RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 DFNA5O60443 496 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 GFRA3O60609 400 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 SRP72O76094 671 aaKnown RBP11.31□□□□□ -0.6
NUP50-216ENST00000486184 SLU7O95391 586 aaKnown RBP11.31□□□□□ -0.6
NUP50-216ENST00000486184 POLBP06746 335 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 HOXC4P09017 264 aaPredicted RBP11.31□□□□□ -0.6
NUP50-216ENST00000486184 ENGP17813 658 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 TRIM23P36406 574 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 DRG2P55039 364 aaKnown RBP11.31□□□□□ -0.6
NUP50-216ENST00000486184 TUBB4BP68371 445 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 IRX4P78413 519 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 DHX9Q08211 1270 aaKnown RBP11.31□□□□□ -0.6
NUP50-216ENST00000486184 PDIA2Q13087 525 aaKnown RBP11.31□□□□□ -0.6
NUP50-216ENST00000486184 GTF2H3Q13889 308 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 HLTFQ14527 1009 aaKnown RBP eCLIP11.31□□□□□ -0.6
NUP50-216ENST00000486184 CHRNA6Q15825 494 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 KIF19Q2TAC6 998 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 TCEAL6Q6IPX3 200 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 DOK6Q6PKX4 331 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 AFTPHQ6ULP2 937 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 ENPP7Q6UWV6 458 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 KDM7AQ6ZMT4 941 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 CEP128Q6ZU80 1094 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 TAS2R42Q7RTR8 314 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 ASCL5Q7RTU5 278 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 SNX20Q7Z614 316 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 PARGQ86W56 976 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 CCNJLQ8IV13 435 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 IFT20Q8IY31 132 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 MPP5Q8N3R9 675 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 OR56A4Q8NGH8 313 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 GABPB2Q8TAK5 448 aaPredicted RBP11.31□□□□□ -0.6
NUP50-216ENST00000486184 ZNF398Q8TD17 642 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 DTX3LQ8TDB6 740 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 IFT81Q8WYA0 676 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 ART4Q93070 314 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 TCEAL3Q969E4 200 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 GLYATL1Q969I3 302 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 FUBP1Q96AE4 644 aaKnown RBP11.31□□□□□ -0.6
NUP50-216ENST00000486184 ZNF669Q96BR6 464 aaPredicted RBP11.31□□□□□ -0.6
NUP50-216ENST00000486184 ULK4Q96C45 1275 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 LRRC39Q96DD0 335 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 CDKN2AIPNLQ96HQ2 116 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 TTC25Q96NG3 672 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 VPS35Q96QK1 796 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 AGAP2Q99490 1192 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 TTC1Q99614 292 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 NAT9Q9BTE0 207 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 KIFC1Q9BW19 673 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 TEX101Q9BY14 249 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 FAM129AQ9BZQ8 928 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 ZCCHC2Q9C0B9 1178 aaKnown RBP11.31□□□□□ -0.6
NUP50-216ENST00000486184 DNAJC28Q9NX36 388 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 GRHL1Q9NZI5 618 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 SNX11Q9Y5W9 270 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 WDFY4Q6ZS81 3184 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 FAM237BA0A1B0GVD1 139 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 H7C0S8 307 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 YKT6O15498 198 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 SOD1P00441 154 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 RALBP11234 206 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 PGAM1P18669 254 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 NMBRP28336 390 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 AKT1P31749 480 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 PPARGP37231 505 aaPredicted RBP11.3□□□□□ -0.6
NUP50-216ENST00000486184 CTSKP43235 329 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 MAGEA3P43357 314 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 BLKP51451 505 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 PPARDQ03181 441 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 CACNG1Q06432 222 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 NFATC2Q13469 925 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 SF3A2Q15428 464 aaKnown RBP11.3□□□□□ -0.6
NUP50-216ENST00000486184 GPR33Q49SQ1 333 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 ATP13A5Q4VNC0 1218 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 FASTKD1Q53R41 847 aaKnown RBP11.3□□□□□ -0.6
NUP50-216ENST00000486184 AARS2Q5JTZ9 985 aaKnown RBP11.3□□□□□ -0.6
NUP50-216ENST00000486184 LDLRAP1Q5SW96 308 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 FNBP1LQ5T0N5 605 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 PRR23CQ6ZRP0 262 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 RD3Q7Z3Z2 195 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 TRIM74Q86UV6 250 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 CCDC25Q86WR0 208 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 SLC22A18ASQ8N1D0 253 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 PELI3Q8N2H9 469 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 DCLK2Q8N568 766 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 OR13J1Q8NGT2 312 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 BTN2A2Q8WVV5 523 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 HDAC10Q969S8 669 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 FAM122AQ96E09 287 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 DCUN1D1Q96GG9 259 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 TBATAQ96M53 351 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 EDEM2Q9BV94 578 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 FOXP3Q9BZS1 431 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 SLC13A1Q9BZW2 595 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 GAREM1Q9H706 876 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 ERVMER34-1Q9H9K5 563 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 FSCN3Q9NQT6 498 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 SLC2A6Q9UGQ3 507 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 ZC3H7BQ9UGR2 993 aaKnown RBP11.3□□□□□ -0.6
NUP50-216ENST00000486184 DMGDHQ9UI17 866 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms