RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 CLN3Q13286 438 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 COL9A2Q14055 689 aaPredicted RBP9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 TEX44Q53QW1 395 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 NPNTQ6UXI9 565 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 TRIM74Q86UV6 250 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 NT5DC3Q86UY8 548 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 CCDC170Q8IYT3 715 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 SFRP1Q8N474 314 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 FBXO39Q8N4B4 442 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 Q8N9G6 341 aaPredicted RBP9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 TTC13Q8NBP0 860 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 LPCAT1Q8NF37 534 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 DTX3LQ8TDB6 740 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 ZNF830Q96NB3 372 aaPredicted RBP9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 MAK16Q9BXY0 300 aaKnown RBP9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 SEMA6CQ9H3T2 930 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 GLOD4Q9HC38 313 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 CD84Q9UIB8 345 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 ATXN7L1Q9ULK2 861 aaPredicted RBP9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 PLEKHM1Q9Y4G2 1056 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 OAS3Q9Y6K5 1087 aaKnown RBP9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 COL6A6A6NMZ7 2263 aa9.65□□□□□ -0.87
TMEM39A-210ENST00000490099 SCN8AQ9UQD0 1980 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 CFAP46Q8IYW2 2715 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 HELZ2Q9BYK8 2649 aaKnown RBP9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 C1orf232A0A0U1RR37 186 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 LOC285095A0A1B0GVY8 99 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 K7ENP7 123 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 HGSO14964 777 aaPredicted RBP9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 PPP1R12AO14974 1030 aaPredicted RBP9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 KLK10O43240 276 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 PSTPIP1O43586 416 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 NUAK1O60285 661 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 C1QL1O75973 258 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 NDST3O95803 873 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 EML2O95834 649 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 PTPN3P26045 913 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 SLC5A2P31639 672 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 CD68P34810 354 aaPredicted RBP9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 MAGEA1P43355 309 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 CLCNKAP51800 687 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 TMPRSS3P57727 454 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 OR1D5P58170 312 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 VAC14Q08AM6 782 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 TRA2AQ13595 282 aaKnown RBP eCLIP9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 TFDP2Q14188 446 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 BROXQ5VW32 411 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 IYDQ6PHW0 289 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 INO80CQ6PI98 192 aaPredicted RBP9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 SLC30A9Q6PML9 568 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 SPOCD1Q6ZMY3 1216 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 BZW1Q7L1Q6 419 aaKnown RBP9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 LYSMD3Q7Z3D4 306 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 PIM3Q86V86 326 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 GAS2L3Q86XJ1 694 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 DTX1Q86Y01 620 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 KATNAL2Q8IYT4 538 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 RCOR2Q8IZ40 523 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 PATE1Q8WXA2 126 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 AGAP3Q96P47 875 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 ZFYVE1Q9HBF4 777 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 PKD2L2Q9NZM6 624 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 SAE1Q9UBE0 346 aaPredicted RBP9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 MOSPD1Q9UJG1 213 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 VPS9D1Q9Y2B5 631 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 HYOU1Q9Y4L1 999 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 PCDHGA3Q9Y5H0 932 aa9.64□□□□□ -0.87
TMEM39A-210ENST00000490099 IGHV1OR21-1A0A087WYE8 117 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 IGHV5-10-1A0A0J9YXX1 117 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 RHPN2P1A8MT19 583 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 GPR89AB7ZAQ6 455 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 C9orf172C9J069 976 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 CHUKO15111 745 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 MTSS1O43312 755 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 KALRNO60229 2985 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 CST8O60676 142 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 ZRANB2O95218 330 aaKnown RBP eCLIP9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 KRT1P04264 644 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 GPR89BP0CG08 455 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 HGFP14210 728 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 PECAM1P16284 738 aaPredicted RBP9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 ETV5P41161 510 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 ACTR1BP42025 376 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 NOP2P46087 812 aaKnown RBP9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 ARSDP51689 593 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 LIMK2P53671 638 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 ACTR1AP61163 376 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 RHDQ02161 417 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 CDK18Q07002 472 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 AP1B1Q10567 949 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 C16orf72Q14CZ0 275 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 FAM182AQ5T1J6 154 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 PDPK2PQ6A1A2 396 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 ADGRD1Q6QNK2 874 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 KDELC1Q6UW63 502 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 USP53Q70EK8 1073 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 GALNT13Q8IUC8 556 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 GPR26Q8NDV2 337 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms