RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 CLCA4Q14CN2 919 aa19.08■□□□□ 0.64
COL27A1-205ENST00000485397 QPCTQ16769 361 aa19.08■□□□□ 0.64
COL27A1-205ENST00000485397 SNAP47Q5SQN1 464 aa19.08■□□□□ 0.64
COL27A1-205ENST00000485397 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.08■□□□□ 0.64
COL27A1-205ENST00000485397 FAM182AQ5T1J6 154 aa19.08■□□□□ 0.64
COL27A1-205ENST00000485397 CHST15Q7LFX5 561 aaPredicted RBP19.08■□□□□ 0.64
COL27A1-205ENST00000485397 FATE1Q969F0 183 aa19.08■□□□□ 0.64
COL27A1-205ENST00000485397 AHCYL2Q96HN2 611 aaKnown RBP19.08■□□□□ 0.64
COL27A1-205ENST00000485397 LYSMD1Q96S90 227 aa19.08■□□□□ 0.64
COL27A1-205ENST00000485397 DPYSL5Q9BPU6 564 aa19.08■□□□□ 0.64
COL27A1-205ENST00000485397 SLC12A9Q9BXP2 914 aa19.08■□□□□ 0.64
COL27A1-205ENST00000485397 TRIM4Q9C037 500 aa19.08■□□□□ 0.64
COL27A1-205ENST00000485397 CLMPQ9H6B4 373 aa19.08■□□□□ 0.64
COL27A1-205ENST00000485397 CTTNBP2NLQ9P2B4 639 aa19.08■□□□□ 0.64
COL27A1-205ENST00000485397 AMACRQ9UHK6 382 aa19.08■□□□□ 0.64
COL27A1-205ENST00000485397 DNPEPQ9ULA0 475 aa19.08■□□□□ 0.64
COL27A1-205ENST00000485397 NENFQ9UMX5 172 aa19.08■□□□□ 0.64
COL27A1-205ENST00000485397 KCNK6Q9Y257 313 aa19.08■□□□□ 0.64
COL27A1-205ENST00000485397 C1orf232A0A0U1RR37 186 aa19.07■□□□□ 0.64
COL27A1-205ENST00000485397 A8MU76 341 aa19.07■□□□□ 0.64
COL27A1-205ENST00000485397 FADS2P1A8MWK0 482 aa19.07■□□□□ 0.64
COL27A1-205ENST00000485397 PROSCO94903 275 aa19.07■□□□□ 0.64
COL27A1-205ENST00000485397 JCHAINP01591 159 aa19.07■□□□□ 0.64
COL27A1-205ENST00000485397 CA4P22748 312 aa19.07■□□□□ 0.64
COL27A1-205ENST00000485397 SPINT3P49223 89 aa19.07■□□□□ 0.64
COL27A1-205ENST00000485397 RPL26P61254 145 aaKnown RBP19.07■□□□□ 0.64
COL27A1-205ENST00000485397 PDK2Q15119 407 aa19.07■□□□□ 0.64
COL27A1-205ENST00000485397 FAM129CQ86XR2 697 aa19.07■□□□□ 0.64
COL27A1-205ENST00000485397 IL22RA1Q8N6P7 574 aa19.07■□□□□ 0.64
COL27A1-205ENST00000485397 CCDC112Q8NEF3 446 aa19.07■□□□□ 0.64
COL27A1-205ENST00000485397 OR10G6Q8NH81 332 aa19.07■□□□□ 0.64
COL27A1-205ENST00000485397 FAF2Q96CS3 445 aa19.07■□□□□ 0.64
COL27A1-205ENST00000485397 DDA1Q9BW61 102 aa19.07■□□□□ 0.64
COL27A1-205ENST00000485397 VPS18Q9P253 973 aa19.07■□□□□ 0.64
COL27A1-205ENST00000485397 PDP2Q9P2J9 529 aa19.07■□□□□ 0.64
COL27A1-205ENST00000485397 TBC1D29Q9UFV1 150 aa19.07■□□□□ 0.64
COL27A1-205ENST00000485397 RPL26L1Q9UNX3 145 aaKnown RBP19.07■□□□□ 0.64
COL27A1-205ENST00000485397 LUC7L2Q9Y383 392 aaKnown RBP19.07■□□□□ 0.64
COL27A1-205ENST00000485397 ASH1LQ9NR48 2969 aaKnown RBP19.07■□□□□ 0.64
COL27A1-205ENST00000485397 B4E171 279 aa19.06■□□□□ 0.64
COL27A1-205ENST00000485397 DUX1O43812 170 aa19.06■□□□□ 0.64
COL27A1-205ENST00000485397 GYPCP04921 128 aa19.06■□□□□ 0.64
COL27A1-205ENST00000485397 MMP2P08253 660 aa19.06■□□□□ 0.64
COL27A1-205ENST00000485397 ACP5P13686 325 aa19.06■□□□□ 0.64
COL27A1-205ENST00000485397 LIFP15018 202 aa19.06■□□□□ 0.64
COL27A1-205ENST00000485397 TSPAN7P41732 249 aa19.06■□□□□ 0.64
COL27A1-205ENST00000485397 CD86P42081 329 aa19.06■□□□□ 0.64
COL27A1-205ENST00000485397 TPM4P67936 248 aa19.06■□□□□ 0.64
COL27A1-205ENST00000485397 HHEXQ03014 270 aa19.06■□□□□ 0.64
COL27A1-205ENST00000485397 NFATC2Q13469 925 aa19.06■□□□□ 0.64
COL27A1-205ENST00000485397 HENMT1Q5T8I9 393 aaKnown RBP19.06■□□□□ 0.64
COL27A1-205ENST00000485397 ANKS6Q68DC2 871 aa19.06■□□□□ 0.64
COL27A1-205ENST00000485397 RAVER1Q8IY67 606 aaKnown RBP19.06■□□□□ 0.64
COL27A1-205ENST00000485397 CCDC13Q8IYE1 715 aa19.06■□□□□ 0.64
COL27A1-205ENST00000485397 BMPERQ8N8U9 685 aa19.06■□□□□ 0.64
COL27A1-205ENST00000485397 CCNYQ8ND76 341 aa19.06■□□□□ 0.64
COL27A1-205ENST00000485397 PACSIN1Q9BY11 444 aa19.06■□□□□ 0.64
COL27A1-205ENST00000485397 FAM83DQ9H4H8 585 aa19.06■□□□□ 0.64
COL27A1-205ENST00000485397 HAUS2Q9NVX0 235 aa19.06■□□□□ 0.64
COL27A1-205ENST00000485397 DTLQ9NZJ0 730 aa19.06■□□□□ 0.64
COL27A1-205ENST00000485397 TENM4Q6N022 2769 aa19.06■□□□□ 0.64
COL27A1-205ENST00000485397 ZFC3H1O60293 1989 aaKnown RBP19.05■□□□□ 0.64
COL27A1-205ENST00000485397 SYCE3A1L190 88 aa19.05■□□□□ 0.64
COL27A1-205ENST00000485397 KCNK1O00180 336 aa19.05■□□□□ 0.64
COL27A1-205ENST00000485397 RAD1O60671 282 aa19.05■□□□□ 0.64
COL27A1-205ENST00000485397 SNX2O60749 519 aa19.05■□□□□ 0.64
COL27A1-205ENST00000485397 MX2P20592 715 aa19.05■□□□□ 0.64
COL27A1-205ENST00000485397 ZFYVE27Q5T4F4 411 aa19.05■□□□□ 0.64
COL27A1-205ENST00000485397 DCAF12Q5T6F0 453 aa19.05■□□□□ 0.64
COL27A1-205ENST00000485397 IYDQ6PHW0 289 aa19.05■□□□□ 0.64
COL27A1-205ENST00000485397 MAP7D3Q8IWC1 876 aa19.05■□□□□ 0.64
COL27A1-205ENST00000485397 CACNA2D3Q8IZS8 1091 aa19.05■□□□□ 0.64
COL27A1-205ENST00000485397 CNTD1Q8N815 330 aa19.05■□□□□ 0.64
COL27A1-205ENST00000485397 NCSTNQ92542 709 aa19.05■□□□□ 0.64
COL27A1-205ENST00000485397 RAPGEF5Q92565 580 aa19.05■□□□□ 0.64
COL27A1-205ENST00000485397 HDAC11Q96DB2 347 aa19.05■□□□□ 0.64
COL27A1-205ENST00000485397 CTRCQ99895 268 aa19.05■□□□□ 0.64
COL27A1-205ENST00000485397 MLPHQ9BV36 600 aaPredicted RBP19.05■□□□□ 0.64
COL27A1-205ENST00000485397 ASPSCR1Q9BZE9 553 aa19.05■□□□□ 0.64
COL27A1-205ENST00000485397 ARFGAP3Q9NP61 516 aa19.05■□□□□ 0.64
COL27A1-205ENST00000485397 SARS2Q9NP81 518 aaKnown RBP19.05■□□□□ 0.64
COL27A1-205ENST00000485397 PKD2L2Q9NZM6 624 aa19.05■□□□□ 0.64
COL27A1-205ENST00000485397 A6NCN8 305 aa19.04■□□□□ 0.64
COL27A1-205ENST00000485397 ANKRD66B4E2M5 251 aa19.04■□□□□ 0.64
COL27A1-205ENST00000485397 KRT7P08729 469 aa19.04■□□□□ 0.64
COL27A1-205ENST00000485397 SFTPCP11686 197 aa19.04■□□□□ 0.64
COL27A1-205ENST00000485397 MAPK9P45984 424 aa19.04■□□□□ 0.64
COL27A1-205ENST00000485397 ZBTB17Q13105 803 aa19.04■□□□□ 0.64
COL27A1-205ENST00000485397 GALNT3Q14435 633 aa19.04■□□□□ 0.64
COL27A1-205ENST00000485397 ZNF648Q5T619 568 aaPredicted RBP19.04■□□□□ 0.64
COL27A1-205ENST00000485397 LYSMD3Q7Z3D4 306 aa19.04■□□□□ 0.64
COL27A1-205ENST00000485397 ARHGAP22Q7Z5H3 698 aa19.04■□□□□ 0.64
COL27A1-205ENST00000485397 CCHCR1Q8TD31 782 aa19.04■□□□□ 0.64
COL27A1-205ENST00000485397 EID2BQ96D98 161 aa19.04■□□□□ 0.64
COL27A1-205ENST00000485397 RNF157Q96PX1 679 aa19.04■□□□□ 0.64
COL27A1-205ENST00000485397 GEMIN8Q9NWZ8 242 aaKnown RBP19.04■□□□□ 0.64
COL27A1-205ENST00000485397 UVRAGQ9P2Y5 699 aa19.04■□□□□ 0.64
COL27A1-205ENST00000485397 MYO18BQ8IUG5 2567 aa19.03■□□□□ 0.64
COL27A1-205ENST00000485397 GRID2O43424 1007 aa19.03■□□□□ 0.64
COL27A1-205ENST00000485397 SUV39H1O43463 412 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms