RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 RAD18Q9NS91 495 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 RXFP3Q9NSD7 469 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 IARS2Q9NSE4 1012 aaKnown RBP13.46□□□□□ -0.25
NUP188-208ENST00000491502 NLE1Q9NVX2 485 aaPredicted RBP13.46□□□□□ -0.25
NUP188-208ENST00000491502 DKK3Q9UBP4 350 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 IL36AQ9UHA7 158 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 ATXN2Q99700 1313 aaKnown RBP13.45□□□□□ -0.26
NUP188-208ENST00000491502 A0A1W2PP55 124 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 LRRC72A6NJI9 287 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 C4orf47A7E2U8 309 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 C1QTNF3-AMACRE9PGA6 284 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 RNASEH2AO75792 299 aaKnown RBP13.45□□□□□ -0.26
NUP188-208ENST00000491502 PIGNO95427 931 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 C1QAP02745 245 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 PDHA1P08559 390 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 BRAFP15056 766 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 ENGP17813 658 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 HMGCLP35914 325 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 ABL2P42684 1182 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 ARCN1P48444 511 aaKnown RBP13.45□□□□□ -0.26
NUP188-208ENST00000491502 PSMD8P48556 350 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 SLC18A1P54219 525 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 EXOC3L1Q86VI1 746 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 TMIEQ8NEW7 156 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 OR2T34Q8NGX1 318 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 OR6K2Q8NGY2 324 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 ECHDC3Q96DC8 303 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 SGSM3Q96HU1 749 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 LYSMD1Q96S90 227 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 TCF12Q99081 682 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 SELENOSQ9BQE4 189 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 ZDHHC5Q9C0B5 715 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 IQCGQ9H095 443 aaKnown RBP13.45□□□□□ -0.26
NUP188-208ENST00000491502 C6orf106Q9H6K1 298 aaPredicted RBP13.45□□□□□ -0.26
NUP188-208ENST00000491502 ZFYVE1Q9HBF4 777 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 KCNK9Q9NPC2 374 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 DYRK4Q9NR20 520 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 CTNNAL1Q9UBT7 734 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 APPL1Q9UKG1 709 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 PPM1HQ9ULR3 514 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 CORO1CQ9ULV4 474 aaPredicted RBP13.45□□□□□ -0.26
NUP188-208ENST00000491502 PPIL1Q9Y3C6 166 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 ZNF711Q9Y462 761 aa13.45□□□□□ -0.26
NUP188-208ENST00000491502 DCDC2BA2VCK2 349 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 CAPN8A6NHC0 703 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 CXorf49A8MYA2 514 aaPredicted RBP13.44□□□□□ -0.26
NUP188-208ENST00000491502 TRIM49D1C9J1S8 452 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 ARHGAP33O14559 1287 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 CDX4O14627 284 aaPredicted RBP13.44□□□□□ -0.26
NUP188-208ENST00000491502 TM4SF5O14894 197 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 BCAT2O15382 392 aaPredicted RBP13.44□□□□□ -0.26
NUP188-208ENST00000491502 FAM155BO75949 473 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 UGT2B4P06133 528 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 ZNF30P17039 623 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 OGNP20774 298 aaKnown RBP13.44□□□□□ -0.26
NUP188-208ENST00000491502 PSMA3P25788 255 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 MAOBP27338 520 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 PMLP29590 882 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 CD151P48509 253 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 CCT5P48643 541 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 FASTKD1Q53R41 847 aaKnown RBP13.44□□□□□ -0.26
NUP188-208ENST00000491502 ZNF805Q5CZA5 627 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 RNF187Q5TA31 235 aaPredicted RBP13.44□□□□□ -0.26
NUP188-208ENST00000491502 ERAP2Q6P179 960 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 CCDC91Q7Z6B0 441 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 CYP4X1Q8N118 509 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 HDDC3Q8N4P3 179 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 C2CD4AQ8NCU7 369 aaPredicted RBP13.44□□□□□ -0.26
NUP188-208ENST00000491502 GPR150Q8NGU9 434 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 OR4L1Q8NH43 312 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 HDAC10Q969S8 669 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 SCRN2Q96FV2 425 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 RBBP8Q99708 897 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 TRIM56Q9BRZ2 755 aaKnown RBP13.44□□□□□ -0.26
NUP188-208ENST00000491502 MIR1-1HGQ9H1L0 117 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 KDM4CQ9H3R0 1056 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 RHOJQ9H4E5 214 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 SMYD2Q9NRG4 433 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 CATSPERZQ9NTU4 200 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 EIF2B4Q9UI10 523 aaKnown RBP13.44□□□□□ -0.26
NUP188-208ENST00000491502 ADAM21Q9UKJ8 722 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.44□□□□□ -0.26
NUP188-208ENST00000491502 ARL5AQ9Y689 179 aa13.44□□□□□ -0.26
NUP188-208ENST00000491502 C1orf232A0A0U1RR37 186 aa13.43□□□□□ -0.26
NUP188-208ENST00000491502 TSPAN11A1L157 253 aa13.43□□□□□ -0.26
NUP188-208ENST00000491502 CCDC78A2IDD5 438 aa13.43□□□□□ -0.26
NUP188-208ENST00000491502 FAM47DPA6NHR8 397 aa13.43□□□□□ -0.26
NUP188-208ENST00000491502 GOLGA8CPA6NN73 597 aa13.43□□□□□ -0.26
NUP188-208ENST00000491502 CD3EAPO15446 510 aaKnown RBP13.43□□□□□ -0.26
NUP188-208ENST00000491502 PRPF4O43172 522 aaKnown RBP eCLIP13.43□□□□□ -0.26
NUP188-208ENST00000491502 LEFTY1O75610 366 aa13.43□□□□□ -0.26
NUP188-208ENST00000491502 FSBPO95073 299 aa13.43□□□□□ -0.26
NUP188-208ENST00000491502 ZWINTO95229 277 aa13.43□□□□□ -0.26
NUP188-208ENST00000491502 ITGA2BP08514 1039 aa13.43□□□□□ -0.26
NUP188-208ENST00000491502 KRT4P19013 534 aa13.43□□□□□ -0.26
NUP188-208ENST00000491502 CD27P26842 260 aa13.43□□□□□ -0.26
NUP188-208ENST00000491502 SERPINB8P50452 374 aa13.43□□□□□ -0.26
NUP188-208ENST00000491502 CCR5P51681 352 aa13.43□□□□□ -0.26
NUP188-208ENST00000491502 ZNF140P52738 457 aaPredicted RBP13.43□□□□□ -0.26
NUP188-208ENST00000491502 LIMK2P53671 638 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms