RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 LRP8Q14114 963 aa13.1□□□□□ -0.31
USF1-206ENST00000491629 ZNF235Q14590 738 aa13.1□□□□□ -0.31
USF1-206ENST00000491629 PLEKHA7Q6IQ23 1121 aa13.1□□□□□ -0.31
USF1-206ENST00000491629 ACAD10Q6JQN1 1059 aa13.1□□□□□ -0.31
USF1-206ENST00000491629 ASB18Q6ZVZ8 466 aa13.1□□□□□ -0.31
USF1-206ENST00000491629 ATCAYQ86WG3 371 aa13.1□□□□□ -0.31
USF1-206ENST00000491629 GALNT13Q8IUC8 556 aa13.1□□□□□ -0.31
USF1-206ENST00000491629 CCDC13Q8IYE1 715 aa13.1□□□□□ -0.31
USF1-206ENST00000491629 ESX1Q8N693 406 aa13.1□□□□□ -0.31
USF1-206ENST00000491629 TEX19Q8NA77 164 aa13.1□□□□□ -0.31
USF1-206ENST00000491629 GALNT6Q8NCL4 622 aa13.1□□□□□ -0.31
USF1-206ENST00000491629 RIOK2Q9BVS4 552 aaKnown RBP13.1□□□□□ -0.31
USF1-206ENST00000491629 TRIM55Q9BYV6 548 aa13.1□□□□□ -0.31
USF1-206ENST00000491629 ZMYND15Q9H091 742 aa13.1□□□□□ -0.31
USF1-206ENST00000491629 PRDM8Q9NQV8 689 aa13.1□□□□□ -0.31
USF1-206ENST00000491629 SEPT11Q9NVA2 429 aaKnown RBP13.1□□□□□ -0.31
USF1-206ENST00000491629 KCNK6Q9Y257 313 aa13.1□□□□□ -0.31
USF1-206ENST00000491629 A0A1W2PQ67 120 aa13.09□□□□□ -0.31
USF1-206ENST00000491629 ANKRD62A6NC57 917 aa13.09□□□□□ -0.31
USF1-206ENST00000491629 TMEM191CA6NGB0 347 aa13.09□□□□□ -0.31
USF1-206ENST00000491629 EIF3CLB5ME19 914 aaKnown RBP13.09□□□□□ -0.31
USF1-206ENST00000491629 MKRN2OSH3BPM6 223 aa13.09□□□□□ -0.31
USF1-206ENST00000491629 C9P02748 559 aa13.09□□□□□ -0.31
USF1-206ENST00000491629 ANKRD34CP0C6C1 535 aa13.09□□□□□ -0.31
USF1-206ENST00000491629 AMPD1P23109 780 aa13.09□□□□□ -0.31
USF1-206ENST00000491629 PSMA2P25787 234 aa13.09□□□□□ -0.31
USF1-206ENST00000491629 IL1R2P27930 398 aa13.09□□□□□ -0.31
USF1-206ENST00000491629 MAPK9P45984 424 aa13.09□□□□□ -0.31
USF1-206ENST00000491629 STC1P52823 247 aa13.09□□□□□ -0.31
USF1-206ENST00000491629 EPHA4P54764 986 aa13.09□□□□□ -0.31
USF1-206ENST00000491629 SEPT6Q14141 434 aa13.09□□□□□ -0.31
USF1-206ENST00000491629 SYCP1Q15431 976 aa13.09□□□□□ -0.31
USF1-206ENST00000491629 ZNF765Q7L2R6 523 aa13.09□□□□□ -0.31
USF1-206ENST00000491629 CHST15Q7LFX5 561 aaPredicted RBP13.09□□□□□ -0.31
USF1-206ENST00000491629 NLRP8Q86W28 1048 aa13.09□□□□□ -0.31
USF1-206ENST00000491629 PCSK5Q92824 1860 aa13.09□□□□□ -0.31
USF1-206ENST00000491629 EIF3CQ99613 913 aaKnown RBP13.09□□□□□ -0.31
USF1-206ENST00000491629 ULBP3Q9BZM4 244 aa13.09□□□□□ -0.31
USF1-206ENST00000491629 AKIRIN1Q9H9L7 192 aaPredicted RBP13.09□□□□□ -0.31
USF1-206ENST00000491629 SCHIP1Q9P0W5 487 aaPredicted RBP13.09□□□□□ -0.31
USF1-206ENST00000491629 ZNHIT2Q9UHR6 403 aa13.09□□□□□ -0.31
USF1-206ENST00000491629 SLC30A1Q9Y6M5 507 aa13.09□□□□□ -0.31
USF1-206ENST00000491629 A0A0J9YYE9 177 aa13.08□□□□□ -0.32
USF1-206ENST00000491629 FADS2P1A8MWK0 482 aa13.08□□□□□ -0.32
USF1-206ENST00000491629 LRCH4O75427 683 aa13.08□□□□□ -0.32
USF1-206ENST00000491629 AGFG2O95081 481 aa13.08□□□□□ -0.32
USF1-206ENST00000491629 PRLP01236 227 aa13.08□□□□□ -0.32
USF1-206ENST00000491629 TRBC1P01850 177 aa13.08□□□□□ -0.32
USF1-206ENST00000491629 F3P13726 295 aa13.08□□□□□ -0.32
USF1-206ENST00000491629 HSPA9P38646 679 aaKnown RBP13.08□□□□□ -0.32
USF1-206ENST00000491629 PPM1FP49593 454 aaPredicted RBP13.08□□□□□ -0.32
USF1-206ENST00000491629 PMS2P54278 862 aa13.08□□□□□ -0.32
USF1-206ENST00000491629 UBE2IP63279 158 aaKnown RBP13.08□□□□□ -0.32
USF1-206ENST00000491629 ARMC12Q5T9G4 340 aa13.08□□□□□ -0.32
USF1-206ENST00000491629 C6orf15Q6UXA7 325 aaPredicted RBP13.08□□□□□ -0.32
USF1-206ENST00000491629 IRF2BP2Q7Z5L9 587 aa13.08□□□□□ -0.32
USF1-206ENST00000491629 GALNT11Q8NCW6 608 aa13.08□□□□□ -0.32
USF1-206ENST00000491629 PKNOX2Q96KN3 472 aa13.08□□□□□ -0.32
USF1-206ENST00000491629 C9orf72Q96LT7 481 aa13.08□□□□□ -0.32
USF1-206ENST00000491629 RUFY1Q96T51 708 aa13.08□□□□□ -0.32
USF1-206ENST00000491629 CPNE7Q9UBL6 633 aa13.08□□□□□ -0.32
USF1-206ENST00000491629 POLHQ9Y253 713 aa13.08□□□□□ -0.32
USF1-206ENST00000491629 FER1L5A0AVI2 2057 aa13.08□□□□□ -0.32
USF1-206ENST00000491629 PIKFYVEQ9Y2I7 2098 aa13.08□□□□□ -0.32
USF1-206ENST00000491629 CDC14CA4D256 554 aa13.07□□□□□ -0.32
USF1-206ENST00000491629 GOLGA6L3A6NEY3 463 aa13.07□□□□□ -0.32
USF1-206ENST00000491629 KIF1CO43896 1103 aaKnown RBP13.07□□□□□ -0.32
USF1-206ENST00000491629 SNX2O60749 519 aa13.07□□□□□ -0.32
USF1-206ENST00000491629 RFPL1O75677 317 aa13.07□□□□□ -0.32
USF1-206ENST00000491629 KIAA0754O94854 1291 aa13.07□□□□□ -0.32
USF1-206ENST00000491629 TIAF1O95411 115 aa13.07□□□□□ -0.32
USF1-206ENST00000491629 CLDN7O95471 211 aa13.07□□□□□ -0.32
USF1-206ENST00000491629 ASMTLO95671 621 aa13.07□□□□□ -0.32
USF1-206ENST00000491629 ACP5P13686 325 aa13.07□□□□□ -0.32
USF1-206ENST00000491629 COL8A1P27658 744 aa13.07□□□□□ -0.32
USF1-206ENST00000491629 MAN1A1P33908 653 aa13.07□□□□□ -0.32
USF1-206ENST00000491629 LEPRP48357 1165 aaKnown RBP13.07□□□□□ -0.32
USF1-206ENST00000491629 FOXM1Q08050 763 aa13.07□□□□□ -0.32
USF1-206ENST00000491629 TXNRD3NBQ6F5E7 133 aa13.07□□□□□ -0.32
USF1-206ENST00000491629 USP45Q70EL2 814 aa13.07□□□□□ -0.32
USF1-206ENST00000491629 POLNQ7Z5Q5 900 aa13.07□□□□□ -0.32
USF1-206ENST00000491629 LZTR1Q8N653 840 aa13.07□□□□□ -0.32
USF1-206ENST00000491629 TEX26Q8N6G2 289 aa13.07□□□□□ -0.32
USF1-206ENST00000491629 EXD1Q8NHP7 514 aa13.07□□□□□ -0.32
USF1-206ENST00000491629 CPT1CQ8TCG5 803 aa13.07□□□□□ -0.32
USF1-206ENST00000491629 PLEKHG4BQ96PX9 1271 aa13.07□□□□□ -0.32
USF1-206ENST00000491629 DTLQ9NZJ0 730 aa13.07□□□□□ -0.32
USF1-206ENST00000491629 VPS18Q9P253 973 aa13.07□□□□□ -0.32
USF1-206ENST00000491629 PCDHGA6Q9Y5G7 932 aa13.07□□□□□ -0.32
USF1-206ENST00000491629 ADGRG1Q9Y653 693 aa13.07□□□□□ -0.32
USF1-206ENST00000491629 DIDO1Q9BTC0 2240 aaKnown RBP13.07□□□□□ -0.32
USF1-206ENST00000491629 APCP25054 2843 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 LILRA5A6NI73 299 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 TMCO5BA8MYB1 307 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 PRPSAP2O60256 369 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 KATNA1O75449 491 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 CREG1O75629 220 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 ZNF30P17039 623 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 TYRP1P17643 537 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 MMP13P45452 471 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms