RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 TRIM10Q9UDY6 481 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 BZW2Q9Y6E2 419 aaKnown RBP8.84□□□□□ -0.99
HDAC3-211ENST00000491581 GCN1Q92616 2671 aaKnown RBP8.83□□□□□ -1
HDAC3-211ENST00000491581 NUDT21O43809 227 aaKnown RBP8.83□□□□□ -1
HDAC3-211ENST00000491581 MFAP3LO75121 409 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 PMPCBO75439 489 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 IVLP07476 585 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 H2AFZP0C0S5 128 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 TMEM253P0C7T8 217 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 FAM87AP0C7U9 286 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 ZNF8P17098 575 aaPredicted RBP8.83□□□□□ -1
HDAC3-211ENST00000491581 KELP23276 732 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 HNRNPH3P31942 346 aaKnown RBP8.83□□□□□ -1
HDAC3-211ENST00000491581 CD68P34810 354 aaPredicted RBP8.83□□□□□ -1
HDAC3-211ENST00000491581 SPINT3P49223 89 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 PPM1FP49593 454 aaPredicted RBP8.83□□□□□ -1
HDAC3-211ENST00000491581 ZNF135P52742 658 aaPredicted RBP8.83□□□□□ -1
HDAC3-211ENST00000491581 DPTQ07507 201 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 PPIDQ08752 370 aaKnown RBP8.83□□□□□ -1
HDAC3-211ENST00000491581 SEPT7Q16181 437 aaKnown RBP8.83□□□□□ -1
HDAC3-211ENST00000491581 HENMT1Q5T8I9 393 aaKnown RBP8.83□□□□□ -1
HDAC3-211ENST00000491581 KAZNQ674X7 775 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 ANKS6Q68DC2 871 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 H2AFVQ71UI9 128 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 ZNF438Q7Z4V0 828 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 PIM3Q86V86 326 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 RFX6Q8HWS3 928 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 VSTM4Q8IW00 320 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 UNC5BQ8IZJ1 945 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 BBS5Q8N3I7 341 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 ART4Q93070 314 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 HDAC11Q96DB2 347 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 CCDC97Q96F63 343 aaPredicted RBP8.83□□□□□ -1
HDAC3-211ENST00000491581 SCARF2Q96GP6 870 aaPredicted RBP8.83□□□□□ -1
HDAC3-211ENST00000491581 TMEM74Q96NL1 305 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 TSGA13Q96PP4 275 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 CCNL2Q96S94 520 aaPredicted RBP8.83□□□□□ -1
HDAC3-211ENST00000491581 DNAJC7Q99615 494 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 DPH1Q9BZG8 443 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 STRADBQ9C0K7 418 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 NHEJ1Q9H9Q4 299 aaPredicted RBP8.83□□□□□ -1
HDAC3-211ENST00000491581 TRNAU1APQ9NX07 287 aaKnown RBP8.83□□□□□ -1
HDAC3-211ENST00000491581 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.83□□□□□ -1
HDAC3-211ENST00000491581 RCOR3Q9P2K3 495 aaPredicted RBP8.83□□□□□ -1
HDAC3-211ENST00000491581 B3GALT1Q9Y5Z6 326 aa8.83□□□□□ -1
HDAC3-211ENST00000491581 ATRXP46100 2492 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 A0A0U1RQJ8 604 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 A6NCN8 305 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 ANKRD66B4E2M5 251 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 ERVH48-1M5A8F1 160 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 PSMD11O00231 422 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 AKR1B10O60218 316 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 CPNE6O95741 557 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 COMTP21964 271 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 GFERP55789 205 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 PPP1CAP62136 330 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 TPM4P67936 248 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 NR1D2Q14995 579 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 CLCA4Q14CN2 919 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 PDK2Q15119 407 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 KCTD19Q17RG1 926 aaPredicted RBP8.82□□□□□ -1
HDAC3-211ENST00000491581 ATP1A1-AS1Q5TC04 95 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 SLC9A4Q6AI14 798 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 AADACL2Q6P093 401 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 ZNF605Q86T29 641 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 FAM129CQ86XR2 697 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 DTX1Q86Y01 620 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 GALNT13Q8IUC8 556 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 SLC25A41Q8N5S1 370 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 OR8K1Q8NGG5 319 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 KIAA1524Q8TCG1 905 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 MARVELD3Q96A59 401 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 OLFM3Q96PB7 478 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 NRTNQ99748 197 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 MLPHQ9BV36 600 aaPredicted RBP8.82□□□□□ -1
HDAC3-211ENST00000491581 CDH19Q9H159 772 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 OR2AG1Q9H205 316 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 DEF6Q9H4E7 631 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 KCNK4Q9NYG8 393 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 OGFRQ9NZT2 677 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 UVRAGQ9P2Y5 699 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 DNAJC16Q9Y2G8 782 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 ZNF711Q9Y462 761 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 PCDHGA4Q9Y5G9 962 aa8.82□□□□□ -1
HDAC3-211ENST00000491581 RCCD1A6NED2 376 aa8.81□□□□□ -1
HDAC3-211ENST00000491581 EFCAB7A8K855 629 aa8.81□□□□□ -1
HDAC3-211ENST00000491581 PDE2AO00408 941 aaPredicted RBP8.81□□□□□ -1
HDAC3-211ENST00000491581 APOL1O14791 398 aa8.81□□□□□ -1
HDAC3-211ENST00000491581 DDX3YO15523 660 aaKnown RBP8.81□□□□□ -1
HDAC3-211ENST00000491581 DUX1O43812 170 aa8.81□□□□□ -1
HDAC3-211ENST00000491581 THRAP10827 490 aa8.81□□□□□ -1
HDAC3-211ENST00000491581 LIPCP11150 499 aa8.81□□□□□ -1
HDAC3-211ENST00000491581 LIFP15018 202 aa8.81□□□□□ -1
HDAC3-211ENST00000491581 PNLIPP16233 465 aa8.81□□□□□ -1
HDAC3-211ENST00000491581 BPIP17213 487 aa8.81□□□□□ -1
HDAC3-211ENST00000491581 TYRP1P17643 537 aa8.81□□□□□ -1
HDAC3-211ENST00000491581 NFKB1P19838 968 aa8.81□□□□□ -1
HDAC3-211ENST00000491581 PTPN3P26045 913 aa8.81□□□□□ -1
HDAC3-211ENST00000491581 LIMK2P53671 638 aa8.81□□□□□ -1
HDAC3-211ENST00000491581 DRG2P55039 364 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms