RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 LMLNQ96KR4 655 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 CATSPER2Q96P56 530 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 MTIF3Q9H2K0 278 aaKnown RBP20.24■□□□□ 0.83
HPS3-206ENST00000486530 RNF112Q9ULX5 631 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 A0A088AWK7 358 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 SYCE1LA8MT33 242 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 H0Y3Z8 333 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 OR1I1O60431 355 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 SKAP2O75563 359 aaPredicted RBP20.24■□□□□ 0.83
HPS3-206ENST00000486530 PRAMEF12O95522 483 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 GNAZP19086 355 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 ITGAXP20702 1163 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 SERPINA4P29622 427 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 CCNG1P51959 295 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 UBE3AQ05086 875 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 CERS6Q6ZMG9 384 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 TAS2R42Q7RTR8 314 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 PAF1Q8N7H5 531 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 OR2AP1Q8NGE2 309 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 EID2BQ96D98 161 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 ZFYVE1Q9HBF4 777 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 C15orf41Q9Y2V0 281 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 FIS1Q9Y3D6 152 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 TRAF6Q9Y4K3 522 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 A0A0U1RQS6 177 aa20.23■□□□□ 0.83
HPS3-206ENST00000486530 NIPSNAP2O75323 286 aa20.23■□□□□ 0.83
HPS3-206ENST00000486530 ZNF821O75541 412 aaPredicted RBP20.23■□□□□ 0.83
HPS3-206ENST00000486530 PSMG1O95456 288 aa20.23■□□□□ 0.83
HPS3-206ENST00000486530 GFAPP14136 432 aa20.23■□□□□ 0.83
HPS3-206ENST00000486530 PFKFB4Q16877 469 aa20.23■□□□□ 0.83
HPS3-206ENST00000486530 ARHGAP15Q53QZ3 475 aa20.23■□□□□ 0.83
HPS3-206ENST00000486530 TMEM198Q66K66 360 aa20.23■□□□□ 0.83
HPS3-206ENST00000486530 UGT3A1Q6NUS8 523 aa20.23■□□□□ 0.83
HPS3-206ENST00000486530 LBHD1Q9BQE6 289 aaPredicted RBP20.23■□□□□ 0.83
HPS3-206ENST00000486530 ZBTB26Q9HCK0 441 aa20.23■□□□□ 0.83
HPS3-206ENST00000486530 TNFRSF12AQ9NP84 129 aa20.23■□□□□ 0.83
HPS3-206ENST00000486530 CCL26Q9Y258 94 aa20.23■□□□□ 0.83
HPS3-206ENST00000486530 PCDHB1Q9Y5F3 818 aa20.23■□□□□ 0.83
HPS3-206ENST00000486530 CAPN8A6NHC0 703 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 CCDC85CA6NKD9 419 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 GOLGA8CPA6NN73 597 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 SUPT3HB4E1H0 165 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 UBFD1O14562 309 aaKnown RBP20.22■□□□□ 0.83
HPS3-206ENST00000486530 GRM6O15303 877 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 SUPT3HO75486 399 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 PTPN2P17706 415 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 IRS1P35568 1242 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 SNRPD1P62314 119 aaKnown RBP20.22■□□□□ 0.83
HPS3-206ENST00000486530 RIPOR1Q6ZS17 1223 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 SNX32Q86XE0 403 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 PELI3Q8N2H9 469 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 CD200R1Q8TD46 325 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 MICAL1Q8TDZ2 1067 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 ISG20Q96AZ6 181 aaKnown RBP20.22■□□□□ 0.83
HPS3-206ENST00000486530 P2RY12Q9H244 342 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 TNKS2Q9H2K2 1166 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 G3BP2Q9UN86 482 aaKnown RBP20.22■□□□□ 0.83
HPS3-206ENST00000486530 HS3ST2Q9Y278 367 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 COPG1Q9Y678 874 aaKnown RBP20.22■□□□□ 0.83
HPS3-206ENST00000486530 MYOFQ9NZM1 2061 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 C1orf232A0A0U1RR37 186 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 GRXCR1A8MXD5 290 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 E5RI56 91 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 CCNT2O60583 730 aaKnown RBP20.22■□□□□ 0.83
HPS3-206ENST00000486530 SRCP12931 536 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 HLA-FP30511 346 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 ACTR3P61158 418 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 NAA20P61599 178 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 CYLC2Q14093 348 aaPredicted RBP20.22■□□□□ 0.83
HPS3-206ENST00000486530 RCN1Q15293 331 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 TEAD2Q15562 447 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 ACCSLQ4AC99 568 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 DGKKQ5KSL6 1271 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 COL13A1Q5TAT6 717 aaPredicted RBP20.22■□□□□ 0.83
HPS3-206ENST00000486530 C1orf146Q5VVC0 180 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 DEFB107AQ8IZN7 70 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 FBXO39Q8N4B4 442 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 SIDT2Q8NBJ9 832 aaKnown RBP20.22■□□□□ 0.83
HPS3-206ENST00000486530 GRIN3AQ8TCU5 1115 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 TCEAL4Q96EI5 215 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 ABHD8Q96I13 439 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 PANX3Q96QZ0 392 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 TMCO1Q9UM00 188 aa20.22■□□□□ 0.83
HPS3-206ENST00000486530 SOBPA7XYQ1 873 aa20.21■□□□□ 0.83
HPS3-206ENST00000486530 PRMT5O14744 637 aaPredicted RBP20.21■□□□□ 0.83
HPS3-206ENST00000486530 KRT36O76013 467 aa20.21■□□□□ 0.83
HPS3-206ENST00000486530 PRAMEF1O95521 474 aa20.21■□□□□ 0.83
HPS3-206ENST00000486530 RB1P06400 928 aa20.21■□□□□ 0.83
HPS3-206ENST00000486530 CHRM3P20309 590 aa20.21■□□□□ 0.83
HPS3-206ENST00000486530 IL2P60568 153 aa20.21■□□□□ 0.83
HPS3-206ENST00000486530 TSNQ15631 228 aaKnown RBP20.21■□□□□ 0.83
HPS3-206ENST00000486530 C22orf39Q6P5X5 142 aa20.21■□□□□ 0.83
HPS3-206ENST00000486530 CHSY3Q70JA7 882 aa20.21■□□□□ 0.83
HPS3-206ENST00000486530 ZNF557Q8N988 423 aaPredicted RBP20.21■□□□□ 0.83
HPS3-206ENST00000486530 ANKRD27Q96NW4 1050 aa20.21■□□□□ 0.83
HPS3-206ENST00000486530 TUBGCP5Q96RT8 1024 aa20.21■□□□□ 0.83
HPS3-206ENST00000486530 TTC1Q99614 292 aa20.21■□□□□ 0.83
HPS3-206ENST00000486530 SLC30A3Q99726 388 aa20.21■□□□□ 0.83
HPS3-206ENST00000486530 GALPQ9UBC7 116 aa20.21■□□□□ 0.83
HPS3-206ENST00000486530 STOML1Q9UBI4 398 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms