RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 RPLP0P05388 317 aaKnown RBP11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 NOS2P35228 1153 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 RAB25P57735 213 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 MAD2L1Q13257 205 aaPredicted RBP11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 TSTA3Q13630 321 aaPredicted RBP11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 TSNQ15631 228 aaKnown RBP11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 TMPRSS11AQ6ZMR5 421 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 CADM3Q8N126 398 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 TMEM132CQ8N3T6 1108 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 LZTR1Q8N653 840 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 OR7G1Q8NGA0 311 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 SPPL2AQ8TCT8 520 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 ATL1Q8WXF7 558 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 WNT8BQ93098 351 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 GPR22Q99680 433 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 ACO2Q99798 780 aaKnown RBP11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 PRRG3Q9BZD7 231 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 HDHD2Q9H0R4 259 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 AKTIPQ9H8T0 292 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 FBRSL1Q9HCM7 1045 aaKnown RBP11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 TAS2R13Q9NYV9 303 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 ZNF224Q9NZL3 707 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 SNX7Q9UNH6 387 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 LAMB4A4D0S4 1761 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 ECM29Q5VYK3 1845 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 TCRBV3S1A0A5B6 114 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 ANKRD34BA5PLL1 514 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 GUCY1B2O75343 617 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 SERPINA1P01009 418 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 GTF2E2P29084 291 aaKnown RBP11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 ALDH7A1P49419 539 aaKnown RBP11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 SLC36A3Q495N2 470 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 RABL3Q5HYI8 236 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 SYCE2Q6PIF2 218 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 FAM131AQ6UXB0 335 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 VSIG10LQ86VR7 867 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 IQCF2Q8IXL9 164 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 GOLM1Q8NBJ4 401 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 SPPL2BQ8TCT7 592 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 FCGR1BQ92637 280 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 VRTNQ9H8Y1 702 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 GPN2Q9H9Y4 310 aaPredicted RBP11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 NECTIN3Q9NQS3 549 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 MKLN1Q9UL63 735 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 CDH7Q9ULB5 785 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 CICQ96RK0 1608 aaPredicted RBP11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 MYO18AQ92614 2054 aaKnown RBP11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 LOC100130705A0A1B0GUX0 176 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 EPN2O95208 641 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 CD4P01730 458 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 CYP11A1P05108 521 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 SLC2A3P11169 496 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 PIM1P11309 404 aaPredicted RBP11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 DDX5P17844 614 aaKnown RBP11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 RCVRNP35243 200 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 FOXM1Q08050 763 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 PPP1R8Q12972 351 aaKnown RBP11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 PPP1R3AQ16821 1122 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 PPP1R26Q5T8A7 1209 aaPredicted RBP11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 CNSTQ6PJW8 725 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 ZC3HC1Q86WB0 502 aaKnown RBP11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 DCP1BQ8IZD4 617 aaKnown RBP11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 POP5Q969H6 163 aaKnown RBP11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 TPD52L3Q96J77 140 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 PAK1IP1Q9NWT1 392 aaPredicted RBP11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 ZNF70Q9UC06 446 aaPredicted RBP11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 VPS9D1Q9Y2B5 631 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 ZNF541Q9H0D2 1346 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 BTN3A1O00481 513 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 NRP1O14786 923 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 GRID2O43424 1007 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 INMTO95050 263 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 MATN1P21941 496 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 ZNF45Q02386 682 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 NIPAL4Q0D2K0 466 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 CRY1Q16526 586 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 DPYSL2Q16555 572 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 TBRG1Q3YBR2 411 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 STRADAQ7RTN6 431 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 MAVSQ7Z434 540 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 DCP2Q8IU60 420 aaKnown RBP11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 RIOX2Q8IUF8 465 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 BBS7Q8IWZ6 715 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 FAM9CQ8IZT9 166 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 PYROXD2Q8N2H3 581 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 APOL5Q9BWW9 433 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 TDRD1Q9BXT4 1180 aaKnown RBP11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 DSN1Q9H410 356 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 LATS2Q9NRM7 1088 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 RWDD3Q9Y3V2 267 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 TIMM22Q9Y584 194 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 CSADQ9Y600 493 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 SPATA31A5Q5VU36 1347 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 SPATA31A7Q8IWB4 1347 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 FAM240BA0A1B0GVZ2 78 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 MLYCDO95822 493 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 HOXB6P17509 224 aaKnown RBP11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 TKTL1P51854 596 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 CD83Q01151 205 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms