RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 SRSF1Q07955 248 aaKnown RBP eCLIP11.68□□□□□ -0.541e-7■□□□□ 10.1
FDPS-215ENST00000490140 HADHQ16836 314 aaKnown RBP11.68□□□□□ -0.54
FDPS-215ENST00000490140 SNAP47Q5SQN1 464 aa11.68□□□□□ -0.54
FDPS-215ENST00000490140 ALG1LQ6GMV1 187 aa11.68□□□□□ -0.54
FDPS-215ENST00000490140 CHST15Q7LFX5 561 aaPredicted RBP11.68□□□□□ -0.54
FDPS-215ENST00000490140 LYSMD3Q7Z3D4 306 aa11.68□□□□□ -0.54
FDPS-215ENST00000490140 ARHGAP22Q7Z5H3 698 aa11.68□□□□□ -0.54
FDPS-215ENST00000490140 ATCAYQ86WG3 371 aa11.68□□□□□ -0.54
FDPS-215ENST00000490140 PTRH1Q86Y79 214 aaKnown RBP11.68□□□□□ -0.54
FDPS-215ENST00000490140 PGBD5Q8N414 524 aa11.68□□□□□ -0.54
FDPS-215ENST00000490140 NIPA2Q8N8Q9 360 aa11.68□□□□□ -0.54
FDPS-215ENST00000490140 BMPERQ8N8U9 685 aa11.68□□□□□ -0.54
FDPS-215ENST00000490140 PIH1D2Q8WWB5 315 aa11.68□□□□□ -0.54
FDPS-215ENST00000490140 NCSTNQ92542 709 aa11.68□□□□□ -0.54
FDPS-215ENST00000490140 FATE1Q969F0 183 aa11.68□□□□□ -0.54
FDPS-215ENST00000490140 PMEPA1Q969W9 287 aa11.68□□□□□ -0.54
FDPS-215ENST00000490140 COX14Q96I36 57 aa11.68□□□□□ -0.54
FDPS-215ENST00000490140 HAUS4Q9H6D7 363 aa11.68□□□□□ -0.54
FDPS-215ENST00000490140 RAD18Q9NS91 495 aa11.68□□□□□ -0.54
FDPS-215ENST00000490140 OCIAD1Q9NX40 245 aa11.68□□□□□ -0.54
FDPS-215ENST00000490140 AIPL1Q9NZN9 384 aa11.68□□□□□ -0.54
FDPS-215ENST00000490140 TMEM9Q9P0T7 183 aa11.68□□□□□ -0.54
FDPS-215ENST00000490140 ANKMY1Q9P2S6 941 aa11.68□□□□□ -0.54
FDPS-215ENST00000490140 MYO1AQ9UBC5 1043 aa11.68□□□□□ -0.54
FDPS-215ENST00000490140 IP6K2Q9UHH9 426 aa11.68□□□□□ -0.54
FDPS-215ENST00000490140 TMEM98Q9Y2Y6 226 aa11.68□□□□□ -0.54
FDPS-215ENST00000490140 BZW2Q9Y6E2 419 aaKnown RBP11.68□□□□□ -0.54
FDPS-215ENST00000490140 SPTAN1Q13813 2472 aaKnown RBP11.68□□□□□ -0.54
FDPS-215ENST00000490140 SPTBN1Q01082 2364 aaKnown RBP11.68□□□□□ -0.54
FDPS-215ENST00000490140 MN1Q10571 1320 aaPredicted RBP11.67□□□□□ -0.54
FDPS-215ENST00000490140 A8MU76 341 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 MKRN2OSH3BPM6 223 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 INPP4BO15327 924 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 TOX3O15405 576 aaPredicted RBP11.67□□□□□ -0.54
FDPS-215ENST00000490140 FZD6O60353 706 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 MX2P20592 715 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 GARSP41250 739 aaKnown RBP11.67□□□□□ -0.54
FDPS-215ENST00000490140 STAT5AP42229 794 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 MAPK9P45984 424 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 FOXK1P85037 733 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 PTSQ03393 145 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 NFATC2Q13469 925 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 UBAP2LQ14157 1087 aaKnown RBP11.67□□□□□ -0.54
FDPS-215ENST00000490140 NCAPHQ15003 741 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 ANKRD20A8PQ5CZ79 823 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 CLEC17AQ6ZS10 378 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 TRIM74Q86UV6 250 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 TRIM48Q8IWZ4 208 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 TEX26Q8N6G2 289 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 SCAMP4Q969E2 229 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 ZNF830Q96NB3 372 aaPredicted RBP11.67□□□□□ -0.54
FDPS-215ENST00000490140 LYSMD1Q96S90 227 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 RIOK2Q9BVS4 552 aaKnown RBP11.67□□□□□ -0.54
FDPS-215ENST00000490140 TDRD1Q9BXT4 1180 aaKnown RBP11.67□□□□□ -0.54
FDPS-215ENST00000490140 ADGRE3Q9BY15 652 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 ULBP3Q9BZM4 244 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 TRIM7Q9C029 511 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 CARD9Q9H257 536 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 UCK1Q9HA47 277 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 PCDH18Q9HCL0 1135 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 LCMT1Q9UIC8 334 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 ST14Q9Y5Y6 855 aa11.67□□□□□ -0.54
FDPS-215ENST00000490140 USP9YO00507 2555 aaPredicted RBP11.66□□□□□ -0.54
FDPS-215ENST00000490140 C1orf232A0A0U1RR37 186 aa11.66□□□□□ -0.54
FDPS-215ENST00000490140 MATN3O15232 486 aa11.66□□□□□ -0.54
FDPS-215ENST00000490140 RARAP10276 462 aa11.66□□□□□ -0.54
FDPS-215ENST00000490140 ACP5P13686 325 aa11.66□□□□□ -0.54
FDPS-215ENST00000490140 IL1R2P27930 398 aa11.66□□□□□ -0.54
FDPS-215ENST00000490140 SSR1P43307 286 aaKnown RBP11.66□□□□□ -0.54
FDPS-215ENST00000490140 KLRB1Q12918 225 aa11.66□□□□□ -0.54
FDPS-215ENST00000490140 IFI16Q16666 785 aaKnown RBP11.66□□□□□ -0.54
FDPS-215ENST00000490140 SKIDA1Q1XH10 827 aa11.66□□□□□ -0.54
FDPS-215ENST00000490140 TDRD12Q587J7 1177 aaKnown RBP11.66□□□□□ -0.54
FDPS-215ENST00000490140 ZNF569Q5MCW4 686 aa11.66□□□□□ -0.54
FDPS-215ENST00000490140 IYDQ6PHW0 289 aa11.66□□□□□ -0.54
FDPS-215ENST00000490140 APTXQ7Z2E3 356 aaKnown RBP11.66□□□□□ -0.54
FDPS-215ENST00000490140 ZNF571Q7Z3V5 609 aaPredicted RBP11.66□□□□□ -0.54
FDPS-215ENST00000490140 ZNF761Q86XN6 746 aaPredicted RBP11.66□□□□□ -0.54
FDPS-215ENST00000490140 MAP7D3Q8IWC1 876 aa11.66□□□□□ -0.54
FDPS-215ENST00000490140 TP53INP2Q8IXH6 220 aa11.66□□□□□ -0.54
FDPS-215ENST00000490140 AOPEPQ8N6M6 819 aa11.66□□□□□ -0.54
FDPS-215ENST00000490140 PTCD2Q8WV60 388 aaKnown RBP11.66□□□□□ -0.54
FDPS-215ENST00000490140 SEC14L1Q92503 715 aa11.66□□□□□ -0.54
FDPS-215ENST00000490140 STAMBPL1Q96FJ0 436 aa11.66□□□□□ -0.54
FDPS-215ENST00000490140 NSMCE3Q96MG7 304 aa11.66□□□□□ -0.54
FDPS-215ENST00000490140 CTRCQ99895 268 aa11.66□□□□□ -0.54
FDPS-215ENST00000490140 ISCUQ9H1K1 167 aa11.66□□□□□ -0.54
FDPS-215ENST00000490140 FAM83DQ9H4H8 585 aa11.66□□□□□ -0.54
FDPS-215ENST00000490140 PCDH9Q9HC56 1237 aa11.66□□□□□ -0.54
FDPS-215ENST00000490140 LMBRD1Q9NUN5 540 aa11.66□□□□□ -0.54
FDPS-215ENST00000490140 ETNK2Q9NVF9 386 aa11.66□□□□□ -0.54
FDPS-215ENST00000490140 ANAPC7Q9UJX3 599 aa11.66□□□□□ -0.54
FDPS-215ENST00000490140 KCND3Q9UK17 655 aa11.66□□□□□ -0.54
FDPS-215ENST00000490140 TRBV23OR9-2A0A075B6M9 112 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 LOC101059948A0A1B0GTJ6 334 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 SMTNL1A8MU46 457 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 MYO1FO00160 1098 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 NKX2-8O15522 239 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 GRID2O43424 1007 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 SNX2O60749 519 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms