RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 PLK5Q496M5 336 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 ATP13A5Q4VNC0 1218 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 PDPK2PQ6A1A2 396 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 ZNF470Q6ECI4 717 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 RALGAPA1Q6GYQ0 2036 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 PSAPL1Q6NUJ1 521 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 PNCKQ6P2M8 343 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 GCNT7Q6ZNI0 430 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 C3orf62Q6ZUJ4 267 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 TRMT10CQ7L0Y3 403 aaKnown RBP12.24□□□□□ -0.45
TRAIP-209ENST00000488860 SNX20Q7Z614 316 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 HEATR4Q86WZ0 1026 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 RELL1Q8IUW5 271 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 ZBTB44Q8NCP5 570 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 ZNF398Q8TD17 642 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 FBF1Q8TES7 1133 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 ASB12Q8WXK4 309 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 NELL1Q92832 810 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 LENG8Q96PV6 779 aaPredicted RBP12.24□□□□□ -0.45
TRAIP-209ENST00000488860 KLF6Q99612 283 aaPredicted RBP12.24□□□□□ -0.45
TRAIP-209ENST00000488860 FAM167BQ9BTA0 163 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 DUSP15Q9H1R2 295 aaPredicted RBP12.24□□□□□ -0.45
TRAIP-209ENST00000488860 WDR26Q9H7D7 661 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 UGT1A7Q9HAW7 530 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 UGT1A10Q9HAW8 530 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 UGT1A8Q9HAW9 530 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 ARFGAP3Q9NP61 516 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 SLC17A6Q9P2U8 582 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 DMTF1Q9Y222 760 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 OR1A2Q9Y585 309 aa12.24□□□□□ -0.45
TRAIP-209ENST00000488860 ZFC3H1O60293 1989 aaKnown RBP12.23□□□□□ -0.45
TRAIP-209ENST00000488860 WDFY4Q6ZS81 3184 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 TCRBV9S1A1TA0A576 114 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 A6NNZ2 444 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 CD3EAPO15446 510 aaKnown RBP12.23□□□□□ -0.45
TRAIP-209ENST00000488860 RIPK2O43353 540 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 SOD1P00441 154 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 F7P08709 466 aaPredicted RBP12.23□□□□□ -0.45
TRAIP-209ENST00000488860 PSMA3P25788 255 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 AKT1P31749 480 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 CA5AP35218 305 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 SLC1A2P43004 574 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 ARCN1P48444 511 aaKnown RBP12.23□□□□□ -0.45
TRAIP-209ENST00000488860 PTPN5P54829 565 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 MGAT5Q09328 741 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 SEMA3AQ14563 771 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 INPP5AQ14642 412 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 STAT4Q14765 748 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 EFTUD2Q15029 972 aaKnown RBP eCLIP12.23□□□□□ -0.45
TRAIP-209ENST00000488860 BRD3Q15059 726 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 HSP90AA5PQ58FG0 334 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 WDR45BQ5MNZ6 344 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 ZC3H14Q6PJT7 736 aaKnown RBP12.23□□□□□ -0.45
TRAIP-209ENST00000488860 DOK6Q6PKX4 331 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 LAYNQ6UX15 382 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 LDB1Q86U70 411 aaPredicted RBP12.23□□□□□ -0.45
TRAIP-209ENST00000488860 TRIM74Q86UV6 250 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 PHYKPLQ8IUZ5 450 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 PNPLA1Q8N8W4 532 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 CAVIN3Q969G5 261 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 CENPTQ96BT3 561 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 ULK4Q96C45 1275 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 C19orf43Q9BQ61 176 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 TXLNGYQ9BZA5 131 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 ZFATQ9P243 1243 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 MARCH4Q9P2E8 410 aaPredicted RBP12.23□□□□□ -0.45
TRAIP-209ENST00000488860 SLCO1B1Q9Y6L6 691 aa12.23□□□□□ -0.45
TRAIP-209ENST00000488860 TDRD6O60522 2096 aaKnown RBP12.23□□□□□ -0.45
TRAIP-209ENST00000488860 A0A087WUV0 522 aaPredicted RBP12.22□□□□□ -0.45
TRAIP-209ENST00000488860 CCDC151A5D8V7 595 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 POM121BA6NF01 834 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 C10orf142B7Z368 130 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 LILRB5O75023 590 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 MTX2O75431 263 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 PIAS1O75925 651 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 SLC25A14O95258 325 aaPredicted RBP12.22□□□□□ -0.45
TRAIP-209ENST00000488860 PYGLP06737 847 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 ITPKAP23677 461 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 ACRV1P26436 265 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 PMLP29590 882 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 MPP1Q00013 466 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 CDK3Q00526 305 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 DBN1Q16643 649 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 AARS2Q5JTZ9 985 aaKnown RBP12.22□□□□□ -0.45
TRAIP-209ENST00000488860 ZNF648Q5T619 568 aaPredicted RBP12.22□□□□□ -0.45
TRAIP-209ENST00000488860 MRNIPQ6NTE8 343 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 NEPROQ6NW34 567 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 ADAMTSL4Q6UY14 1074 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 KYAT3Q6YP21 454 aaKnown RBP12.22□□□□□ -0.45
TRAIP-209ENST00000488860 SERPINA9Q86WD7 417 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 DENND6AQ8IWF6 608 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 CTAGE3PQ8IX95 158 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 PIANPQ8IYJ0 282 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 NXPE1Q8N323 547 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 TMEM145Q8NBT3 493 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 PRSS33Q8NF86 280 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 GABPB2Q8TAK5 448 aaPredicted RBP12.22□□□□□ -0.45
TRAIP-209ENST00000488860 CALML6Q8TD86 181 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 CDKL2Q92772 493 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 GLYATL1Q969I3 302 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms