RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 CA4P22748 312 aa12.1□□□□□ -0.47
VPS16-208ENST00000487461 CD86P42081 329 aa12.1□□□□□ -0.47
VPS16-208ENST00000487461 SPINT3P49223 89 aa12.1□□□□□ -0.47
VPS16-208ENST00000487461 CYP4F2P78329 520 aa12.1□□□□□ -0.47
VPS16-208ENST00000487461 LRP8Q14114 963 aa12.1□□□□□ -0.47
VPS16-208ENST00000487461 ASTE1Q2TB18 679 aaPredicted RBP12.1□□□□□ -0.47
VPS16-208ENST00000487461 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.1□□□□□ -0.47
VPS16-208ENST00000487461 TMEM71Q6P5X7 295 aa12.1□□□□□ -0.47
VPS16-208ENST00000487461 RAVER1Q8IY67 606 aaKnown RBP12.1□□□□□ -0.47
VPS16-208ENST00000487461 SFRP1Q8N474 314 aa12.1□□□□□ -0.47
VPS16-208ENST00000487461 SLC37A2Q8TED4 501 aa12.1□□□□□ -0.47
VPS16-208ENST00000487461 JPH3Q8WXH2 748 aaPredicted RBP12.1□□□□□ -0.47
VPS16-208ENST00000487461 CTNNBL1Q8WYA6 563 aaPredicted RBP12.1□□□□□ -0.47
VPS16-208ENST00000487461 HDAC11Q96DB2 347 aa12.1□□□□□ -0.47
VPS16-208ENST00000487461 RNF157Q96PX1 679 aa12.1□□□□□ -0.47
VPS16-208ENST00000487461 MLPHQ9BV36 600 aaPredicted RBP12.1□□□□□ -0.47
VPS16-208ENST00000487461 FAM83DQ9H4H8 585 aa12.1□□□□□ -0.47
VPS16-208ENST00000487461 HAUS2Q9NVX0 235 aa12.1□□□□□ -0.47
VPS16-208ENST00000487461 OCIAD1Q9NX40 245 aa12.1□□□□□ -0.47
VPS16-208ENST00000487461 PDP2Q9P2J9 529 aa12.1□□□□□ -0.47
VPS16-208ENST00000487461 TBC1D29Q9UFV1 150 aa12.1□□□□□ -0.47
VPS16-208ENST00000487461 PCDHGA4Q9Y5G9 962 aa12.1□□□□□ -0.47
VPS16-208ENST00000487461 PCDHGA3Q9Y5H0 932 aa12.1□□□□□ -0.47
VPS16-208ENST00000487461 B3GALT1Q9Y5Z6 326 aa12.1□□□□□ -0.47
VPS16-208ENST00000487461 C1orf232A0A0U1RR37 186 aa12.09□□□□□ -0.47
VPS16-208ENST00000487461 STMND1H3BQB6 276 aa12.09□□□□□ -0.47
VPS16-208ENST00000487461 KCNK1O00180 336 aa12.09□□□□□ -0.47
VPS16-208ENST00000487461 ITGB2P05107 769 aa12.09□□□□□ -0.47
VPS16-208ENST00000487461 CSTF2P33240 577 aaKnown RBP eCLIP12.09□□□□□ -0.47
VPS16-208ENST00000487461 FASLGP48023 281 aa12.09□□□□□ -0.47
VPS16-208ENST00000487461 GPLD1P80108 840 aa12.09□□□□□ -0.47
VPS16-208ENST00000487461 PPIDQ08752 370 aaKnown RBP12.09□□□□□ -0.47
VPS16-208ENST00000487461 ZBTB17Q13105 803 aa12.09□□□□□ -0.47
VPS16-208ENST00000487461 MESDQ14696 234 aa12.09□□□□□ -0.47
VPS16-208ENST00000487461 SLC18A3Q16572 532 aa12.09□□□□□ -0.47
VPS16-208ENST00000487461 TBR1Q16650 682 aa12.09□□□□□ -0.47
VPS16-208ENST00000487461 HENMT1Q5T8I9 393 aaKnown RBP12.09□□□□□ -0.47
VPS16-208ENST00000487461 IYDQ6PHW0 289 aa12.09□□□□□ -0.47
VPS16-208ENST00000487461 XKR5Q6UX68 686 aa12.09□□□□□ -0.47
VPS16-208ENST00000487461 CHST15Q7LFX5 561 aaPredicted RBP12.09□□□□□ -0.47
VPS16-208ENST00000487461 PLD5Q8N7P1 536 aa12.09□□□□□ -0.47
VPS16-208ENST00000487461 AGBL5Q8NDL9 886 aa12.09□□□□□ -0.47
VPS16-208ENST00000487461 ART4Q93070 314 aa12.09□□□□□ -0.47
VPS16-208ENST00000487461 NKD1Q969G9 470 aa12.09□□□□□ -0.47
VPS16-208ENST00000487461 EID2BQ96D98 161 aa12.09□□□□□ -0.47
VPS16-208ENST00000487461 SLC38A3Q99624 504 aa12.09□□□□□ -0.47
VPS16-208ENST00000487461 DPYSL5Q9BPU6 564 aa12.09□□□□□ -0.47
VPS16-208ENST00000487461 XPO4Q9C0E2 1151 aaKnown RBP12.09□□□□□ -0.47
VPS16-208ENST00000487461 SLC39A1Q9NY26 324 aa12.09□□□□□ -0.47
VPS16-208ENST00000487461 VPS18Q9P253 973 aa12.09□□□□□ -0.47
VPS16-208ENST00000487461 KCNK6Q9Y257 313 aa12.09□□□□□ -0.47
VPS16-208ENST00000487461 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.09□□□□□ -0.47
VPS16-208ENST00000487461 RGSL1A5PLK6 1076 aa12.08□□□□□ -0.48
VPS16-208ENST00000487461 C3orf70A6NLC5 250 aaPredicted RBP12.08□□□□□ -0.48
VPS16-208ENST00000487461 EFCAB7A8K855 629 aa12.08□□□□□ -0.48
VPS16-208ENST00000487461 ITGB6P18564 788 aa12.08□□□□□ -0.48
VPS16-208ENST00000487461 MAN1A1P33908 653 aa12.08□□□□□ -0.48
VPS16-208ENST00000487461 IFI35P80217 286 aaPredicted RBP12.08□□□□□ -0.48
VPS16-208ENST00000487461 NFATC3Q12968 1075 aa12.08□□□□□ -0.48
VPS16-208ENST00000487461 NFATC2Q13469 925 aa12.08□□□□□ -0.48
VPS16-208ENST00000487461 ZFYVE27Q5T4F4 411 aa12.08□□□□□ -0.48
VPS16-208ENST00000487461 ZNF648Q5T619 568 aaPredicted RBP12.08□□□□□ -0.48
VPS16-208ENST00000487461 LYSMD3Q7Z3D4 306 aa12.08□□□□□ -0.48
VPS16-208ENST00000487461 KDELC2Q7Z4H8 507 aa12.08□□□□□ -0.48
VPS16-208ENST00000487461 ZSCAN1Q8NBB4 408 aa12.08□□□□□ -0.48
VPS16-208ENST00000487461 SLC35G2Q8TBE7 412 aa12.08□□□□□ -0.48
VPS16-208ENST00000487461 CCHCR1Q8TD31 782 aa12.08□□□□□ -0.48
VPS16-208ENST00000487461 HTR3CQ8WXA8 447 aa12.08□□□□□ -0.48
VPS16-208ENST00000487461 AHCYL2Q96HN2 611 aaKnown RBP12.08□□□□□ -0.48
VPS16-208ENST00000487461 TRIB3Q96RU7 358 aa12.08□□□□□ -0.48
VPS16-208ENST00000487461 ARHGAP9Q9BRR9 750 aa12.08□□□□□ -0.48
VPS16-208ENST00000487461 SLC12A9Q9BXP2 914 aa12.08□□□□□ -0.48
VPS16-208ENST00000487461 CEP41Q9BYV8 373 aa12.08□□□□□ -0.48
VPS16-208ENST00000487461 RMI1Q9H9A7 625 aa12.08□□□□□ -0.48
VPS16-208ENST00000487461 ARFGAP3Q9NP61 516 aa12.08□□□□□ -0.48
VPS16-208ENST00000487461 PKD2L2Q9NZM6 624 aa12.08□□□□□ -0.48
VPS16-208ENST00000487461 ATXN10Q9UBB4 475 aa12.08□□□□□ -0.48
VPS16-208ENST00000487461 LCMT1Q9UIC8 334 aa12.08□□□□□ -0.48
VPS16-208ENST00000487461 HEY1Q9Y5J3 304 aa12.08□□□□□ -0.48
VPS16-208ENST00000487461 SDK2Q58EX2 2172 aa12.08□□□□□ -0.48
VPS16-208ENST00000487461 LRRD1A4D1F6 860 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 A6NCN8 305 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 A8MU76 341 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 B4E171 279 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 GRID2O43424 1007 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 SLC28A2O43868 658 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 NUAK1O60285 661 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 SNX2O60749 519 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 TMEM253P0C7T8 217 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 FAM87AP0C7U9 286 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 ACP5P13686 325 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 ZNF8P17098 575 aaPredicted RBP12.07□□□□□ -0.48
VPS16-208ENST00000487461 UGT1A3P35503 534 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 TSPAN7P41732 249 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 HHEXQ03014 270 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 AP1B1Q10567 949 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 GALNT3Q14435 633 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 SNAP47Q5SQN1 464 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 ANKS6Q68DC2 871 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 SLC9A4Q6AI14 798 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms