RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 HPS6Q86YV9 775 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 FNIP1Q8TF40 1166 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 CASKIN2Q8WXE0 1202 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 C9orf72Q96LT7 481 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 COQ10AQ96MF6 247 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 ZNF641Q96N77 438 aaPredicted RBP9.1□□□□□ -0.95
SSBP1-212ENST00000489378 OR2M4Q96R27 311 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 BARD1Q99728 777 aaKnown RBP9.1□□□□□ -0.95
SSBP1-212ENST00000489378 TBC1D10AQ9BXI6 508 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 RAB6CQ9H0N0 254 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 TMEM248Q9NWD8 314 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 OSGIN2Q9Y236 505 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 TRIM49BA6NDI0 452 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 BECN2A8MW95 431 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 F5H423 210 aaPredicted RBP9.09□□□□□ -0.95
SSBP1-212ENST00000489378 PLEKP08567 350 aaPredicted RBP9.09□□□□□ -0.95
SSBP1-212ENST00000489378 FGF5P12034 268 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 PTGER4P35408 488 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 FLT3P36888 993 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 RGRP47804 291 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 EPHA4P54764 986 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 KRTAP10-9P60411 292 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 FKBP3Q00688 224 aaKnown RBP9.09□□□□□ -0.95
SSBP1-212ENST00000489378 BNIPLQ7Z465 357 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 DNAAF5Q86Y56 855 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 TMEM151AQ8N4L1 468 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 ST6GALNAC3Q8NDV1 305 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 ADAMTS17Q8TE56 1095 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 SEC14L1Q92503 715 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 INPP5DQ92835 1189 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 NUS1Q96E22 293 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 SCARF2Q96GP6 870 aaPredicted RBP9.09□□□□□ -0.95
SSBP1-212ENST00000489378 SMAD5Q99717 465 aaKnown RBP9.09□□□□□ -0.95
SSBP1-212ENST00000489378 GPR87Q9BY21 358 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 TRIM8Q9BZR9 551 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 SYNCQ9H7C4 482 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 SARS2Q9NP81 518 aaKnown RBP9.09□□□□□ -0.95
SSBP1-212ENST00000489378 GPR83Q9NYM4 423 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 OGFRQ9NZT2 677 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 COPG2Q9UBF2 871 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 OR12D3Q9UGF7 316 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 USP25Q9UHP3 1055 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 B3GNT3Q9Y2A9 372 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 TMEM98Q9Y2Y6 226 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 COPG1Q9Y678 874 aaKnown RBP9.09□□□□□ -0.95
SSBP1-212ENST00000489378 ACANP16112 2415 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 PIKFYVEQ9Y2I7 2098 aa9.09□□□□□ -0.95
SSBP1-212ENST00000489378 FER1L5A0AVI2 2057 aa9.08□□□□□ -0.96
SSBP1-212ENST00000489378 CNTRLQ7Z7A1 2325 aa9.08□□□□□ -0.96
SSBP1-212ENST00000489378 SSU72P8A0A1W2PR75 194 aa9.08□□□□□ -0.96
SSBP1-212ENST00000489378 FAM170AA1A519 330 aa9.08□□□□□ -0.96
SSBP1-212ENST00000489378 RASA4BC9J798 803 aa9.08□□□□□ -0.96
SSBP1-212ENST00000489378 RASA4O43374 803 aa9.08□□□□□ -0.96
SSBP1-212ENST00000489378 TMEM63AO94886 807 aa9.08□□□□□ -0.96
SSBP1-212ENST00000489378 LRIG2O94898 1065 aa9.08□□□□□ -0.96
SSBP1-212ENST00000489378 C9P02748 559 aa9.08□□□□□ -0.96
SSBP1-212ENST00000489378 MT-ND3P03897 115 aa9.08□□□□□ -0.96
SSBP1-212ENST00000489378 PRCPP42785 496 aa9.08□□□□□ -0.96
SSBP1-212ENST00000489378 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.08□□□□□ -0.96
SSBP1-212ENST00000489378 PYCR3Q53H96 274 aa9.08□□□□□ -0.96
SSBP1-212ENST00000489378 MIIPQ5JXC2 388 aa9.08□□□□□ -0.96
SSBP1-212ENST00000489378 FAM69BQ5VUD6 431 aa9.08□□□□□ -0.96
SSBP1-212ENST00000489378 GJB7Q6PEY0 223 aa9.08□□□□□ -0.96
SSBP1-212ENST00000489378 MARK2Q7KZI7 788 aaKnown RBP9.08□□□□□ -0.96
SSBP1-212ENST00000489378 PLXDC1Q8IUK5 500 aa9.08□□□□□ -0.96
SSBP1-212ENST00000489378 ZNF295-AS1Q8N0V1 137 aa9.08□□□□□ -0.96
SSBP1-212ENST00000489378 SVOPQ8N4V2 548 aa9.08□□□□□ -0.96
SSBP1-212ENST00000489378 CFAP57Q96MR6 1250 aa9.08□□□□□ -0.96
SSBP1-212ENST00000489378 TGM7Q96PF1 710 aa9.08□□□□□ -0.96
SSBP1-212ENST00000489378 UBE2TQ9NPD8 197 aaPredicted RBP9.08□□□□□ -0.96
SSBP1-212ENST00000489378 PLCB1Q9NQ66 1216 aa9.08□□□□□ -0.96
SSBP1-212ENST00000489378 HPSEQ9Y251 543 aa9.08□□□□□ -0.96
SSBP1-212ENST00000489378 PCYT1BQ9Y5K3 369 aaPredicted RBP9.08□□□□□ -0.96
SSBP1-212ENST00000489378 GOLGA6CA6NDK9 693 aa9.07□□□□□ -0.96
SSBP1-212ENST00000489378 GOLGA6BA6NDN3 693 aa9.07□□□□□ -0.96
SSBP1-212ENST00000489378 E2F3O00716 465 aa9.07□□□□□ -0.96
SSBP1-212ENST00000489378 KIF1CO43896 1103 aaKnown RBP9.07□□□□□ -0.96
SSBP1-212ENST00000489378 GOLGA6DP0CG33 693 aa9.07□□□□□ -0.96
SSBP1-212ENST00000489378 TYRP1P17643 537 aa9.07□□□□□ -0.96
SSBP1-212ENST00000489378 LPOP22079 712 aaPredicted RBP9.07□□□□□ -0.96
SSBP1-212ENST00000489378 USP8P40818 1118 aa9.07□□□□□ -0.96
SSBP1-212ENST00000489378 ETV3P41162 512 aa9.07□□□□□ -0.96
SSBP1-212ENST00000489378 RNF144AP50876 292 aaPredicted RBP9.07□□□□□ -0.96
SSBP1-212ENST00000489378 RPS15P62841 145 aaKnown RBP9.07□□□□□ -0.96
SSBP1-212ENST00000489378 NRG1Q02297 640 aaPredicted RBP9.07□□□□□ -0.96
SSBP1-212ENST00000489378 GRM3Q14832 879 aa9.07□□□□□ -0.96
SSBP1-212ENST00000489378 CNGA3Q16281 694 aa9.07□□□□□ -0.96
SSBP1-212ENST00000489378 DENND2CQ68D51 928 aa9.07□□□□□ -0.96
SSBP1-212ENST00000489378 RAET1GQ6H3X3 334 aa9.07□□□□□ -0.96
SSBP1-212ENST00000489378 PWWP2BQ6NUJ5 590 aa9.07□□□□□ -0.96
SSBP1-212ENST00000489378 IYDQ6PHW0 289 aa9.07□□□□□ -0.96
SSBP1-212ENST00000489378 TRIM74Q86UV6 250 aa9.07□□□□□ -0.96
SSBP1-212ENST00000489378 FJX1Q86VR8 437 aa9.07□□□□□ -0.96
SSBP1-212ENST00000489378 PPP1R3BQ86XI6 285 aa9.07□□□□□ -0.96
SSBP1-212ENST00000489378 CBARPQ8N350 705 aaPredicted RBP9.07□□□□□ -0.96
SSBP1-212ENST00000489378 GLIS1Q8NBF1 620 aa9.07□□□□□ -0.96
SSBP1-212ENST00000489378 SH3KBP1Q96B97 665 aa9.07□□□□□ -0.96
SSBP1-212ENST00000489378 ECHDC3Q96DC8 303 aa9.07□□□□□ -0.96
SSBP1-212ENST00000489378 TUBGCP5Q96RT8 1024 aa9.07□□□□□ -0.96
SSBP1-212ENST00000489378 TSG101Q99816 390 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms