RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 IGHV5-10-1A0A0J9YXX1 117 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 GPR89AB7ZAQ6 455 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 C9orf172C9J069 976 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 INPP4BO15327 924 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 PRAMEF10O60809 474 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 DNAJC6O75061 913 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 ASMTLO95671 621 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 GPR89BP0CG08 455 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 LIMK2P53671 638 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 DCDC1P59894 354 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 AP1B1Q10567 949 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 ZBTB17Q13105 803 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 C16orf72Q14CZ0 275 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 KIF26BQ2KJY2 2108 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 ODF2Q5BJF6 829 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 ZNF574Q6ZN55 896 aaPredicted RBP12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 USP53Q70EK8 1073 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 MARK2Q7KZI7 788 aaKnown RBP12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 BZW1Q7L1Q6 419 aaKnown RBP12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 NT5DC3Q86UY8 548 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 CNGA4Q8IV77 575 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 RHOT1Q8IXI2 618 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 LRRN4Q8WUT4 740 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 PATE1Q8WXA2 126 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 USP7Q93009 1102 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 TADA1Q96BN2 335 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 IMP4Q96G21 291 aaKnown RBP12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 TRIB3Q96RU7 358 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 SRPK1Q96SB4 655 aaKnown RBP12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 NUDT22Q9BRQ3 303 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 CARD9Q9H257 536 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 ZFYVE1Q9HBF4 777 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 MAGEE1Q9HCI5 957 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 RAD18Q9NS91 495 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 SPTLC3Q9NUV7 552 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 KCNK4Q9NYG8 393 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 PCDHB11Q9Y5F2 797 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 PCDHGA3Q9Y5H0 932 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 UNC13CQ8NB66 2214 aa12.96□□□□□ -0.34
ATPAF2-207ENST00000488753 SHROOM3Q8TF72 1996 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 FADS2P1A8MWK0 482 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 EFSO43281 561 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 KRT1P04264 644 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 THRAP10827 490 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 SLC2A4P14672 509 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 ETV5P41161 510 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 PDPK2PQ6A1A2 396 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 TMEM71Q6P5X7 295 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 XKR5Q6UX68 686 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 TMC3Q7Z5M5 1100 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 DTX1Q86Y01 620 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 AVL9Q8NBF6 648 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 AGBL5Q8NDL9 886 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 CCDC112Q8NEF3 446 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 OR10G6Q8NH81 332 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 SLC37A2Q8TED4 501 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 SH3KBP1Q96B97 665 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 CCDC74BQ96LY2 380 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 HERPUD2Q9BSE4 406 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 ZSCAN5AQ9BUG6 496 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 SLC25A51Q9H1U9 297 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 TSPY26PQ9H489 355 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 STN1Q9H668 368 aaKnown RBP12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 SARS2Q9NP81 518 aaKnown RBP12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 FOXJ2Q9P0K8 574 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 PDP2Q9P2J9 529 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 ZNHIT2Q9UHR6 403 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 PLEKHM1Q9Y4G2 1056 aa12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 OAS3Q9Y6K5 1087 aaKnown RBP12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 ARHGEF17Q96PE2 2063 aaPredicted RBP12.95□□□□□ -0.34
ATPAF2-207ENST00000488753 A6NCN8 305 aa12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 DUX1O43812 170 aa12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 NUAK1O60285 661 aa12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 ATP1A1P05023 1023 aaKnown RBP12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 CSF2RBP32927 897 aa12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 NR2C2P49116 596 aa12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 CLCNKAP51800 687 aa12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 MAPK10P53779 464 aa12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 HADHBP55084 474 aaKnown RBP12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 HHEXQ03014 270 aa12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 CDK18Q07002 472 aa12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 TFDP2Q14188 446 aa12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 GALNT3Q14435 633 aa12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 TGIF1Q15583 401 aa12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 TAZQ16635 292 aa12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 TEX44Q53QW1 395 aa12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 IYDQ6PHW0 289 aa12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 CHST15Q7LFX5 561 aaPredicted RBP12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 LYSMD3Q7Z3D4 306 aa12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 ZNF605Q86T29 641 aa12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 RFX6Q8HWS3 928 aa12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 EID2BQ96D98 161 aa12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 AGAP3Q96P47 875 aa12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 TAAR9Q96RI9 348 aa12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 SLC38A3Q99624 504 aa12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 DDA1Q9BW61 102 aa12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 EPB41L1Q9H4G0 881 aa12.94□□□□□ -0.34
ATPAF2-207ENST00000488753 HELZ2Q9BYK8 2649 aaKnown RBP12.93□□□□□ -0.34
ATPAF2-207ENST00000488753 CFAP46Q8IYW2 2715 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms