RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 BMPERQ8N8U9 685 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 DTX3LQ8TDB6 740 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 LRRN4Q8WUT4 740 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 USP7Q93009 1102 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 MED8Q96G25 268 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 MLPHQ9BV36 600 aaPredicted RBP8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 ADGRE3Q9BY15 652 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 SEMA4CQ9C0C4 833 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 FAM83DQ9H4H8 585 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 RDH14Q9HBH5 336 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 MAGEE1Q9HCI5 957 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 SARS2Q9NP81 518 aaKnown RBP8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 ABHD10Q9NUJ1 306 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 FOXJ2Q9P0K8 574 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 PISDQ9UG56 409 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 MOSPD1Q9UJG1 213 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 OAS3Q9Y6K5 1087 aaKnown RBP8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 ASH1LQ9NR48 2969 aaKnown RBP8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 CBFA2T2O43439 604 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 NUAK1O60285 661 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 EPOP01588 193 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 ATP1A1P05023 1023 aaKnown RBP8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 TPM3P06753 285 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 JMJD7P0C870 316 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 CCL4P13236 92 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 PLA2G2AP14555 144 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 ZFXP17010 805 aaPredicted RBP8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 ALDH4A1P30038 563 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 ACTR1BP42025 376 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 CD86P42081 329 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 SSR1P43307 286 aaKnown RBP8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 NR2C2P49116 596 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 EPHB1P54762 984 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 ACTR1AP61163 376 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 MESDQ14696 234 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 PDK1Q15118 436 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 PRKD1Q15139 912 aaPredicted RBP8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 SKOR2Q2VWA4 1001 aaPredicted RBP8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 LINC00303Q3SY05 128 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 TEX44Q53QW1 395 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 PDPK2PQ6A1A2 396 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 TMEM71Q6P5X7 295 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 FOXR1Q6PIV2 292 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 LYSMD3Q7Z3D4 306 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 TRIM74Q86UV6 250 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 GALNT13Q8IUC8 556 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 LPCAT1Q8NF37 534 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 SLC37A2Q8TED4 501 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 TAAR9Q96RI9 348 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 DDA1Q9BW61 102 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 SLC25A51Q9H1U9 297 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 CARD9Q9H257 536 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 SYNDIG1Q9H7V2 258 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 NHEJ1Q9H9Q4 299 aaPredicted RBP8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 UCK1Q9HA47 277 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 TBC1D29Q9UFV1 150 aa8.3□□□□□ -1.08
SMARCB1-207ENST00000491967 MYO18BQ8IUG5 2567 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 TENM4Q6N022 2769 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 KIR2DS5A0A0G2JLQ3 304 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 A0A0G2JNG1 304 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 C1orf232A0A0U1RR37 186 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 LOC285095A0A1B0GVY8 99 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 LRRD1A4D1F6 860 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 OR5K4A6NMS3 321 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 B4E171 279 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 KIR2DS3K7RE56 304 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 APOL1O14791 398 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 INPP4BO15327 924 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 AKR1B10O60218 316 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 MFAP3LO75121 409 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 ZIC2O95409 532 aaPredicted RBP8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 LCA5LO95447 670 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 XRCC1P18887 633 aaPredicted RBP8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 WT1P19544 449 aaPredicted RBP8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 CD68P34810 354 aaPredicted RBP8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 TSPAN7P41732 249 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 CDKN2BP42772 138 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 EPHA4P54764 986 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 CDK18Q07002 472 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 SRSF6Q13247 344 aaKnown RBP8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 KIR2DS5Q14953 304 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 AMZ1Q400G9 498 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 MAP9Q49MG5 647 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 PHF19Q5T6S3 580 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 NKAIN2Q5VXU1 208 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 KIAA1614Q5VZ46 1190 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 DOK6Q6PKX4 331 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 ZNF605Q86T29 641 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 NT5DC3Q86UY8 548 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 ZFAND4Q86XD8 727 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 EXD3Q8N9H8 876 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 CCNYQ8ND76 341 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 AGBL5Q8NDL9 886 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 GPR26Q8NDV2 337 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 CCHCR1Q8TD31 782 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 SGF29Q96ES7 293 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 CCDC74BQ96LY2 380 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 TEKT5Q96M29 485 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 SRPK1Q96SB4 655 aaKnown RBP8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 HERPUD2Q9BSE4 406 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms