RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 FGF1P05230 155 aa17.61■□□□□ 0.41
ITGB1-215ENST00000488494 PTPN7P35236 360 aa17.61■□□□□ 0.41
ITGB1-215ENST00000488494 LSSP48449 732 aa17.61■□□□□ 0.41
ITGB1-215ENST00000488494 RWDD2BP57060 319 aa17.61■□□□□ 0.41
ITGB1-215ENST00000488494 PYCR3Q53H96 274 aa17.61■□□□□ 0.41
ITGB1-215ENST00000488494 CCDC70Q6NSX1 233 aa17.61■□□□□ 0.41
ITGB1-215ENST00000488494 GPR26Q8NDV2 337 aa17.61■□□□□ 0.41
ITGB1-215ENST00000488494 PATE1Q8WXA2 126 aa17.61■□□□□ 0.41
ITGB1-215ENST00000488494 GRAMD1AQ96CP6 724 aa17.61■□□□□ 0.41
ITGB1-215ENST00000488494 OXNAD1Q96HP4 312 aaPredicted RBP17.61■□□□□ 0.41
ITGB1-215ENST00000488494 VAT1Q99536 393 aa17.61■□□□□ 0.41
ITGB1-215ENST00000488494 FAM118BQ9BPY3 351 aa17.61■□□□□ 0.41
ITGB1-215ENST00000488494 SPATA16Q9BXB7 569 aa17.61■□□□□ 0.41
ITGB1-215ENST00000488494 OSBPL8Q9BZF1 889 aa17.61■□□□□ 0.41
ITGB1-215ENST00000488494 FOXP3Q9BZS1 431 aa17.61■□□□□ 0.41
ITGB1-215ENST00000488494 LRRN3Q9H3W5 708 aa17.61■□□□□ 0.41
ITGB1-215ENST00000488494 VPS18Q9P253 973 aa17.61■□□□□ 0.41
ITGB1-215ENST00000488494 APPL1Q9UKG1 709 aa17.61■□□□□ 0.41
ITGB1-215ENST00000488494 PRKAB1Q9Y478 270 aa17.61■□□□□ 0.41
ITGB1-215ENST00000488494 PCYT1BQ9Y5K3 369 aaPredicted RBP17.61■□□□□ 0.41
ITGB1-215ENST00000488494 KNTC1P50748 2209 aa17.61■□□□□ 0.41
ITGB1-215ENST00000488494 SCN8AQ9UQD0 1980 aa17.6■□□□□ 0.41
ITGB1-215ENST00000488494 NUDT21O43809 227 aaKnown RBP17.6■□□□□ 0.41
ITGB1-215ENST00000488494 DXOO77932 396 aaKnown RBP17.6■□□□□ 0.41
ITGB1-215ENST00000488494 ECEL1O95672 775 aa17.6■□□□□ 0.41
ITGB1-215ENST00000488494 RBL1P28749 1068 aa17.6■□□□□ 0.41
ITGB1-215ENST00000488494 EIF2S3P41091 472 aaKnown RBP17.6■□□□□ 0.41
ITGB1-215ENST00000488494 CHRNA4P43681 627 aa17.6■□□□□ 0.41
ITGB1-215ENST00000488494 TNNT3P45378 269 aaPredicted RBP17.6■□□□□ 0.41
ITGB1-215ENST00000488494 OTUD4Q01804 1114 aaKnown RBP17.6■□□□□ 0.41
ITGB1-215ENST00000488494 XRCC4Q13426 336 aa17.6■□□□□ 0.41
ITGB1-215ENST00000488494 LRP8Q14114 963 aa17.6■□□□□ 0.41
ITGB1-215ENST00000488494 AADACL2Q6P093 401 aa17.6■□□□□ 0.41
ITGB1-215ENST00000488494 FOXR1Q6PIV2 292 aa17.6■□□□□ 0.41
ITGB1-215ENST00000488494 PID1Q7Z2X4 250 aa17.6■□□□□ 0.41
ITGB1-215ENST00000488494 TMC3Q7Z5M5 1100 aa17.6■□□□□ 0.41
ITGB1-215ENST00000488494 CDKL3Q8IVW4 592 aaPredicted RBP17.6■□□□□ 0.41
ITGB1-215ENST00000488494 IPMKQ8NFU5 416 aa17.6■□□□□ 0.41
ITGB1-215ENST00000488494 ACTL9Q8TC94 416 aa17.6■□□□□ 0.41
ITGB1-215ENST00000488494 FGF11Q92914 225 aa17.6■□□□□ 0.41
ITGB1-215ENST00000488494 FCRL5Q96RD9 977 aa17.6■□□□□ 0.41
ITGB1-215ENST00000488494 GBA3Q9H227 469 aa17.6■□□□□ 0.41
ITGB1-215ENST00000488494 EPB41L5Q9HCM4 733 aa17.6■□□□□ 0.41
ITGB1-215ENST00000488494 ASCL3Q9NQ33 180 aa17.6■□□□□ 0.41
ITGB1-215ENST00000488494 RAD18Q9NS91 495 aa17.6■□□□□ 0.41
ITGB1-215ENST00000488494 NFKBIL1Q9UBC1 381 aaPredicted RBP17.6■□□□□ 0.41
ITGB1-215ENST00000488494 ZNHIT2Q9UHR6 403 aa17.6■□□□□ 0.41
ITGB1-215ENST00000488494 ATXN7L1Q9ULK2 861 aaPredicted RBP17.6■□□□□ 0.41
ITGB1-215ENST00000488494 LOC400499M0QZD8 3231 aa17.6■□□□□ 0.41
ITGB1-215ENST00000488494 CCDC187A0A096LP49 1063 aa17.59■□□□□ 0.41
ITGB1-215ENST00000488494 RHPN2P1A8MT19 583 aa17.59■□□□□ 0.41
ITGB1-215ENST00000488494 AURKAO14965 403 aa17.59■□□□□ 0.41
ITGB1-215ENST00000488494 DNAJC6O75061 913 aa17.59■□□□□ 0.41
ITGB1-215ENST00000488494 PNLIPP16233 465 aa17.59■□□□□ 0.41
ITGB1-215ENST00000488494 BPIP17213 487 aa17.59■□□□□ 0.41
ITGB1-215ENST00000488494 ABCG1P45844 678 aa17.59■□□□□ 0.41
ITGB1-215ENST00000488494 KIF5AQ12840 1032 aa17.59■□□□□ 0.41
ITGB1-215ENST00000488494 PEX6Q13608 980 aa17.59■□□□□ 0.41
ITGB1-215ENST00000488494 MAP9Q49MG5 647 aa17.59■□□□□ 0.41
ITGB1-215ENST00000488494 SIRPB2Q5JXA9 342 aa17.59■□□□□ 0.41
ITGB1-215ENST00000488494 PEX26Q7Z412 305 aa17.59■□□□□ 0.41
ITGB1-215ENST00000488494 ZNF438Q7Z4V0 828 aa17.59■□□□□ 0.41
ITGB1-215ENST00000488494 C17orf82Q86X59 251 aaPredicted RBP17.59■□□□□ 0.41
ITGB1-215ENST00000488494 LSMEM2Q8N112 164 aa17.59■□□□□ 0.41
ITGB1-215ENST00000488494 NAGSQ8N159 534 aa17.59■□□□□ 0.41
ITGB1-215ENST00000488494 TXLNBQ8N3L3 684 aa17.59■□□□□ 0.41
ITGB1-215ENST00000488494 SLC25A41Q8N5S1 370 aa17.59■□□□□ 0.41
ITGB1-215ENST00000488494 MRGPRX2Q96LB1 330 aa17.59■□□□□ 0.41
ITGB1-215ENST00000488494 ZSCAN5AQ9BUG6 496 aa17.59■□□□□ 0.41
ITGB1-215ENST00000488494 FSD1LQ9BXM9 530 aa17.59■□□□□ 0.41
ITGB1-215ENST00000488494 ARFGAP3Q9NP61 516 aa17.59■□□□□ 0.41
ITGB1-215ENST00000488494 TRHDEQ9UKU6 1024 aa17.59■□□□□ 0.41
ITGB1-215ENST00000488494 PACSIN2Q9UNF0 486 aaPredicted RBP17.59■□□□□ 0.41
ITGB1-215ENST00000488494 EFR3BQ9Y2G0 817 aa17.59■□□□□ 0.41
ITGB1-215ENST00000488494 ADAMTS20P59510 1910 aa17.59■□□□□ 0.41
ITGB1-215ENST00000488494 LOC285095A0A1B0GVY8 99 aa17.58■□□□□ 0.4
ITGB1-215ENST00000488494 GOLGA6L6A8MZA4 724 aa17.58■□□□□ 0.4
ITGB1-215ENST00000488494 RRP8O43159 456 aaKnown RBP17.58■□□□□ 0.4
ITGB1-215ENST00000488494 FTCDO95954 541 aa17.58■□□□□ 0.4
ITGB1-215ENST00000488494 PYGMP11217 842 aa17.58■□□□□ 0.4
ITGB1-215ENST00000488494 ACP5P13686 325 aa17.58■□□□□ 0.4
ITGB1-215ENST00000488494 ITPKBP27987 946 aa17.58■□□□□ 0.4
ITGB1-215ENST00000488494 INHBCP55103 352 aa17.58■□□□□ 0.4
ITGB1-215ENST00000488494 PCBP4P57723 403 aaKnown RBP17.58■□□□□ 0.4
ITGB1-215ENST00000488494 EIF3EP60228 445 aaKnown RBP17.58■□□□□ 0.4
ITGB1-215ENST00000488494 CCDC173Q0VFZ6 552 aa17.58■□□□□ 0.4
ITGB1-215ENST00000488494 BIRC2Q13490 618 aa17.58■□□□□ 0.4
ITGB1-215ENST00000488494 ZNF648Q5T619 568 aaPredicted RBP17.58■□□□□ 0.4
ITGB1-215ENST00000488494 LRRC69Q6ZNQ3 347 aa17.58■□□□□ 0.4
ITGB1-215ENST00000488494 PHYKPLQ8IUZ5 450 aa17.58■□□□□ 0.4
ITGB1-215ENST00000488494 ARL14Q8N4G2 192 aa17.58■□□□□ 0.4
ITGB1-215ENST00000488494 TRAM1L1Q8N609 369 aa17.58■□□□□ 0.4
ITGB1-215ENST00000488494 LIN37Q96GY3 246 aaPredicted RBP17.58■□□□□ 0.4
ITGB1-215ENST00000488494 CRELD1Q96HD1 420 aa17.58■□□□□ 0.4
ITGB1-215ENST00000488494 ZNF578Q96N58 590 aaPredicted RBP17.58■□□□□ 0.4
ITGB1-215ENST00000488494 SRPK1Q96SB4 655 aaKnown RBP17.58■□□□□ 0.4
ITGB1-215ENST00000488494 OR2AG1Q9H205 316 aa17.58■□□□□ 0.4
ITGB1-215ENST00000488494 BPIFA1Q9NP55 256 aa17.58■□□□□ 0.4
ITGB1-215ENST00000488494 THSD1Q9NS62 852 aa17.58■□□□□ 0.4
ITGB1-215ENST00000488494 KCNK6Q9Y257 313 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms