RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 ATG9AQ7Z3C6 839 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 SDCCAG8Q86SQ7 713 aaPredicted RBP2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 TSPAN33Q86UF1 283 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 TMPRSS12Q86WS5 348 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 LINC00346Q8IVM7 164 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 CHERPQ8IWX8 916 aaKnown RBP2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 FBXL14Q8N1E6 418 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 PCDH20Q8N6Y1 951 aaKnown RBP2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 ZNF114Q8NC26 417 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 ACVR1CQ8NER5 493 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 OR8K5Q8NH50 307 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 DUSP19Q8WTR2 217 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 POMGNT1Q8WZA1 660 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 APBB2Q92870 758 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 ORAI1Q96D31 301 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 LMLNQ96KR4 655 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 NEUROD6Q96NK8 337 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 SEPT5Q99719 369 aaPredicted RBP2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 CMKLR1Q99788 373 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 KXD1Q9BQD3 176 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 IL25Q9H293 177 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 SMARCAD1Q9H4L7 1026 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 C17orf75Q9HAS0 396 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 HIF1ANQ9NWT6 349 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 NSMCE4AQ9NXX6 385 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 OGFRQ9NZT2 677 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 CWC15Q9P013 229 aaKnown RBP2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 SWAP70Q9UH65 585 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 PADI1Q9ULC6 663 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 TTC7AQ9ULT0 858 aaPredicted RBP2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 MTMR6Q9Y217 621 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 SNX9Q9Y5X1 595 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 CDRT15L2A8MXV6 281 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 M0QZ24 198 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 NTN3O00634 580 aaPredicted RBP2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 LINC01565O15544 149 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 HS6ST1O60243 411 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 KCNJ13O60928 360 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 ENTPD3O75355 529 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 CLDN14O95500 239 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 SRPRAP08240 638 aaKnown RBP2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 IGHV4-30-4P0DP06 118 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 SELLP14151 372 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 PON1P27169 355 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 TNFRSF8P28908 595 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 APOBEC1P41238 236 aaKnown RBP2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 SUOXP51687 545 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 CLNS1AP54105 237 aaKnown RBP2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 CHAF1BQ13112 559 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 MYBPHQ13203 477 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 PDE1CQ14123 709 aaPredicted RBP2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 DLG2Q15700 870 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 ADIPOQQ15848 244 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 PNLIPRP3Q17RR3 467 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 ZNF805Q5CZA5 627 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 RHBDF2Q6PJF5 856 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 NR2C2APQ86WQ0 139 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 RNF168Q8IYW5 571 aaPredicted RBP2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 ZNF34Q8IZ26 560 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 SCML4Q8N228 414 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 IL17RCQ8NAC3 791 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 SGCDQ92629 289 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 PHF21BQ96EK2 531 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 PGAM5Q96HS1 289 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 SMC6Q96SB8 1091 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 FIZ1Q96SL8 496 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 PDE7BQ9NP56 450 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 WSB2Q9NYS7 404 aaPredicted RBP2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 SUCLA2Q9P2R7 463 aaPredicted RBP2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 OR14J1Q9UGF5 321 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 KCNS2Q9ULS6 477 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 PTRH2Q9Y3E5 179 aaKnown RBP2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 TAF1P21675 1872 aa2.85□□□□□ -1.95
R3HDM1-219ENST00000488035 OR2A25A4D2G3 310 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 CTDSP2O14595 271 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 MID1O15344 667 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 OGG1O15527 345 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 PAPSS1O43252 624 aaPredicted RBP2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 BEST1O76090 585 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 GLUD1P00367 558 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 AKR1B1P15121 316 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 UBA1P22314 1058 aaKnown RBP2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 CORO1AP31146 461 aaKnown RBP2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 HOXC9P31274 260 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 RAD52P43351 418 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 SLC15A1P46059 708 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 GLUD2P49448 558 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 GPR143P51810 404 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 MFAP4P55083 255 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 CLDN20P56880 219 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 KRTAP10-12P60413 245 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 SEC61BP60468 96 aaKnown RBP2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 CSNK2A1P68400 391 aaPredicted RBP2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 MRPS34P82930 218 aaKnown RBP2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 ECT2LQ008S8 904 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 ZNF155Q12901 538 aaPredicted RBP2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 OASLQ15646 514 aaKnown RBP2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 CTF1Q16619 201 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 PCGF3Q3KNV8 242 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 ATP13A5Q4VNC0 1218 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms