RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 CCDC66A2RUB6 948 aa17.52■□□□□ 0.4
COL6A1-204ENST00000486023 PMS2P1A4D2B8 440 aa17.52■□□□□ 0.4
COL6A1-204ENST00000486023 GOLGA6L6A8MZA4 724 aa17.52■□□□□ 0.4
COL6A1-204ENST00000486023 APOC4-APOC2K7ER74 178 aa17.52■□□□□ 0.4
COL6A1-204ENST00000486023 RRP8O43159 456 aaKnown RBP17.52■□□□□ 0.4
COL6A1-204ENST00000486023 TCEA3O75764 348 aa17.52■□□□□ 0.4
COL6A1-204ENST00000486023 SLC25A14O95258 325 aaPredicted RBP17.52■□□□□ 0.4
COL6A1-204ENST00000486023 FTCDO95954 541 aa17.52■□□□□ 0.4
COL6A1-204ENST00000486023 APOC2P02655 101 aa17.52■□□□□ 0.4
COL6A1-204ENST00000486023 PYGMP11217 842 aa17.52■□□□□ 0.4
COL6A1-204ENST00000486023 ITPKBP27987 946 aa17.52■□□□□ 0.4
COL6A1-204ENST00000486023 EIF2S3P41091 472 aaKnown RBP17.52■□□□□ 0.4
COL6A1-204ENST00000486023 CHRNA4P43681 627 aa17.52■□□□□ 0.4
COL6A1-204ENST00000486023 LSSP48449 732 aa17.52■□□□□ 0.4
COL6A1-204ENST00000486023 OR1D5P58170 312 aa17.52■□□□□ 0.4
COL6A1-204ENST00000486023 EIF3EP60228 445 aaKnown RBP17.52■□□□□ 0.4
COL6A1-204ENST00000486023 COPS2P61201 443 aa17.52■□□□□ 0.4
COL6A1-204ENST00000486023 HLTFQ14527 1009 aaKnown RBP eCLIP17.52■□□□□ 0.4
COL6A1-204ENST00000486023 PYCR3Q53H96 274 aa17.52■□□□□ 0.4
COL6A1-204ENST00000486023 HENMT1Q5T8I9 393 aaKnown RBP17.52■□□□□ 0.4
COL6A1-204ENST00000486023 DARS2Q6PI48 645 aaKnown RBP17.52■□□□□ 0.4
COL6A1-204ENST00000486023 TMC3Q7Z5M5 1100 aa17.52■□□□□ 0.4
COL6A1-204ENST00000486023 B3GNT8Q7Z7M8 397 aa17.52■□□□□ 0.4
COL6A1-204ENST00000486023 TMEM139Q8IV31 216 aa17.52■□□□□ 0.4
COL6A1-204ENST00000486023 ARL14Q8N4G2 192 aa17.52■□□□□ 0.4
COL6A1-204ENST00000486023 GPR26Q8NDV2 337 aa17.52■□□□□ 0.4
COL6A1-204ENST00000486023 ACTL9Q8TC94 416 aa17.52■□□□□ 0.4
COL6A1-204ENST00000486023 COX14Q96I36 57 aa17.52■□□□□ 0.4
COL6A1-204ENST00000486023 IMPACTQ9P2X3 320 aa17.52■□□□□ 0.4
COL6A1-204ENST00000486023 CNOT6Q9ULM6 557 aaKnown RBP17.52■□□□□ 0.4
COL6A1-204ENST00000486023 PCYT1BQ9Y5K3 369 aaPredicted RBP17.52■□□□□ 0.4
COL6A1-204ENST00000486023 RGSL1A5PLK6 1076 aa17.51■□□□□ 0.39
COL6A1-204ENST00000486023 BTNL10A8MVZ5 291 aa17.51■□□□□ 0.39
COL6A1-204ENST00000486023 HACD1B0YJ81 288 aa17.51■□□□□ 0.39
COL6A1-204ENST00000486023 PJA2O43164 708 aa17.51■□□□□ 0.39
COL6A1-204ENST00000486023 BUD23O43709 281 aaKnown RBP17.51■□□□□ 0.39
COL6A1-204ENST00000486023 SNX2O60749 519 aa17.51■□□□□ 0.39
COL6A1-204ENST00000486023 CDC25BP30305 580 aa17.51■□□□□ 0.39
COL6A1-204ENST00000486023 TBC1D25Q3MII6 688 aa17.51■□□□□ 0.39
COL6A1-204ENST00000486023 SIRPB2Q5JXA9 342 aa17.51■□□□□ 0.39
COL6A1-204ENST00000486023 USP53Q70EK8 1073 aa17.51■□□□□ 0.39
COL6A1-204ENST00000486023 BLOC1S5Q8TDH9 187 aa17.51■□□□□ 0.39
COL6A1-204ENST00000486023 ALG3Q92685 438 aa17.51■□□□□ 0.39
COL6A1-204ENST00000486023 TADA1Q96BN2 335 aa17.51■□□□□ 0.39
COL6A1-204ENST00000486023 CRELD1Q96HD1 420 aa17.51■□□□□ 0.39
COL6A1-204ENST00000486023 OXNAD1Q96HP4 312 aaPredicted RBP17.51■□□□□ 0.39
COL6A1-204ENST00000486023 VAT1Q99536 393 aa17.51■□□□□ 0.39
COL6A1-204ENST00000486023 FERMT1Q9BQL6 677 aa17.51■□□□□ 0.39
COL6A1-204ENST00000486023 OR2AG1Q9H205 316 aa17.51■□□□□ 0.39
COL6A1-204ENST00000486023 KCNK6Q9Y257 313 aa17.51■□□□□ 0.39
COL6A1-204ENST00000486023 ASXL3Q9C0F0 2248 aa17.51■□□□□ 0.39
COL6A1-204ENST00000486023 A0A1W2PNU3 283 aaPredicted RBP17.5■□□□□ 0.39
COL6A1-204ENST00000486023 NTN3O00634 580 aaPredicted RBP17.5■□□□□ 0.39
COL6A1-204ENST00000486023 KCNN4O15554 427 aa17.5■□□□□ 0.39
COL6A1-204ENST00000486023 TJP3O95049 919 aa17.5■□□□□ 0.39
COL6A1-204ENST00000486023 TNFSF15O95150 251 aa17.5■□□□□ 0.39
COL6A1-204ENST00000486023 ACP5P13686 325 aa17.5■□□□□ 0.39
COL6A1-204ENST00000486023 INHBCP55103 352 aa17.5■□□□□ 0.39
COL6A1-204ENST00000486023 XRCC4Q13426 336 aa17.5■□□□□ 0.39
COL6A1-204ENST00000486023 ZNF569Q5MCW4 686 aa17.5■□□□□ 0.39
COL6A1-204ENST00000486023 KDELC1Q6UW63 502 aa17.5■□□□□ 0.39
COL6A1-204ENST00000486023 SPRED1Q7Z699 444 aa17.5■□□□□ 0.39
COL6A1-204ENST00000486023 LSMEM2Q8N112 164 aa17.5■□□□□ 0.39
COL6A1-204ENST00000486023 NAGSQ8N159 534 aa17.5■□□□□ 0.39
COL6A1-204ENST00000486023 TXLNBQ8N3L3 684 aa17.5■□□□□ 0.39
COL6A1-204ENST00000486023 UBL4BQ8N7F7 174 aa17.5■□□□□ 0.39
COL6A1-204ENST00000486023 LRRC57Q8N9N7 239 aa17.5■□□□□ 0.39
COL6A1-204ENST00000486023 WDR36Q8NI36 951 aaKnown RBP17.5■□□□□ 0.39
COL6A1-204ENST00000486023 GDAP1Q8TB36 358 aa17.5■□□□□ 0.39
COL6A1-204ENST00000486023 MRGPRX2Q96LB1 330 aa17.5■□□□□ 0.39
COL6A1-204ENST00000486023 FCRL5Q96RD9 977 aa17.5■□□□□ 0.39
COL6A1-204ENST00000486023 STRADBQ9C0K7 418 aa17.5■□□□□ 0.39
COL6A1-204ENST00000486023 ZMYND15Q9H091 742 aa17.5■□□□□ 0.39
COL6A1-204ENST00000486023 RDH14Q9HBH5 336 aa17.5■□□□□ 0.39
COL6A1-204ENST00000486023 ATXN10Q9UBB4 475 aa17.5■□□□□ 0.39
COL6A1-204ENST00000486023 APPL1Q9UKG1 709 aa17.5■□□□□ 0.39
COL6A1-204ENST00000486023 TRHDEQ9UKU6 1024 aa17.5■□□□□ 0.39
COL6A1-204ENST00000486023 ACACAQ13085 2346 aa17.5■□□□□ 0.39
COL6A1-204ENST00000486023 URB1O60287 2271 aaKnown RBP17.5■□□□□ 0.39
COL6A1-204ENST00000486023 MYLKQ15746 1914 aa17.49■□□□□ 0.39
COL6A1-204ENST00000486023 ITPR1Q14643 2758 aa17.49■□□□□ 0.39
COL6A1-204ENST00000486023 D6RAR5 112 aa17.49■□□□□ 0.39
COL6A1-204ENST00000486023 B4GAT1O43505 415 aa17.49■□□□□ 0.39
COL6A1-204ENST00000486023 NUDT21O43809 227 aaKnown RBP17.49■□□□□ 0.39
COL6A1-204ENST00000486023 DNAJC6O75061 913 aa17.49■□□□□ 0.39
COL6A1-204ENST00000486023 MTX2O75431 263 aa17.49■□□□□ 0.39
COL6A1-204ENST00000486023 RBP3P10745 1247 aa17.49■□□□□ 0.39
COL6A1-204ENST00000486023 HGFP14210 728 aa17.49■□□□□ 0.39
COL6A1-204ENST00000486023 BPIP17213 487 aa17.49■□□□□ 0.39
COL6A1-204ENST00000486023 ABCG1P45844 678 aa17.49■□□□□ 0.39
COL6A1-204ENST00000486023 PDX1P52945 283 aa17.49■□□□□ 0.39
COL6A1-204ENST00000486023 PEX6Q13608 980 aa17.49■□□□□ 0.39
COL6A1-204ENST00000486023 PLA2G4EQ3MJ16 856 aa17.49■□□□□ 0.39
COL6A1-204ENST00000486023 MAP9Q49MG5 647 aa17.49■□□□□ 0.39
COL6A1-204ENST00000486023 PHF19Q5T6S3 580 aa17.49■□□□□ 0.39
COL6A1-204ENST00000486023 NKAIN2Q5VXU1 208 aa17.49■□□□□ 0.39
COL6A1-204ENST00000486023 CRTC3Q6UUV7 619 aa17.49■□□□□ 0.39
COL6A1-204ENST00000486023 ZNF761Q86XN6 746 aaPredicted RBP17.49■□□□□ 0.39
COL6A1-204ENST00000486023 CDKL3Q8IVW4 592 aaPredicted RBP17.49■□□□□ 0.39
COL6A1-204ENST00000486023 RAVER1Q8IY67 606 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms