RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 FSD1LQ9BXM9 530 aa17.32■□□□□ 0.36
SEC13-218ENST00000490283 RSPH14Q9UHP6 348 aa17.32■□□□□ 0.36
SEC13-218ENST00000490283 EFR3BQ9Y2G0 817 aa17.32■□□□□ 0.36
SEC13-218ENST00000490283 PCDHGA8Q9Y5G5 932 aa17.32■□□□□ 0.36
SEC13-218ENST00000490283 DUSP10Q9Y6W6 482 aa17.32■□□□□ 0.36
SEC13-218ENST00000490283 MYLKQ15746 1914 aa17.31■□□□□ 0.36
SEC13-218ENST00000490283 URB1O60287 2271 aaKnown RBP17.31■□□□□ 0.36
SEC13-218ENST00000490283 A0A1W2PQM1 296 aa17.31■□□□□ 0.36
SEC13-218ENST00000490283 PJA2O43164 708 aa17.31■□□□□ 0.36
SEC13-218ENST00000490283 ZNF189O75820 626 aaPredicted RBP17.31■□□□□ 0.36
SEC13-218ENST00000490283 ECEL1O95672 775 aa17.31■□□□□ 0.36
SEC13-218ENST00000490283 ATP1A1P05023 1023 aaKnown RBP17.31■□□□□ 0.36
SEC13-218ENST00000490283 MLLT3P42568 568 aaPredicted RBP17.31■□□□□ 0.36
SEC13-218ENST00000490283 MAZP56270 477 aaKnown RBP17.31■□□□□ 0.36
SEC13-218ENST00000490283 WNT3AP56704 352 aa17.31■□□□□ 0.36
SEC13-218ENST00000490283 CCDC173Q0VFZ6 552 aa17.31■□□□□ 0.36
SEC13-218ENST00000490283 MAP9Q49MG5 647 aa17.31■□□□□ 0.36
SEC13-218ENST00000490283 FAM182AQ5T1J6 154 aa17.31■□□□□ 0.36
SEC13-218ENST00000490283 PDPK2PQ6A1A2 396 aa17.31■□□□□ 0.36
SEC13-218ENST00000490283 ITPRIPL1Q6GPH6 555 aa17.31■□□□□ 0.36
SEC13-218ENST00000490283 IGF2-ASQ6U949 168 aa17.31■□□□□ 0.36
SEC13-218ENST00000490283 TMC3Q7Z5M5 1100 aa17.31■□□□□ 0.36
SEC13-218ENST00000490283 CDKL3Q8IVW4 592 aaPredicted RBP17.31■□□□□ 0.36
SEC13-218ENST00000490283 ZNF567Q8N184 647 aa17.31■□□□□ 0.36
SEC13-218ENST00000490283 TRAM1L1Q8N609 369 aa17.31■□□□□ 0.36
SEC13-218ENST00000490283 UBL4BQ8N7F7 174 aa17.31■□□□□ 0.36
SEC13-218ENST00000490283 SPC24Q8NBT2 197 aa17.31■□□□□ 0.36
SEC13-218ENST00000490283 PTCD2Q8WV60 388 aaKnown RBP17.31■□□□□ 0.36
SEC13-218ENST00000490283 FCRL5Q96RD9 977 aa17.31■□□□□ 0.36
SEC13-218ENST00000490283 OSBPL8Q9BZF1 889 aa17.31■□□□□ 0.36
SEC13-218ENST00000490283 TRABDQ9H4I3 376 aa17.31■□□□□ 0.36
SEC13-218ENST00000490283 STN1Q9H668 368 aaKnown RBP17.31■□□□□ 0.36
SEC13-218ENST00000490283 AMFRQ9UKV5 643 aa17.31■□□□□ 0.36
SEC13-218ENST00000490283 REXO2Q9Y3B8 237 aaKnown RBP17.31■□□□□ 0.36
SEC13-218ENST00000490283 FREM2Q5SZK8 3169 aa17.3■□□□□ 0.36
SEC13-218ENST00000490283 FADS2P1A8MWK0 482 aa17.3■□□□□ 0.36
SEC13-218ENST00000490283 TJP3O95049 919 aa17.3■□□□□ 0.36
SEC13-218ENST00000490283 SLC25A14O95258 325 aaPredicted RBP17.3■□□□□ 0.36
SEC13-218ENST00000490283 EPOP01588 193 aa17.3■□□□□ 0.36
SEC13-218ENST00000490283 SLC2A4P14672 509 aa17.3■□□□□ 0.36
SEC13-218ENST00000490283 ALDH4A1P30038 563 aa17.3■□□□□ 0.36
SEC13-218ENST00000490283 CD68P34810 354 aaPredicted RBP17.3■□□□□ 0.36
SEC13-218ENST00000490283 PTPN7P35236 360 aa17.3■□□□□ 0.36
SEC13-218ENST00000490283 MPP3Q13368 585 aa17.3■□□□□ 0.36
SEC13-218ENST00000490283 NOMO1Q15155 1222 aa17.3■□□□□ 0.36
SEC13-218ENST00000490283 BROXQ5VW32 411 aa17.3■□□□□ 0.36
SEC13-218ENST00000490283 CHST15Q7LFX5 561 aaPredicted RBP17.3■□□□□ 0.36
SEC13-218ENST00000490283 PEX26Q7Z412 305 aa17.3■□□□□ 0.36
SEC13-218ENST00000490283 PDZD3Q86UT5 571 aa17.3■□□□□ 0.36
SEC13-218ENST00000490283 PHYKPLQ8IUZ5 450 aa17.3■□□□□ 0.36
SEC13-218ENST00000490283 SFTPA2Q8IWL1 248 aa17.3■□□□□ 0.36
SEC13-218ENST00000490283 IPMKQ8NFU5 416 aa17.3■□□□□ 0.36
SEC13-218ENST00000490283 WDR24Q96S15 920 aa17.3■□□□□ 0.36
SEC13-218ENST00000490283 FOXP3Q9BZS1 431 aa17.3■□□□□ 0.36
SEC13-218ENST00000490283 LACRTQ9GZZ8 138 aa17.3■□□□□ 0.36
SEC13-218ENST00000490283 ZMYND15Q9H091 742 aa17.3■□□□□ 0.36
SEC13-218ENST00000490283 CARD9Q9H257 536 aa17.3■□□□□ 0.36
SEC13-218ENST00000490283 HACD3Q9P035 362 aa17.3■□□□□ 0.36
SEC13-218ENST00000490283 AKAP7Q9P0M2 348 aaPredicted RBP17.3■□□□□ 0.36
SEC13-218ENST00000490283 NFKBIL1Q9UBC1 381 aaPredicted RBP17.3■□□□□ 0.36
SEC13-218ENST00000490283 ASXL3Q9C0F0 2248 aa17.3■□□□□ 0.36
SEC13-218ENST00000490283 GOLGA6L9A6NEM1 432 aa17.29■□□□□ 0.36
SEC13-218ENST00000490283 GPR89AB7ZAQ6 455 aa17.29■□□□□ 0.36
SEC13-218ENST00000490283 F5H423 210 aaPredicted RBP17.29■□□□□ 0.36
SEC13-218ENST00000490283 PLD2O14939 933 aa17.29■□□□□ 0.36
SEC13-218ENST00000490283 ANXA9O76027 345 aa17.29■□□□□ 0.36
SEC13-218ENST00000490283 GPR89BP0CG08 455 aa17.29■□□□□ 0.36
SEC13-218ENST00000490283 HLA-DPA1P20036 260 aa17.29■□□□□ 0.36
SEC13-218ENST00000490283 RBL1P28749 1068 aa17.29■□□□□ 0.36
SEC13-218ENST00000490283 CCKBRP32239 447 aa17.29■□□□□ 0.36
SEC13-218ENST00000490283 GPR3P46089 330 aa17.29■□□□□ 0.36
SEC13-218ENST00000490283 PPM1FP49593 454 aaPredicted RBP17.29■□□□□ 0.36
SEC13-218ENST00000490283 PDX1P52945 283 aa17.29■□□□□ 0.36
SEC13-218ENST00000490283 EIF3EP60228 445 aaKnown RBP17.29■□□□□ 0.36
SEC13-218ENST00000490283 OTUD4Q01804 1114 aaKnown RBP17.29■□□□□ 0.36
SEC13-218ENST00000490283 PRPSAP1Q14558 356 aa17.29■□□□□ 0.36
SEC13-218ENST00000490283 CLPPQ16740 277 aaPredicted RBP17.29■□□□□ 0.36
SEC13-218ENST00000490283 AMZ1Q400G9 498 aa17.29■□□□□ 0.36
SEC13-218ENST00000490283 ZDHHC20Q5W0Z9 365 aa17.29■□□□□ 0.36
SEC13-218ENST00000490283 RAB11FIP2Q7L804 512 aa17.29■□□□□ 0.36
SEC13-218ENST00000490283 B3GNT8Q7Z7M8 397 aa17.29■□□□□ 0.36
SEC13-218ENST00000490283 PIM3Q86V86 326 aa17.29■□□□□ 0.36
SEC13-218ENST00000490283 C17orf82Q86X59 251 aaPredicted RBP17.29■□□□□ 0.36
SEC13-218ENST00000490283 NAGSQ8N159 534 aa17.29■□□□□ 0.36
SEC13-218ENST00000490283 FBXO39Q8N4B4 442 aa17.29■□□□□ 0.36
SEC13-218ENST00000490283 SLC25A41Q8N5S1 370 aa17.29■□□□□ 0.36
SEC13-218ENST00000490283 GPR26Q8NDV2 337 aa17.29■□□□□ 0.36
SEC13-218ENST00000490283 ACTL9Q8TC94 416 aa17.29■□□□□ 0.36
SEC13-218ENST00000490283 TMEM159Q96B96 161 aa17.29■□□□□ 0.36
SEC13-218ENST00000490283 LRRC45Q96CN5 670 aa17.29■□□□□ 0.36
SEC13-218ENST00000490283 CCDC97Q96F63 343 aaPredicted RBP17.29■□□□□ 0.36
SEC13-218ENST00000490283 SLC46A1Q96NT5 459 aa17.29■□□□□ 0.36
SEC13-218ENST00000490283 RALYQ9UKM9 306 aaKnown RBP17.29■□□□□ 0.36
SEC13-218ENST00000490283 CNOT6Q9ULM6 557 aaKnown RBP17.29■□□□□ 0.36
SEC13-218ENST00000490283 PLEKHM1Q9Y4G2 1056 aa17.29■□□□□ 0.36
SEC13-218ENST00000490283 OAS3Q9Y6K5 1087 aaKnown RBP17.29■□□□□ 0.36
SEC13-218ENST00000490283 FAM208BQ5VWN6 2430 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 DMXL2Q8TDJ6 3036 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 LOC285095A0A1B0GVY8 99 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 GRID2IPA4D2P6 1211 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms