RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 NXPE1Q8N323 547 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 RIBC1Q8N443 379 aaPredicted RBP13.16□□□□□ -0.3
SNX12-205ENST00000490561 PPM1NQ8N819 430 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 TP53I13Q8NBR0 393 aaPredicted RBP13.16□□□□□ -0.3
SNX12-205ENST00000490561 SCAMP4Q969E2 229 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 TMEM109Q9BVC6 243 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 ZCCHC2Q9C0B9 1178 aaKnown RBP13.16□□□□□ -0.3
SNX12-205ENST00000490561 EPHX3Q9H6B9 360 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 C6orf106Q9H6K1 298 aaPredicted RBP13.16□□□□□ -0.3
SNX12-205ENST00000490561 CD93Q9NPY3 652 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 CD84Q9UIB8 345 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 ZNF180Q9UJW8 692 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 FBXO5Q9UKT4 447 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 PLAAQ9Y263 795 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 FNDC3AQ9Y2H6 1198 aaKnown RBP13.16□□□□□ -0.3
SNX12-205ENST00000490561 HS3ST3A1Q9Y663 406 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 ZNF106Q9H2Y7 1883 aaKnown RBP13.16□□□□□ -0.3
SNX12-205ENST00000490561 SCN8AQ9UQD0 1980 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 OR51F1A6NGY5 319 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 GOLGA8CPA6NN73 597 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 PRAMEF26H0Y7S4 382 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 FPGTO14772 594 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 GPR37L1O60883 481 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 NDUFS3O75489 264 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 FSBPO95073 299 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 PAK4O96013 591 aaPredicted RBP13.15□□□□□ -0.3
SNX12-205ENST00000490561 C1QAP02745 245 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 HOXC4P09017 264 aaPredicted RBP13.15□□□□□ -0.3
SNX12-205ENST00000490561 ZNF7P17097 686 aaPredicted RBP13.15□□□□□ -0.3
SNX12-205ENST00000490561 ACRV1P26436 265 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 SPRP35270 261 aaPredicted RBP13.15□□□□□ -0.3
SNX12-205ENST00000490561 SLC1A2P43004 574 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 PTGER3P43115 390 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 LEPRP48357 1165 aaKnown RBP13.15□□□□□ -0.3
SNX12-205ENST00000490561 CD151P48509 253 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 FNTBP49356 437 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 RPL6Q02878 288 aaKnown RBP13.15□□□□□ -0.3
SNX12-205ENST00000490561 IRF4Q15306 451 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 WSCD2Q2TBF2 565 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 ATP13A5Q4VNC0 1218 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 PNCKQ6P2M8 343 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 RFLNAQ6ZTI6 216 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 SERPINA9Q86WD7 417 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 TDRPQ86YL5 185 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 UNC5BQ8IZJ1 945 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 RBFAQ8N0V3 343 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 IQCKQ8N0W5 287 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 UHMK1Q8TAS1 419 aaKnown RBP13.15□□□□□ -0.3
SNX12-205ENST00000490561 BTN2A2Q8WVV5 523 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 SLC44A1Q8WWI5 657 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 RLN3Q8WXF3 142 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 GLYATL1Q969I3 302 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 CENPTQ96BT3 561 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 PAFAH2Q99487 392 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 C1QTNF1Q9BXJ1 281 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 PHPT1Q9NRX4 125 aaPredicted RBP13.15□□□□□ -0.3
SNX12-205ENST00000490561 ZDHHC3Q9NYG2 299 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 PSMC3IPQ9P2W1 217 aaPredicted RBP13.15□□□□□ -0.3
SNX12-205ENST00000490561 COMMD10Q9Y6G5 202 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 PLXND1Q9Y4D7 1925 aa13.15□□□□□ -0.3
SNX12-205ENST00000490561 PLXNA2O75051 1894 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 GOLGA6L10A6NI86 522 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 METTL12A8MUP2 240 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 MEI4A8MW99 385 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 GPR89AB7ZAQ6 455 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 GOLGA8KD6RF30 607 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 H3BMM5 538 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 GOLGA8TH3BQL2 631 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 QSOX1O00391 747 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 RASGRF2O14827 1237 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 CDH16O75309 829 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 KRT38O76015 456 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 PCCBP05166 539 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 IGHV4-34P06331 123 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 GPR89BP0CG08 455 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 MAT2AP31153 395 aaKnown RBP13.14□□□□□ -0.31
SNX12-205ENST00000490561 NSG1P42857 185 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 POLD2P49005 469 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 ADARP55265 1226 aaKnown RBP13.14□□□□□ -0.31
SNX12-205ENST00000490561 FGL2Q14314 439 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 TMEM31Q5JXX7 168 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 WDR45BQ5MNZ6 344 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 PSAPL1Q6NUJ1 521 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 PACS1Q6VY07 963 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 LPCAT2Q7L5N7 544 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 STRA8Q7Z7C7 330 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 MAML2Q8IZL2 1156 aaPredicted RBP13.14□□□□□ -0.31
SNX12-205ENST00000490561 DDHD1Q8NEL9 900 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 GAB3Q8WWW8 586 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 NELL1Q92832 810 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 DCUN1D1Q96GG9 259 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 HIC2Q96JB3 615 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 AGAP2Q99490 1192 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 COPS8Q99627 209 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 DHRS4Q9BTZ2 278 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 DUSP15Q9H1R2 295 aaPredicted RBP13.14□□□□□ -0.31
SNX12-205ENST00000490561 WDR26Q9H7D7 661 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 SMYD2Q9NRG4 433 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 ZSCAN32Q9NX65 697 aa13.14□□□□□ -0.31
SNX12-205ENST00000490561 IL1RAPL1Q9NZN1 696 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms