RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 IRF2BP2Q7Z5L9 587 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 MAPKAPK5Q8IW41 473 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 CCDC117Q8IWD4 279 aaPredicted RBP4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 RNF152Q8N8N0 203 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 LRRC57Q8N9N7 239 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 TDRD5Q8NAT2 981 aaKnown RBP4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 POGLUT1Q8NBL1 392 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 OR6J1Q8NGC5 347 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 HUS1BQ8NHY5 278 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 STT3BQ8TCJ2 826 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 SCFD1Q8WVM8 642 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 ASB15Q8WXK1 588 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 EXTL1Q92935 676 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 ZKSCAN4Q969J2 545 aaPredicted RBP4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 HDAC10Q969S8 669 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 TRIM43Q96BQ3 446 aaPredicted RBP4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 C18orf8Q96DM3 657 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 KTI12Q96EK9 354 aaPredicted RBP4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 NEIL1Q96FI4 390 aaPredicted RBP4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 CAPZA3Q96KX2 299 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 PRICKLE1Q96MT3 831 aaPredicted RBP4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 DPYSL5Q9BPU6 564 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 TRIM62Q9BVG3 475 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 EIF2AQ9BY44 585 aaKnown RBP4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 FAM129AQ9BZQ8 928 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 ADNPQ9H2P0 1102 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 SEC61A2Q9H9S3 476 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 MLXIPQ9HAP2 919 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 TM7SF3Q9NS93 570 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 FAM207AQ9NSI2 230 aaPredicted RBP4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 RBM12Q9NTZ6 932 aaKnown RBP4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 PANK4Q9NVE7 773 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 RAB20Q9NX57 234 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 MOCS1Q9NZB8 636 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 EHD2Q9NZN4 543 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 C5AR2Q9P296 337 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 LCMT1Q9UIC8 334 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 MAGEL2Q9UJ55 1249 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 SNX6Q9UNH7 406 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 TFR2Q9UP52 801 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 LIPT1Q9Y234 373 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 TNFSF13BQ9Y275 285 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 CLDN16Q9Y5I7 305 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 PSAT1Q9Y617 370 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 CLCA3PQ9Y6N3 262 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 UBE4BO95155 1302 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 LY75O60449 1722 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 LTBP4Q8N2S1 1624 aa4.05□□□□□ -1.76
PRPF38B-205ENST00000485810 THSD7AQ9UPZ6 1657 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 DENND3A2RUS2 1198 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 A4D1N5 150 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 SLC9B1P1A6NJY1 282 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 ZNF233A6NK53 670 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 AQP12BA6NM10 295 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 H0Y8G0 127 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 H0YGN5 161 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 H3BNC9 293 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 EIF3DO15371 548 aaKnown RBP eCLIP4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 ADAM20O43506 726 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 CA12O43570 354 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 CACNG3O60359 315 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 FAM155BO75949 473 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 HEXIM1O94992 359 aaKnown RBP4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 SCAF4O95104 1147 aaKnown RBP4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 KLHL2O95198 593 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 ALPPP05187 535 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 FGF4P08620 206 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 CYP3A4P08684 503 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 PLA2G4BP0C869 781 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 GOLGA8HP0CJ92 632 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 TXNP10599 105 aaKnown RBP4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 ALPPL2P10696 532 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 KRT3P12035 628 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 MYL4P12829 197 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 KRT4P19013 534 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 AGXTP21549 392 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 PTBP1P26599 531 aaKnown RBP eCLIP4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 KLRC1P26715 233 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 RPA1P27694 616 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 CST5P28325 142 aaPredicted RBP4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 ECHS1P30084 290 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 CCR1P32246 355 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 LSP1P33241 339 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 GJA4P35212 333 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 PSMB10P40306 273 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 WNT5AP41221 380 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 CASP3P42574 277 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 ARHGDIBP52566 201 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 ACTR2P61160 394 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 FKBP1AP62942 108 aaKnown RBP4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 TRA2BP62995 288 aaKnown RBP4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 UBE2IP63279 158 aaKnown RBP4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 GFPT1Q06210 699 aaPredicted RBP4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 DRP2Q13474 957 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 GPM6BQ13491 265 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 THOC5Q13769 683 aaKnown RBP4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 TNFAIP1Q13829 316 aa4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 DDX39BQ13838 428 aaKnown RBP4.04□□□□□ -1.76
PRPF38B-205ENST00000485810 ZMYND11Q15326 602 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms