RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 COX14Q96I36 57 aa19.57■□□□□ 0.72
SREBF1-216ENST00000490796 VPS18Q9P253 973 aa19.57■□□□□ 0.72
SREBF1-216ENST00000490796 HEY1Q9Y5J3 304 aa19.57■□□□□ 0.72
SREBF1-216ENST00000490796 HEMK1Q9Y5R4 338 aaPredicted RBP19.57■□□□□ 0.72
SREBF1-216ENST00000490796 LRRD1A4D1F6 860 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 ANKRD66B4E2M5 251 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 KCNK1O00180 336 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 DUX1O43812 170 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 AKR1B10O60218 316 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 PRLP01236 227 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 ITGB2P05107 769 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 TPM1P09493 284 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 SLC2A4P14672 509 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 KDELR1P24390 212 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 MAN1A1P33908 653 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 SPINT3P49223 89 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 TMEM71Q6P5X7 295 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 FAM129CQ86XR2 697 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 PQLC3Q8N755 202 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 JPH3Q8WXH2 748 aaPredicted RBP19.56■□□□□ 0.72
SREBF1-216ENST00000490796 EXTL1Q92935 676 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 SH3KBP1Q96B97 665 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 FAF2Q96CS3 445 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 RNF157Q96PX1 679 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 LYSMD1Q96S90 227 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 PACSIN1Q9BY11 444 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 FAM117AQ9C073 453 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 RMI1Q9H9A7 625 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 SLC39A1Q9NY26 324 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 DTLQ9NZJ0 730 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 PRKAB1Q9Y478 270 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 PCDHGA4Q9Y5G9 962 aa19.56■□□□□ 0.72
SREBF1-216ENST00000490796 RGSL1A5PLK6 1076 aa19.55■□□□□ 0.72
SREBF1-216ENST00000490796 CBFA2T2O43439 604 aa19.55■□□□□ 0.72
SREBF1-216ENST00000490796 SLC28A2O43868 658 aa19.55■□□□□ 0.72
SREBF1-216ENST00000490796 SNX2O60749 519 aa19.55■□□□□ 0.72
SREBF1-216ENST00000490796 THRAP10827 490 aa19.55■□□□□ 0.72
SREBF1-216ENST00000490796 FGF3P11487 239 aaPredicted RBP19.55■□□□□ 0.72
SREBF1-216ENST00000490796 FASLGP48023 281 aa19.55■□□□□ 0.72
SREBF1-216ENST00000490796 HHEXQ03014 270 aa19.55■□□□□ 0.72
SREBF1-216ENST00000490796 AP1B1Q10567 949 aa19.55■□□□□ 0.72
SREBF1-216ENST00000490796 SQSTM1Q13501 440 aa19.55■□□□□ 0.72
SREBF1-216ENST00000490796 TRIM14Q14142 442 aa19.55■□□□□ 0.72
SREBF1-216ENST00000490796 IHHQ14623 411 aa19.55■□□□□ 0.72
SREBF1-216ENST00000490796 QPCTQ16769 361 aa19.55■□□□□ 0.72
SREBF1-216ENST00000490796 SNAP47Q5SQN1 464 aa19.55■□□□□ 0.72
SREBF1-216ENST00000490796 ZNF761Q86XN6 746 aaPredicted RBP19.55■□□□□ 0.72
SREBF1-216ENST00000490796 DTX1Q86Y01 620 aa19.55■□□□□ 0.72
SREBF1-216ENST00000490796 SFRP1Q8N474 314 aa19.55■□□□□ 0.72
SREBF1-216ENST00000490796 IL22RA1Q8N6P7 574 aa19.55■□□□□ 0.72
SREBF1-216ENST00000490796 OR8K1Q8NGG5 319 aa19.55■□□□□ 0.72
SREBF1-216ENST00000490796 RAPGEF5Q92565 580 aa19.55■□□□□ 0.72
SREBF1-216ENST00000490796 ART4Q93070 314 aa19.55■□□□□ 0.72
SREBF1-216ENST00000490796 ASPSCR1Q9BZE9 553 aa19.55■□□□□ 0.72
SREBF1-216ENST00000490796 XPO4Q9C0E2 1151 aaKnown RBP19.55■□□□□ 0.72
SREBF1-216ENST00000490796 PCDHGA3Q9Y5H0 932 aa19.55■□□□□ 0.72
SREBF1-216ENST00000490796 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.54■□□□□ 0.72
SREBF1-216ENST00000490796 TMEM253P0C7T8 217 aa19.54■□□□□ 0.72
SREBF1-216ENST00000490796 ACP5P13686 325 aa19.54■□□□□ 0.72
SREBF1-216ENST00000490796 HNRNPH3P31942 346 aaKnown RBP19.54■□□□□ 0.72
SREBF1-216ENST00000490796 SLC10A2Q12908 348 aaPredicted RBP19.54■□□□□ 0.72
SREBF1-216ENST00000490796 NFATC3Q12968 1075 aa19.54■□□□□ 0.72
SREBF1-216ENST00000490796 NFATC2Q13469 925 aa19.54■□□□□ 0.72
SREBF1-216ENST00000490796 DCAF12Q5T6F0 453 aa19.54■□□□□ 0.72
SREBF1-216ENST00000490796 PRICKLE2Q7Z3G6 844 aa19.54■□□□□ 0.72
SREBF1-216ENST00000490796 SLC9B2Q86UD5 537 aa19.54■□□□□ 0.72
SREBF1-216ENST00000490796 HERPUD2Q9BSE4 406 aa19.54■□□□□ 0.72
SREBF1-216ENST00000490796 SPATA16Q9BXB7 569 aa19.54■□□□□ 0.72
SREBF1-216ENST00000490796 ZFYVE1Q9HBF4 777 aa19.54■□□□□ 0.72
SREBF1-216ENST00000490796 NENFQ9UMX5 172 aa19.54■□□□□ 0.72
SREBF1-216ENST00000490796 KCNK6Q9Y257 313 aa19.54■□□□□ 0.72
SREBF1-216ENST00000490796 OAS3Q9Y6K5 1087 aaKnown RBP19.54■□□□□ 0.72
SREBF1-216ENST00000490796 EFCAB7A8K855 629 aa19.53■□□□□ 0.72
SREBF1-216ENST00000490796 APOL1O14791 398 aa19.53■□□□□ 0.72
SREBF1-216ENST00000490796 PPP1R12AO14974 1030 aaPredicted RBP19.53■□□□□ 0.72
SREBF1-216ENST00000490796 DNAJC6O75061 913 aa19.53■□□□□ 0.72
SREBF1-216ENST00000490796 SLC4A1P02730 911 aa19.53■□□□□ 0.72
SREBF1-216ENST00000490796 SFTPCP11686 197 aa19.53■□□□□ 0.72
SREBF1-216ENST00000490796 ZFXP17010 805 aaPredicted RBP19.53■□□□□ 0.72
SREBF1-216ENST00000490796 PTMSP20962 102 aa19.53■□□□□ 0.72
SREBF1-216ENST00000490796 CSF2RBP32927 897 aa19.53■□□□□ 0.72
SREBF1-216ENST00000490796 MAPK9P45984 424 aa19.53■□□□□ 0.72
SREBF1-216ENST00000490796 NOP2P46087 812 aaKnown RBP19.53■□□□□ 0.72
SREBF1-216ENST00000490796 RAB15P59190 212 aa19.53■□□□□ 0.72
SREBF1-216ENST00000490796 IFI35P80217 286 aaPredicted RBP19.53■□□□□ 0.72
SREBF1-216ENST00000490796 PPIDQ08752 370 aaKnown RBP19.53■□□□□ 0.72
SREBF1-216ENST00000490796 GALNT3Q14435 633 aa19.53■□□□□ 0.72
SREBF1-216ENST00000490796 PDK1Q15118 436 aa19.53■□□□□ 0.72
SREBF1-216ENST00000490796 ZNF569Q5MCW4 686 aa19.53■□□□□ 0.72
SREBF1-216ENST00000490796 HENMT1Q5T8I9 393 aaKnown RBP19.53■□□□□ 0.72
SREBF1-216ENST00000490796 CCDC70Q6NSX1 233 aa19.53■□□□□ 0.72
SREBF1-216ENST00000490796 LYSMD3Q7Z3D4 306 aa19.53■□□□□ 0.72
SREBF1-216ENST00000490796 KDELC2Q7Z4H8 507 aa19.53■□□□□ 0.72
SREBF1-216ENST00000490796 PHYKPLQ8IUZ5 450 aa19.53■□□□□ 0.72
SREBF1-216ENST00000490796 AVL9Q8NBF6 648 aa19.53■□□□□ 0.72
SREBF1-216ENST00000490796 NCSTNQ92542 709 aa19.53■□□□□ 0.72
SREBF1-216ENST00000490796 DDA1Q9BW61 102 aa19.53■□□□□ 0.72
SREBF1-216ENST00000490796 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.53■□□□□ 0.72
SREBF1-216ENST00000490796 SARS2Q9NP81 518 aaKnown RBP19.53■□□□□ 0.72
SREBF1-216ENST00000490796 RAD18Q9NS91 495 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms