RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 GPC4O75487 556 aa3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 CAMTA2O94983 1202 aa3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 G6PDP11413 515 aa3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 FGF3P11487 239 aaPredicted RBP3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 SELLP14151 372 aa3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 UBA1P22314 1058 aaKnown RBP3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 ACADLP28330 430 aa3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 HOXD3P31249 432 aaPredicted RBP3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 EIF2S3P41091 472 aaKnown RBP3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 NRIP1P48552 1158 aa3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 AMTP48728 403 aa3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 PSMC6P62333 389 aa3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 MRPS5P82675 430 aaKnown RBP3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 EFNB3Q15768 340 aa3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 NTRK2Q16620 822 aa3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 PNLIPRP3Q17RR3 467 aa3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 EIF2S3LQ2VIR3 472 aaKnown RBP3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 TYW3Q6IPR3 259 aaKnown RBP3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 TMCO3Q6UWJ1 677 aa3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 B3GNT6Q6ZMB0 384 aa3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 RBM23Q86U06 439 aaKnown RBP3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 PRPF39Q86UA1 669 aaKnown RBP3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 ZC3HC1Q86WB0 502 aaKnown RBP3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 SPATA2LQ8IUW3 424 aaPredicted RBP3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 SLF1Q9BQI6 1058 aa3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 HAUS8Q9BT25 410 aa3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 DCLK3Q9C098 648 aa3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 KCNN2Q9H2S1 579 aa3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 MMP25Q9NPA2 562 aa3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 CNGB3Q9NQW8 809 aa3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 GIMAP4Q9NUV9 329 aa3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 HIF1ANQ9NWT6 349 aa3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 MRPL15Q9P015 296 aaKnown RBP3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 UBA2Q9UBT2 640 aaPredicted RBP3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 SEC63Q9UGP8 760 aaKnown RBP3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 TTC7AQ9ULT0 858 aaPredicted RBP3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 PTGDR2Q9Y5Y4 395 aa3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 CLIC4Q9Y696 253 aa3.55□□□□□ -1.84
SNRNP27-204ENST00000487029 SCN5AQ14524 2016 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 ZNF644Q9H582 1327 aaPredicted RBP3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 OR2A25A4D2G3 310 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 A8MV72 311 aaPredicted RBP3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 H3BQ06 376 aaPredicted RBP3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 MITFO75030 526 aaPredicted RBP3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 ERAL1O75616 437 aaKnown RBP3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 CH25HO95992 272 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 TUBBP07437 444 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 ANXA7P20073 488 aaKnown RBP3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 CDC25AP30304 524 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 STX2P32856 288 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 KCNJ4P48050 445 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 MXI1P50539 228 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 PGGT1BP53609 377 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 CALD1Q05682 793 aaKnown RBP3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 GRIK2Q13002 908 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 KEAP1Q14145 624 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 PCLAFQ15004 111 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 RARS2Q5T160 578 aaKnown RBP3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 GPR139Q6DWJ6 353 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 TAOK1Q7L7X3 1001 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 EPHX4Q8IUS5 362 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 SCML4Q8N228 414 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 TMTC2Q8N394 836 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 PRR26Q8N8Z3 221 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 IL17RCQ8NAC3 791 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 OR8K5Q8NH50 307 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 TRPC4APQ8TEL6 797 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 OIT3Q8WWZ8 545 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 SLC22A18Q96BI1 424 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 TXNDC15Q96J42 360 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 EGLN2Q96KS0 407 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 GAD1Q99259 594 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 SF3B5Q9BWJ5 86 aaKnown RBP3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 HRH4Q9H3N8 390 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 MAGIXQ9H6Y5 334 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 C17orf75Q9HAS0 396 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 ACSS1Q9NUB1 689 aaPredicted RBP3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 MTMR10Q9NXD2 777 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 COPG2Q9UBF2 871 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 MORF4L1Q9UBU8 362 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 SLC9A2Q9UBY0 812 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 OR14J1Q9UGF5 321 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 AGO1Q9UL18 857 aaKnown RBP3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 EXO1Q9UQ84 846 aaKnown RBP3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 RPS6KL1Q9Y6S9 549 aa3.54□□□□□ -1.84
SNRNP27-204ENST00000487029 ATXN2Q99700 1313 aaKnown RBP3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 KANSL1LA0AUZ9 987 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 SYNDIG1LA6NDD5 238 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 LRRC72A6NJI9 287 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 SH2B2O14492 632 aaPredicted RBP3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 ACOT8O14734 319 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 TCERG1O14776 1098 aaKnown RBP3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 PAPSS1O43252 624 aaPredicted RBP3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 NDUFS7O75251 213 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 EGFP01133 1207 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 ADRB2P07550 413 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 IL11P20809 199 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 C21orf33P30042 268 aaPredicted RBP3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 HSD17B4P51659 736 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 GPR143P51810 404 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms