RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 PTCD3Q96EY7 689 aaKnown RBP9.41□□□□□ -0.9
BRCA1-219ENST00000491747 DTLQ9NZJ0 730 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 SCOCQ9UIL1 159 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 ZFR2Q9UPR6 939 aaKnown RBP9.41□□□□□ -0.9
BRCA1-219ENST00000491747 EFR3BQ9Y2G0 817 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 IKBKGQ9Y6K9 419 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 A0A1W2PPC4 97 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 ZNF487B1APH4 448 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 E7ESA3 106 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 BCAT2O15382 392 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-219ENST00000491747 LATO43561 262 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 RNGTTO60942 597 aaKnown RBP9.41□□□□□ -0.9
BRCA1-219ENST00000491747 MT-ND3P03897 115 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 GSTA2P09210 222 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 ESRRAP11474 423 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-219ENST00000491747 ENGP17813 658 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 CD27P26842 260 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 HOXD12P35452 270 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 GARSP41250 739 aaKnown RBP9.41□□□□□ -0.9
BRCA1-219ENST00000491747 CCR5P51681 352 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 NEK3P51956 506 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 KRT72Q14CN4 511 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 RBBP5Q15291 538 aaKnown RBP9.41□□□□□ -0.9
BRCA1-219ENST00000491747 TAZQ16635 292 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 AP1ARQ63HQ0 302 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 ZSWIM9Q86XI8 627 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 ATPAF2Q8N5M1 289 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 NAT8LQ8N9F0 302 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 FBXO36Q8NEA4 188 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 MZB1Q8WU39 189 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 CPT1BQ92523 772 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 KLK6Q92876 244 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 SKA1Q96BD8 255 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 FAM136AQ96C01 138 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 LRIG1Q96JA1 1093 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 ZNF599Q96NL3 588 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 CYTH2Q99418 400 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 CINPQ9BW66 212 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-219ENST00000491747 CPEB1Q9BZB8 566 aaKnown RBP9.41□□□□□ -0.9
BRCA1-219ENST00000491747 TM9SF3Q9HD45 589 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 DYRK4Q9NR20 520 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 PAPOLBQ9NRJ5 636 aaKnown RBP9.41□□□□□ -0.9
BRCA1-219ENST00000491747 SLC6A14Q9UN76 642 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 ITM2BQ9Y287 266 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 FADS3Q9Y5Q0 445 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 A0A1B0GTW7 788 aa9.4□□□□□ -0.9
BRCA1-219ENST00000491747 GOLGA8RI6L899 631 aa9.4□□□□□ -0.9
BRCA1-219ENST00000491747 BANF1O75531 89 aa9.4□□□□□ -0.9
BRCA1-219ENST00000491747 WNT1P04628 370 aa9.4□□□□□ -0.9
BRCA1-219ENST00000491747 TIMP2P16035 220 aa9.4□□□□□ -0.9
BRCA1-219ENST00000491747 SERPINB3P29508 390 aa9.4□□□□□ -0.9
BRCA1-219ENST00000491747 DPP6P42658 865 aa9.4□□□□□ -0.9
BRCA1-219ENST00000491747 CSNK1DP48730 415 aa9.4□□□□□ -0.9
BRCA1-219ENST00000491747 CSNK1EP49674 416 aaKnown RBP9.4□□□□□ -0.9
BRCA1-219ENST00000491747 MAXP61244 160 aa9.4□□□□□ -0.9
BRCA1-219ENST00000491747 IHHQ14623 411 aa9.4□□□□□ -0.9
BRCA1-219ENST00000491747 RFTN1Q14699 578 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-219ENST00000491747 EFTUD2Q15029 972 aaKnown RBP eCLIP9.4□□□□□ -0.9
BRCA1-219ENST00000491747 ACSBG2Q5FVE4 666 aa9.4□□□□□ -0.9
BRCA1-219ENST00000491747 TMCO4Q5TGY1 634 aa9.4□□□□□ -0.9
BRCA1-219ENST00000491747 LRRC74BQ6ZQY2 392 aa9.4□□□□□ -0.9
BRCA1-219ENST00000491747 CAMK1DQ8IU85 385 aa9.4□□□□□ -0.9
BRCA1-219ENST00000491747 CEP76Q8TAP6 659 aa9.4□□□□□ -0.9
BRCA1-219ENST00000491747 DCAKDQ8WVC6 231 aa9.4□□□□□ -0.9
BRCA1-219ENST00000491747 SCG3Q8WXD2 468 aaKnown RBP9.4□□□□□ -0.9
BRCA1-219ENST00000491747 PPP1R16AQ96I34 528 aa9.4□□□□□ -0.9
BRCA1-219ENST00000491747 SLC6A18Q96N87 628 aa9.4□□□□□ -0.9
BRCA1-219ENST00000491747 PSKH2Q96QS6 385 aa9.4□□□□□ -0.9
BRCA1-219ENST00000491747 EDEM2Q9BV94 578 aa9.4□□□□□ -0.9
BRCA1-219ENST00000491747 TRPM6Q9BX84 2022 aa9.4□□□□□ -0.9
BRCA1-219ENST00000491747 TMEM120AQ9BXJ8 343 aa9.4□□□□□ -0.9
BRCA1-219ENST00000491747 NUSAP1Q9BXS6 441 aaKnown RBP9.4□□□□□ -0.9
BRCA1-219ENST00000491747 ARL8BQ9NVJ2 186 aa9.4□□□□□ -0.9
BRCA1-219ENST00000491747 SLC17A7Q9P2U7 560 aa9.4□□□□□ -0.9
BRCA1-219ENST00000491747 STX18Q9P2W9 335 aaKnown RBP9.4□□□□□ -0.9
BRCA1-219ENST00000491747 SAE1Q9UBE0 346 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-219ENST00000491747 A0A1W2PQU0 124 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 PSMG1O95456 288 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 CR2P20023 1033 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 SCNN1BP51168 640 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 DYNLT1P63172 113 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 NSUN2Q08J23 767 aaKnown RBP eCLIP9.39□□□□□ -0.91
BRCA1-219ENST00000491747 RCN2Q14257 317 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 FGL2Q14314 439 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 KPNB1Q14974 876 aaKnown RBP9.39□□□□□ -0.91
BRCA1-219ENST00000491747 FNBP1LQ5T0N5 605 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 STPG1Q5TH74 334 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 SEL1L3Q68CR1 1132 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 FBXL19Q6PCT2 694 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 TRIM69Q86WT6 500 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 LRRC6Q86X45 466 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 RFX6Q8HWS3 928 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 TEX26Q8N6G2 289 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 ACTL9Q8TC94 416 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 APOPT1Q96IL0 206 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 TSGA13Q96PP4 275 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 LGMNQ99538 433 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 SUV39H2Q9H5I1 410 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 PREBQ9HCU5 417 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 SEPT3Q9UH03 358 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms