RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 LPGAT1Q92604 370 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 MTFMTQ96DP5 389 aaKnown RBP11.76□□□□□ -0.53
TRA2B-214ENST00000487615 ZNF778Q96MU6 729 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 TSEN34Q9BSV6 310 aaKnown RBP11.76□□□□□ -0.53
TRA2B-214ENST00000487615 TBCDQ9BTW9 1192 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 FCF1Q9Y324 198 aaKnown RBP11.76□□□□□ -0.53
TRA2B-214ENST00000487615 M0QZQ0 153 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 ITGAXP20702 1163 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 PRMT2P55345 433 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 HERVK_113P63132 956 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 HERC3Q15034 1050 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 CPSF6Q16630 551 aaKnown RBP eCLIP11.76□□□□□ -0.53
TRA2B-214ENST00000487615 TPGS2Q68CL5 300 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 REP15Q6BDI9 236 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 TRMT11Q7Z4G4 463 aaKnown RBP11.76□□□□□ -0.53
TRA2B-214ENST00000487615 LRRTM3Q86VH5 581 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 CILP2Q8IUL8 1156 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 P3H2Q8IVL5 708 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 ERVK-6Q9BXR3 956 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 A0A1W2PQ45 241 aaPredicted RBP11.75□□□□□ -0.53
TRA2B-214ENST00000487615 A0A1W2PQY0 241 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 SLC28A1O00337 649 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 PIP5K1BO14986 540 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 CXCL14O95715 111 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 PEX2P28328 305 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 VPS26BQ4G0F5 336 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 FAM171BQ6P995 826 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 PAQR3Q6TCH7 311 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 DCBLD1Q8N8Z6 715 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 IMP4Q96G21 291 aaKnown RBP11.75□□□□□ -0.53
TRA2B-214ENST00000487615 MRGPRX2Q96LB1 330 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 NUDT4Q9NZJ9 180 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 TMEM233B4DJY2 109 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 PRAMEF11O60813 436 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 EPOP01588 193 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 PRKCGP05129 697 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 SP100P23497 879 aaPredicted RBP11.75□□□□□ -0.53
TRA2B-214ENST00000487615 AFF1P51825 1210 aaKnown RBP11.75□□□□□ -0.53
TRA2B-214ENST00000487615 TRIM32Q13049 653 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 SETMARQ53H47 684 aaPredicted RBP11.75□□□□□ -0.53
TRA2B-214ENST00000487615 ZDHHC13Q8IUH4 622 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 DTNBP1Q96EV8 351 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 RAD18Q9NS91 495 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 POLR3BQ9NW08 1133 aaPredicted RBP11.75□□□□□ -0.53
TRA2B-214ENST00000487615 SH3BP4Q9P0V3 963 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 ZNHIT2Q9UHR6 403 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 YIPF1Q9Y548 306 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 ZCWPW2A0A1B0GU75 182 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 GNRH1P01148 92 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 UROSP10746 265 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 HOXD8P13378 290 aaPredicted RBP11.75□□□□□ -0.53
TRA2B-214ENST00000487615 SPAM1P38567 509 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 SLC26A3P40879 764 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 TRIM25Q14258 630 aaKnown RBP11.75□□□□□ -0.53
TRA2B-214ENST00000487615 SYT12Q8IV01 421 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 ZNF276Q8N554 614 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 ARNTL2Q8WYA1 636 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 TRIM45Q9H8W5 580 aaPredicted RBP11.75□□□□□ -0.53
TRA2B-214ENST00000487615 HECAQ9UBI9 543 aaPredicted RBP11.75□□□□□ -0.53
TRA2B-214ENST00000487615 KCTD3Q9Y597 815 aa11.75□□□□□ -0.53
TRA2B-214ENST00000487615 DYTNA2CJ06 578 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 EFCAB14O75071 495 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 SNNO75324 88 aaPredicted RBP11.74□□□□□ -0.53
TRA2B-214ENST00000487615 SMNDC1O75940 238 aaKnown RBP eCLIP11.74□□□□□ -0.53
TRA2B-214ENST00000487615 PGM3O95394 542 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 GLUD1P00367 558 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 CD68P34810 354 aaPredicted RBP11.74□□□□□ -0.53
TRA2B-214ENST00000487615 RING1Q06587 406 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 RNF19BQ6ZMZ0 732 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 PAQR9Q6ZVX9 377 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 EID3Q8N140 333 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 AADATQ8N5Z0 425 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 COPG1Q9Y678 874 aaKnown RBP11.74□□□□□ -0.53
TRA2B-214ENST00000487615 QSOX1O00391 747 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 PEX1O43933 1283 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 OAZ2O95190 189 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 ITGB1P05556 798 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 PLEKHG4Q58EX7 1191 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 ATXN7L2Q5T6C5 722 aaPredicted RBP11.74□□□□□ -0.53
TRA2B-214ENST00000487615 PAOXQ6QHF9 649 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 PIM3Q86V86 326 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 ATL1Q8WXF7 558 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 KHSRPQ92945 711 aaKnown RBP eCLIP11.74□□□□□ -0.535e-7■■□□□ 13.4
TRA2B-214ENST00000487615 OSBPL11Q9BXB4 747 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 GRIP2Q9C0E4 1043 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 SIX3O95343 332 aaPredicted RBP11.74□□□□□ -0.53
TRA2B-214ENST00000487615 UGT2B4P06133 528 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 SLC35E2BP0CK96 405 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 CDC16Q13042 620 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 AP5B1Q2VPB7 878 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 PIK3R6Q5UE93 754 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 DNAJB7Q7Z6W7 309 aaPredicted RBP11.74□□□□□ -0.53
TRA2B-214ENST00000487615 SIDT2Q8NBJ9 832 aaKnown RBP11.74□□□□□ -0.53
TRA2B-214ENST00000487615 FAM156AQ8NDB6 213 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 FBXO30Q8TB52 745 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 CCDC106Q9BWC9 280 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 GPR62Q9BZJ7 368 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 NOL11Q9H8H0 719 aaKnown RBP11.74□□□□□ -0.53
TRA2B-214ENST00000487615 KCTD5Q9NXV2 234 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 POLR3HQ9Y535 204 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms