RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 PTPN13Q12923 2485 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 B4E171 279 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 TERTO14746 1132 aaKnown RBP8.48□□□□□ -1.05
PRKCB-208ENST00000487674 DUX1O43812 170 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 PPFIA2O75334 1257 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 PDHA1P08559 390 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 SKILP12757 684 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 CA4P22748 312 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 CES1P23141 567 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 CSTF2P33240 577 aaKnown RBP eCLIP8.48□□□□□ -1.05
PRKCB-208ENST00000487674 TSPAN7P41732 249 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 ZNF165P49910 485 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 ARSDP51689 593 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 STC1P52823 247 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 EPHB1P54762 984 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 RAB15P59190 212 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 RPL26P61254 145 aaKnown RBP8.48□□□□□ -1.05
PRKCB-208ENST00000487674 CYP4F2P78329 520 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 ITKQ08881 620 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 NKAIN2Q5VXU1 208 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 HGSNATQ68CP4 663 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 TIGD7Q6NT04 549 aaPredicted RBP8.48□□□□□ -1.05
PRKCB-208ENST00000487674 TMEM71Q6P5X7 295 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 ATG14Q6ZNE5 492 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 RFLNAQ6ZTI6 216 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 MARK2Q7KZI7 788 aaKnown RBP8.48□□□□□ -1.05
PRKCB-208ENST00000487674 NRSN1Q8IZ57 195 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 SFRP1Q8N474 314 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 OR10G6Q8NH81 332 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 EXD1Q8NHP7 514 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 FAM71BQ8TC56 605 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 SLC37A2Q8TED4 501 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 JPH3Q8WXH2 748 aaPredicted RBP8.48□□□□□ -1.05
PRKCB-208ENST00000487674 MAML1Q92585 1016 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 HPS1Q92902 700 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 ART4Q93070 314 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 SCAMP4Q969E2 229 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 FATE1Q969F0 183 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 NKD1Q969G9 470 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 COX14Q96I36 57 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 SLC38A3Q99624 504 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 NUP85Q9BW27 656 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 SLC12A9Q9BXP2 914 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 TDRD1Q9BXT4 1180 aaKnown RBP8.48□□□□□ -1.05
PRKCB-208ENST00000487674 ASPSCR1Q9BZE9 553 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 TRIM4Q9C037 500 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 THAP2Q9H0W7 228 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 ADNPQ9H2P0 1102 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 TMEM9Q9P0T7 183 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 VPS18Q9P253 973 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 AMACRQ9UHK6 382 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 RPL26L1Q9UNX3 145 aaKnown RBP8.48□□□□□ -1.05
PRKCB-208ENST00000487674 TMEM98Q9Y2Y6 226 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 B3GALT1Q9Y5Z6 326 aa8.48□□□□□ -1.05
PRKCB-208ENST00000487674 BZW2Q9Y6E2 419 aaKnown RBP8.48□□□□□ -1.05
PRKCB-208ENST00000487674 UBR5O95071 2799 aaPredicted RBP8.47□□□□□ -1.05
PRKCB-208ENST00000487674 BOD1L1Q8NFC6 3051 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 A0A0U1RQS6 177 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 A0A1W2PQJ5 194 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 INPP4BO15327 924 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 SUV39H1O43463 412 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 MAP3K6O95382 1288 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 CYP1A2P05177 515 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 CD48P09326 243 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 LIFP15018 202 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 IL4RP24394 825 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 UGT1A3P35503 534 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 DSC2Q02487 901 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 HHEXQ03014 270 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 PTSQ03393 145 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 DPYSL3Q14195 570 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 CLCA4Q14CN2 919 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 PAFAH1B3Q15102 231 aaKnown RBP8.47□□□□□ -1.05
PRKCB-208ENST00000487674 HADHQ16836 314 aaKnown RBP8.47□□□□□ -1.05
PRKCB-208ENST00000487674 CCDC122Q5T0U0 273 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.47□□□□□ -1.05
PRKCB-208ENST00000487674 DCAF12Q5T6F0 453 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 NCBP2-AS2Q69YL0 99 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 BORAQ6PGQ7 559 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 WDR74Q6RFH5 385 aaPredicted RBP8.47□□□□□ -1.05
PRKCB-208ENST00000487674 FAM129CQ86XR2 697 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 CACNA2D3Q8IZS8 1091 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 IL22RA1Q8N6P7 574 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 BMPERQ8N8U9 685 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 SYN2Q92777 582 aaPredicted RBP8.47□□□□□ -1.05
PRKCB-208ENST00000487674 AHCYL2Q96HN2 611 aaKnown RBP8.47□□□□□ -1.05
PRKCB-208ENST00000487674 BTBD6Q96KE9 485 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 NAP1L5Q96NT1 182 aaPredicted RBP8.47□□□□□ -1.05
PRKCB-208ENST00000487674 TSGA13Q96PP4 275 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 TEFMQ96QE5 360 aaKnown RBP8.47□□□□□ -1.05
PRKCB-208ENST00000487674 SMIM14Q96QK8 99 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 LYSMD1Q96S90 227 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 AGAP2Q99490 1192 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 ZNF670Q9BS34 389 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 HERPUD2Q9BSE4 406 aa8.47□□□□□ -1.05
PRKCB-208ENST00000487674 RIOK2Q9BVS4 552 aaKnown RBP8.47□□□□□ -1.05
PRKCB-208ENST00000487674 STN1Q9H668 368 aaKnown RBP8.47□□□□□ -1.05
PRKCB-208ENST00000487674 SARS2Q9NP81 518 aaKnown RBP8.47□□□□□ -1.05
PRKCB-208ENST00000487674 GEMIN8Q9NWZ8 242 aaKnown RBP8.47□□□□□ -1.05
PRKCB-208ENST00000487674 SLC39A1Q9NY26 324 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms