RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 HGSO14964 777 aaPredicted RBP13.16□□□□□ -0.3
UBA3-210ENST00000485424 CBFA2T2O43439 604 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 B4GAT1O43505 415 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 CLDN7O95471 211 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 HLA-DQB2P05538 268 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 FAM87AP0C7U9 286 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 SLC2A4P14672 509 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 ITGB6P18564 788 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 CSTF2P33240 577 aaKnown RBP eCLIP13.16□□□□□ -0.3
UBA3-210ENST00000485424 ATP1A2P50993 1020 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 RPL26P61254 145 aaKnown RBP13.16□□□□□ -0.3
UBA3-210ENST00000485424 NFKB2Q00653 900 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 TRA2AQ13595 282 aaKnown RBP eCLIP13.16□□□□□ -0.3
UBA3-210ENST00000485424 LRP8Q14114 963 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 MESDQ14696 234 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 SLC18A3Q16572 532 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 XKR5Q6UX68 686 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 CHST15Q7LFX5 561 aaPredicted RBP13.16□□□□□ -0.3
UBA3-210ENST00000485424 ZNF438Q7Z4V0 828 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 TRIM74Q86UV6 250 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 DTX1Q86Y01 620 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 NAGSQ8N159 534 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 CBARPQ8N350 705 aaPredicted RBP13.16□□□□□ -0.3
UBA3-210ENST00000485424 RCBTB1Q8NDN9 531 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 OR10G6Q8NH81 332 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 PATE1Q8WXA2 126 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 HTR3CQ8WXA8 447 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 FATE1Q969F0 183 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 RNF166Q96A37 237 aaPredicted RBP13.16□□□□□ -0.3
UBA3-210ENST00000485424 HDAC11Q96DB2 347 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 CCDC74BQ96LY2 380 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 TSGA13Q96PP4 275 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 NUDT22Q9BRQ3 303 aa13.16□□□□□ -0.3
UBA3-210ENST00000485424 MLPHQ9BV36 600 aaPredicted RBP13.16□□□□□ -0.3
UBA3-210ENST00000485424 RIOK2Q9BVS4 552 aaKnown RBP13.16□□□□□ -0.3
UBA3-210ENST00000485424 RPL26L1Q9UNX3 145 aaKnown RBP13.16□□□□□ -0.3
UBA3-210ENST00000485424 TRBV23OR9-2A0A075B6M9 112 aa13.15□□□□□ -0.3
UBA3-210ENST00000485424 LRRD1A4D1F6 860 aa13.15□□□□□ -0.3
UBA3-210ENST00000485424 STMND1H3BQB6 276 aa13.15□□□□□ -0.3
UBA3-210ENST00000485424 TERTO14746 1132 aaKnown RBP13.15□□□□□ -0.3
UBA3-210ENST00000485424 ARHGAP6O43182 974 aa13.15□□□□□ -0.3
UBA3-210ENST00000485424 DUX1O43812 170 aa13.15□□□□□ -0.3
UBA3-210ENST00000485424 FUCA1P04066 466 aa13.15□□□□□ -0.3
UBA3-210ENST00000485424 CD86P42081 329 aa13.15□□□□□ -0.3
UBA3-210ENST00000485424 CSRP3P50461 194 aa13.15□□□□□ -0.3
UBA3-210ENST00000485424 ARSEP51690 589 aa13.15□□□□□ -0.3
UBA3-210ENST00000485424 STC1P52823 247 aa13.15□□□□□ -0.3
UBA3-210ENST00000485424 GPLD1P80108 840 aa13.15□□□□□ -0.3
UBA3-210ENST00000485424 AP1B1Q10567 949 aa13.15□□□□□ -0.3
UBA3-210ENST00000485424 NR1D2Q14995 579 aa13.15□□□□□ -0.3
UBA3-210ENST00000485424 PYCR3Q53H96 274 aa13.15□□□□□ -0.3
UBA3-210ENST00000485424 ALG1LQ6GMV1 187 aa13.15□□□□□ -0.3
UBA3-210ENST00000485424 RFLNAQ6ZTI6 216 aa13.15□□□□□ -0.3
UBA3-210ENST00000485424 NLRP8Q86W28 1048 aa13.15□□□□□ -0.3
UBA3-210ENST00000485424 C17orf82Q86X59 251 aaPredicted RBP13.15□□□□□ -0.3
UBA3-210ENST00000485424 RAVER1Q8IY67 606 aaKnown RBP13.15□□□□□ -0.3
UBA3-210ENST00000485424 AGBL5Q8NDL9 886 aa13.15□□□□□ -0.3
UBA3-210ENST00000485424 OR4D9Q8NGE8 314 aa13.15□□□□□ -0.3
UBA3-210ENST00000485424 LRRN4Q8WUT4 740 aa13.15□□□□□ -0.3
UBA3-210ENST00000485424 PTCD2Q8WV60 388 aaKnown RBP13.15□□□□□ -0.3
UBA3-210ENST00000485424 TAAR9Q96RI9 348 aa13.15□□□□□ -0.3
UBA3-210ENST00000485424 XPO4Q9C0E2 1151 aaKnown RBP13.15□□□□□ -0.3
UBA3-210ENST00000485424 PLEKHM1Q9Y4G2 1056 aa13.15□□□□□ -0.3
UBA3-210ENST00000485424 HEY1Q9Y5J3 304 aa13.15□□□□□ -0.3
UBA3-210ENST00000485424 SPTAN1Q13813 2472 aaKnown RBP13.14□□□□□ -0.31
UBA3-210ENST00000485424 USP9XQ93008 2570 aaPredicted RBP13.14□□□□□ -0.31
UBA3-210ENST00000485424 IGHV5-10-1A0A0J9YXX1 117 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.14□□□□□ -0.31
UBA3-210ENST00000485424 APOL1O14791 398 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 PPP1R12AO14974 1030 aaPredicted RBP13.14□□□□□ -0.31
UBA3-210ENST00000485424 PPM1DO15297 605 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 SOD1P00441 154 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 JCHAINP01591 159 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 SLC4A1P02730 911 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 ATP1A1P05023 1023 aaKnown RBP13.14□□□□□ -0.31
UBA3-210ENST00000485424 TMEM253P0C7T8 217 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 KDELR1P24390 212 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 CD1CP29017 333 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 MAN1A1P33908 653 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 TNNT3P45378 269 aaPredicted RBP13.14□□□□□ -0.31
UBA3-210ENST00000485424 NOP2P46087 812 aaKnown RBP13.14□□□□□ -0.31
UBA3-210ENST00000485424 LIMK2P53671 638 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 TAS2R40P59535 323 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 CYP4F2P78329 520 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 GBE1Q04446 702 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 TBR1Q16650 682 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 NKAIN2Q5VXU1 208 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 CCDC70Q6NSX1 233 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 ZNF574Q6ZN55 896 aaPredicted RBP13.14□□□□□ -0.31
UBA3-210ENST00000485424 SLC9B2Q86UD5 537 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 FAM129CQ86XR2 697 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 IL22RA1Q8N6P7 574 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 OR8K1Q8NGG5 319 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 PMEPA1Q969W9 287 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 SH3KBP1Q96B97 665 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 FAF2Q96CS3 445 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 SCARF2Q96GP6 870 aaPredicted RBP13.14□□□□□ -0.31
UBA3-210ENST00000485424 RNF157Q96PX1 679 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 SMIM14Q96QK8 99 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 AGAP2Q99490 1192 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms