RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	CAMP	P49913	170 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	HSD17B4	P51659	736 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	EFNA5	P52803	228 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	RAD23B	P54727	409 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	CLDN2	P57739	230 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	CEBPZ	Q03701	1054 aa	Known RBP	3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	IK	Q13123	557 aa	Predicted RBP	3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	TNFAIP1	Q13829	316 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	BAAT	Q14032	418 aa	Predicted RBP	3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	IRF3	Q14653	427 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	PLCB4	Q15147	1175 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	BMP2KL	Q5H9B9	411 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	KRT80	Q6KB66	452 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	HIST3H2A	Q7L7L0	130 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	LINGO2	Q7L985	606 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	ZNF329	Q86UD4	541 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	POGLUT1	Q8NBL1	392 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	SLC44A5	Q8NCS7	719 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	APPL2	Q8NEU8	664 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	GJC3	Q8NFK1	279 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	BEST2	Q8NFU1	509 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	CMAS	Q8NFW8	434 aa	Predicted RBP	3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	WFIKKN2	Q8TEU8	576 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	KAT2A	Q92830	837 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	ZNF419	Q96HQ0	510 aa	Predicted RBP	3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	LMLN	Q96KR4	655 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	MXRA8	Q9BRK3	442 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	WDR83	Q9BRX9	315 aa	Known RBP	3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	IFIH1	Q9BYX4	1025 aa	Known RBP	3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	NUF2	Q9BZD4	464 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	OR10A4	Q9H209	315 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	MAGEE1	Q9HCI5	957 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	WDR6	Q9NNW5	1121 aa	Known RBP	3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	ANKRD10	Q9NXR5	420 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	COPG2	Q9UBF2	871 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	UBA2	Q9UBT2	640 aa	Predicted RBP	3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	FBXL17	Q9UF56	701 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	NDRG3	Q9UGV2	375 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	UTS2R	Q9UKP6	389 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	EXO1	Q9UQ84	846 aa	Known RBP	3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	ERVK-11	Q9UQG0	969 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	FAM169A	Q9Y6X4	670 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	SLIT2	O94813	1529 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	KDM5A	P29375	1690 aa	Known RBP	3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	ZC3H13	Q5T200	1668 aa	Known RBP	3.97	□□□□□ -1.77
VPS8-223	ENST00000485024		A0A0A0MQY5	61 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	BTBD18	B2RXH4	712 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	ENTPD3	O75355	529 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	GJB3	O75712	270 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	NKX2-2	O95096	273 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	NDUFB4	O95168	129 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	MMP2	P08253	660 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	ETFA	P13804	333 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	DDX5	P17844	614 aa	Known RBP	3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	SRD5A1	P18405	259 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	MYF6	P23409	242 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	GPT	P24298	496 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	CAPZA2	P47755	286 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	LIG4	P49917	911 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	GALC	P54803	685 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	MRPS5	P82675	430 aa	Known RBP	3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	ARHGEF6	Q15052	776 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	ASTE1	Q2TB18	679 aa	Predicted RBP	3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	ALDH1L2	Q3SY69	923 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	C9orf152	Q5JTZ5	239 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	CES5A	Q6NT32	575 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	RPUSD3	Q6P087	351 aa	Known RBP	3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	ZNF549	Q6P9A3	640 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	SEPT14	Q6ZU15	432 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	PATL1	Q86TB9	770 aa	Known RBP	3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	TDRP	Q86YL5	185 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	DHX40	Q8IX18	779 aa	Known RBP	3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	SCCPDH	Q8NBX0	429 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	KCTD6	Q8NC69	237 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	SNAPC3	Q92966	411 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	SLC22A18	Q96BI1	424 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	ZNF570	Q96NI8	536 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	FIZ1	Q96SL8	496 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	KIFC3	Q9BVG8	833 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	GLIS2	Q9BZE0	524 aa	Predicted RBP	3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	EDEM3	Q9BZQ6	932 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	ZWILCH	Q9H900	591 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	MLXIPL	Q9NP71	852 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	CCDC177	Q9NQR7	707 aa	Predicted RBP	3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	TMEM45A	Q9NWC5	275 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	ARHGEF38	Q9NXL2	777 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	CWC15	Q9P013	229 aa	Known RBP	3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	GIMAP2	Q9UG22	337 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	NENF	Q9UMX5	172 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	MAGED1	Q9Y5V3	778 aa	Predicted RBP	3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	A3GALT2	U3KPV4	340 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	TNS1	Q9HBL0	1735 aa	Known RBP	3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	MLH3	Q9UHC1	1453 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024	ITSN2	Q9NZM3	1697 aa		3.97	□□□□□ -1.77
VPS8-223	ENST00000485024		A0A0U1RQF3	1178 aa		3.96	□□□□□ -1.78
VPS8-223	ENST00000485024	OR2A25	A4D2G3	310 aa		3.96	□□□□□ -1.78
VPS8-223	ENST00000485024	DDTL	A6NHG4	134 aa	Predicted RBP	3.96	□□□□□ -1.78
VPS8-223	ENST00000485024	HSPB2	A8KAH6	182 aa		3.96	□□□□□ -1.78
VPS8-223	ENST00000485024	SNAP23	O00161	211 aa		3.96	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms