RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 TEX264Q9Y6I9 313 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 ANTXRLA6NF34 631 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 IGLON5A6NGN9 336 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 MROH6A6NGR9 719 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 SHISA7A6NL88 538 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 E5RI56 91 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 POC1B-GALNT4F8VUJ3 575 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 CACNB4O00305 520 aaPredicted RBP6.92□□□□□ -1.3
UBR4-214ENST00000486515 QSOX1O00391 747 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 AREL1O15033 823 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 SLC31A1O15431 190 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 CD3EAPO15446 510 aaKnown RBP6.92□□□□□ -1.3
UBR4-214ENST00000486515 RIPK2O43353 540 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 LDB2O43679 373 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 MAGEC1O60732 1142 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 BANF1O75531 89 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 SRP72O76094 671 aaKnown RBP6.92□□□□□ -1.3
UBR4-214ENST00000486515 RHOBTB1O94844 696 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 SLC25A14O95258 325 aaPredicted RBP6.92□□□□□ -1.3
UBR4-214ENST00000486515 PAK4O96013 591 aaPredicted RBP6.92□□□□□ -1.3
UBR4-214ENST00000486515 GOT2P00505 430 aaKnown RBP6.92□□□□□ -1.3
UBR4-214ENST00000486515 PCCBP05166 539 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 ABHD2P08910 425 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 FAM153BP0C7A2 387 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 GNSP15586 552 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 ZNF7P17097 686 aaPredicted RBP6.92□□□□□ -1.3
UBR4-214ENST00000486515 HNRNPA2B1P22626 353 aaKnown RBP6.92□□□□□ -1.3
UBR4-214ENST00000486515 NMBRP28336 390 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 SSTR1P30872 391 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 MAT2AP31153 395 aaKnown RBP6.92□□□□□ -1.3
UBR4-214ENST00000486515 HOXA6P31267 233 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 CNR2P34972 360 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 HSD17B3P37058 310 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 ETV3P41162 512 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 DPP6P42658 865 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 PXNP49023 591 aaPredicted RBP6.92□□□□□ -1.3
UBR4-214ENST00000486515 STC1P52823 247 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 DCDC1P59894 354 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 SEMG2Q02383 582 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 FZD5Q13467 585 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 PTK2BQ14289 1009 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 SLC29A2Q14542 456 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 FAM153CQ494X1 144 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 MSS51Q4VC12 460 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 HSP90B2PQ58FF3 399 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 LDLRAP1Q5SW96 308 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 KIAA0895LQ68EN5 471 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 NEPROQ6NW34 567 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 ESRP1Q6NXG1 681 aaKnown RBP6.92□□□□□ -1.3
UBR4-214ENST00000486515 CES3Q6UWW8 571 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 FAM151BQ6UXP7 276 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 UNC5AQ6ZN44 842 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 Q6ZVL8 140 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 CYS1Q717R9 158 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 ZNF534Q76KX8 674 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 ZNF765Q7L2R6 523 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 CYP2U1Q7Z449 544 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 SNX20Q7Z614 316 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 TSPAN33Q86UF1 283 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 TRIM69Q86WT6 500 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 LRRC6Q86X45 466 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 ZNF687Q8N1G0 1237 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 MPP5Q8N3R9 675 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 TRAM1L1Q8N609 369 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 CADM4Q8NFZ8 388 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 UHMK1Q8TAS1 419 aaKnown RBP6.92□□□□□ -1.3
UBR4-214ENST00000486515 FAM174AQ8TBP5 190 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 ZNF398Q8TD17 642 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 FBF1Q8TES7 1133 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 AENQ8WTP8 325 aaKnown RBP6.92□□□□□ -1.3
UBR4-214ENST00000486515 SCG3Q8WXD2 468 aaKnown RBP6.92□□□□□ -1.3
UBR4-214ENST00000486515 RLN3Q8WXF3 142 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 CDKN2AIPNLQ96HQ2 116 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 VPS39Q96JC1 886 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 DNAJC1Q96KC8 554 aaKnown RBP6.92□□□□□ -1.3
UBR4-214ENST00000486515 TBATAQ96M53 351 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 TSNARE1Q96NA8 513 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 TCF12Q99081 682 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 COPS8Q99627 209 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 SLC17A9Q9BYT1 436 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 CLPBQ9H078 707 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 CENPHQ9H3R5 247 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 AASDHPPTQ9NRN7 309 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 PHPT1Q9NRX4 125 aaPredicted RBP6.92□□□□□ -1.3
UBR4-214ENST00000486515 IARS2Q9NSE4 1012 aaKnown RBP6.92□□□□□ -1.3
UBR4-214ENST00000486515 WSB2Q9NYS7 404 aaPredicted RBP6.92□□□□□ -1.3
UBR4-214ENST00000486515 NINJ2Q9NZG7 142 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 IL17CQ9P0M4 197 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 CD84Q9UIB8 345 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 FKBPLQ9UIM3 349 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 GMEB2Q9UKD1 530 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 DMTF1Q9Y222 760 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 ITM2BQ9Y287 266 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 SPO11Q9Y5K1 396 aa6.92□□□□□ -1.3
UBR4-214ENST00000486515 SPTAN1Q13813 2472 aaKnown RBP6.91□□□□□ -1.3
UBR4-214ENST00000486515 LAMA5O15230 3695 aa6.91□□□□□ -1.3
UBR4-214ENST00000486515 IQANK1A0A1B0GTG1 560 aa6.91□□□□□ -1.3
UBR4-214ENST00000486515 UBA6A0AVT1 1052 aaPredicted RBP6.91□□□□□ -1.3
UBR4-214ENST00000486515 TLDC2A0PJX2 215 aa6.91□□□□□ -1.3
UBR4-214ENST00000486515 PABPN1LA6NDY0 278 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms