ -1.56
SEC13-219ENST00000492602 MTMR6Q9Y217 621 aa5.31□□□□□ -1.56
SEC13-219ENST00000492602 MEMO1Q9Y316 297 aa5.31□□□□□ -1.56
SEC13-219ENST00000492602 SLC30A1Q9Y6M5 507 aa5.31□□□□□ -1.56
SEC13-219ENST00000492602 MORC2Q9Y6X9 1032 aaPredicted RBP5.31□□□□□ -1.56
SEC13-219ENST00000492602 NCOA6Q14686 2063 aaPredicted RBP5.31□□□□□ -1.56
SEC13-219ENST00000492602 ANKRD36A6QL64 1941 aa5.31□□□□□ -1.56
SEC13-219ENST00000492602 TLN2Q9Y4G6 2542 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 TRIM49BA6NDI0 452 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 MEN1O00255 615 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 O00370 1275 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 POLR2DO15514 142 aaKnown RBP5.3□□□□□ -1.56
SEC13-219ENST00000492602 LDB2O43679 373 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 GADD45BO75293 160 aaPredicted RBP5.3□□□□□ -1.56
SEC13-219ENST00000492602 PAGE1O75459 146 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 CRLF1O75462 422 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 IGHEP01854 428 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 PYGMP11217 842 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 VDRP11473 427 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 NELFEP18615 380 aaKnown RBP5.3□□□□□ -1.56
SEC13-219ENST00000492602 GCLMP48507 274 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 SUOXP51687 545 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 GSDMDP57764 484 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 ACY1Q03154 408 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 EIF4EBP2Q13542 120 aaPredicted RBP5.3□□□□□ -1.56
SEC13-219ENST00000492602 DEFB113Q30KQ7 82 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 C5orf22Q49AR2 442 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 PLEKHS1Q5SXH7 462 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 C1orf220Q5T0J3 134 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 AGAP7PQ5VUJ5 663 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 CNNM4Q6P4Q7 775 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 DOK6Q6PKX4 331 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 IGFL2Q6UWQ7 119 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 LEKR1Q6ZMV7 388 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 PRSS42Q7Z5A4 293 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 BPHLQ86WA6 291 aaPredicted RBP5.3□□□□□ -1.56
SEC13-219ENST00000492602 C12orf56Q8IXR9 622 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 DMRTC2Q8IXT2 367 aaPredicted RBP5.3□□□□□ -1.56
SEC13-219ENST00000492602 ULK2Q8IYT8 1036 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 CIARTQ8N365 385 aaPredicted RBP5.3□□□□□ -1.56
SEC13-219ENST00000492602 SLC38A9Q8NBW4 561 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 LINC00301Q8NCQ3 95 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 SIMC1Q8NDZ2 872 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 ARMC2Q8NEN0 867 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 KLHL6Q8WZ60 621 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 ARHGEF2Q92974 986 aaKnown RBP5.3□□□□□ -1.56
SEC13-219ENST00000492602 EEF2KMTQ96G04 330 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 COX4I2Q96KJ9 171 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 HSFY1Q96LI6 401 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 AGAP4Q96P64 663 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 IP6K3Q96PC2 410 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 OR2M4Q96R27 311 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 C7orf25Q9BPX7 421 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 FRMD8Q9BZ67 464 aaPredicted RBP5.3□□□□□ -1.56
SEC13-219ENST00000492602 TKTL2Q9H0I9 626 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 POPDC2Q9HBU9 364 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 SLC39A2Q9NP94 309 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 ATP13A2Q9NQ11 1180 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 ANLNQ9NQW6 1124 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 NPDC1Q9NQX5 325 aaPredicted RBP5.3□□□□□ -1.56
SEC13-219ENST00000492602 ST7Q9NRC1 585 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 DDIT4Q9NX09 232 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 COQ3Q9NZJ6 369 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 OGFRQ9NZT2 677 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 MPP6Q9NZW5 540 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 LRFN1Q9P244 771 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 FHOD1Q9Y613 1164 aa5.3□□□□□ -1.56
SEC13-219ENST00000492602 ANK3Q12955 4377 aaKnown RBP5.3□□□□□ -1.56
SEC13-219ENST00000492602 ILVBLA1L0T0 632 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 GOLGA6CA6NDK9 693 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 GOLGA6BA6NDN3 693 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 LILRA5A6NI73 299 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 H7C1Q1 480 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 M0QYV0 167 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 SART1O43290 800 aaKnown RBP5.29□□□□□ -1.56
SEC13-219ENST00000492602 SPRY1O43609 319 aaPredicted RBP5.29□□□□□ -1.56
SEC13-219ENST00000492602 SNX2O60749 519 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 CTAG2O75638 210 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 UBXN7O94888 489 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 RHOBTB3O94955 611 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 PIGNO95427 931 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 IFNA2P01563 188 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 CAPN1P07384 714 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 IVLP07476 585 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 ELFN1P0C7U0 828 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms