RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 TOR4AQ9NXH8 423 aa18.51■□□□□ 0.55
PTCD3-217ENST00000488801 SPASTQ9UBP0 616 aa18.51■□□□□ 0.55
PTCD3-217ENST00000488801 LY6G6EA0A0G2JKS1 128 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 MROH6A6NGR9 719 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 C2orf81A6NN90 581 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 LMO7DNF2Z398 122 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 H7C0S8 307 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 TPP1O14773 563 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 INPP4BO15327 924 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 BUD23O43709 281 aaKnown RBP18.5■□□□□ 0.55
PTCD3-217ENST00000488801 DNAJC6O75061 913 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 CRTAMO95727 393 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 KRT14P02533 472 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 CELA2BP08218 269 aaPredicted RBP18.5■□□□□ 0.55
PTCD3-217ENST00000488801 CA5AP35218 305 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 XIAPP98170 497 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 CDK16Q00536 496 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 PROX2Q3B8N5 592 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 ATP13A5Q4VNC0 1218 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 PRRT3Q5FWE3 981 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 SYT10Q6XYQ8 523 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 HID1Q8IV36 788 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 SDR16C5Q8N3Y7 309 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 OR4K2Q8NGD2 314 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 OR13C4Q8NGS5 318 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 RHBDD1Q8TEB9 315 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 GRK7Q8WTQ7 553 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 SETD7Q8WTS6 366 aaKnown RBP18.5■□□□□ 0.55
PTCD3-217ENST00000488801 GLYATL1Q969I3 302 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 RANBP9Q96S59 729 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 SLC13A1Q9BZW2 595 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 PIH1D1Q9NWS0 290 aaKnown RBP18.5■□□□□ 0.55
PTCD3-217ENST00000488801 RIMKLBQ9ULI2 386 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 PKP3Q9Y446 797 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 PCYT1BQ9Y5K3 369 aaPredicted RBP18.5■□□□□ 0.55
PTCD3-217ENST00000488801 U3KQA8 63 aa18.5■□□□□ 0.55
PTCD3-217ENST00000488801 GLYATL1P3A0A0U1RQE8 302 aa18.49■□□□□ 0.55
PTCD3-217ENST00000488801 STX7O15400 261 aaKnown RBP18.49■□□□□ 0.55
PTCD3-217ENST00000488801 PTGIRP43119 386 aa18.49■□□□□ 0.55
PTCD3-217ENST00000488801 BASP1P80723 227 aaKnown RBP18.49■□□□□ 0.55
PTCD3-217ENST00000488801 PEX6Q13608 980 aa18.49■□□□□ 0.55
PTCD3-217ENST00000488801 TRIP13Q15645 432 aaPredicted RBP18.49■□□□□ 0.55
PTCD3-217ENST00000488801 PPM1JQ5JR12 505 aa18.49■□□□□ 0.55
PTCD3-217ENST00000488801 DGLUCYQ7Z3D6 616 aa18.49■□□□□ 0.55
PTCD3-217ENST00000488801 EID2Q8N6I1 236 aa18.49■□□□□ 0.55
PTCD3-217ENST00000488801 FAM181AQ8N9Y4 354 aa18.49■□□□□ 0.55
PTCD3-217ENST00000488801 CDC6Q99741 560 aa18.49■□□□□ 0.55
PTCD3-217ENST00000488801 BOCQ9BWV1 1114 aa18.49■□□□□ 0.55
PTCD3-217ENST00000488801 CYP4F12Q9HCS2 524 aa18.49■□□□□ 0.55
PTCD3-217ENST00000488801 NLE1Q9NVX2 485 aaPredicted RBP18.49■□□□□ 0.55
PTCD3-217ENST00000488801 TRNAU1APQ9NX07 287 aaKnown RBP18.49■□□□□ 0.55
PTCD3-217ENST00000488801 SUFUQ9UMX1 484 aa18.49■□□□□ 0.55
PTCD3-217ENST00000488801 ST14Q9Y5Y6 855 aa18.49■□□□□ 0.55
PTCD3-217ENST00000488801 TCRBV7S3A2A0A539 114 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 NEMP2A6NFY4 417 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 E7EVH7 732 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 CCDC188H7C350 402 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 GPR39O43194 453 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 SIGLEC6O43699 453 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 TMEM63AO94886 807 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 ECEL1O95672 775 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 GAS8O95995 478 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 TNFP01375 233 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 TPH1P17752 444 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 POLD2P49005 469 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 ACVR1Q04771 509 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 GPS1Q13098 491 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 PTK6Q13882 451 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 POU6F1Q14863 301 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 TRIP6Q15654 476 aaKnown RBP18.48■□□□□ 0.55
PTCD3-217ENST00000488801 CHRNA6Q15825 494 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 KIF26BQ2KJY2 2108 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 KHDC1Q4VXA5 237 aaKnown RBP18.48■□□□□ 0.55
PTCD3-217ENST00000488801 PYCR3Q53H96 274 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 FAM151BQ6UXP7 276 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 DDHD1Q8NEL9 900 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 GPBAR1Q8TDU6 330 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 LMX1AQ8TE12 382 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 CPT1BQ92523 772 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 DNAJC1Q96KC8 554 aaKnown RBP18.48■□□□□ 0.55
PTCD3-217ENST00000488801 DUSP23Q9BVJ7 150 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 TMEM168Q9H0V1 697 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 FTSJ1Q9UET6 329 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 FKBPLQ9UIM3 349 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 TMEM98Q9Y2Y6 226 aa18.48■□□□□ 0.55
PTCD3-217ENST00000488801 TRBV5-4A0A0C4DH59 114 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 GPR89AB7ZAQ6 455 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 CHUKO15111 745 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 FFAR2O15552 330 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 PRAMEF1O95521 474 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 GPR89BP0CG08 455 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 CASQ1P31415 396 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 HADHAP40939 763 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 C1orf61Q13536 156 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 ITGA9Q13797 1035 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 ELOCQ15369 112 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 C6orf132Q5T0Z8 1188 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 CERCAMQ5T4B2 595 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 ANKRD22Q5VYY1 191 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 DOK6Q6PKX4 331 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms