RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 DNAJC28Q9NX36 388 aa16.61■□□□□ 0.25
CTSA-207ENST00000484855 OBP2AQ9NY56 170 aa16.61■□□□□ 0.25
CTSA-207ENST00000484855 TRMT6Q9UJA5 497 aaKnown RBP16.61■□□□□ 0.25
CTSA-207ENST00000484855 RAP2CQ9Y3L5 183 aa16.61■□□□□ 0.25
CTSA-207ENST00000484855 REV3LO60673 3130 aa16.61■□□□□ 0.25
CTSA-207ENST00000484855 MUC22E2RYF6 1773 aaPredicted RBP16.61■□□□□ 0.25
CTSA-207ENST00000484855 E5RI56 91 aa16.61■□□□□ 0.25
CTSA-207ENST00000484855 FCHO1O14526 889 aa16.61■□□□□ 0.25
CTSA-207ENST00000484855 LINC01565O15544 149 aa16.61■□□□□ 0.25
CTSA-207ENST00000484855 CHRM1P11229 460 aaPredicted RBP16.61■□□□□ 0.25
CTSA-207ENST00000484855 KCNA5P22460 613 aa16.61■□□□□ 0.25
CTSA-207ENST00000484855 LHCGRP22888 699 aa16.61■□□□□ 0.25
CTSA-207ENST00000484855 VASPP50552 380 aaPredicted RBP16.61■□□□□ 0.25
CTSA-207ENST00000484855 POLR2LP62875 67 aaKnown RBP16.61■□□□□ 0.25
CTSA-207ENST00000484855 PRKAA1Q13131 559 aa16.61■□□□□ 0.25
CTSA-207ENST00000484855 LRRC73Q5JTD7 316 aa16.61■□□□□ 0.25
CTSA-207ENST00000484855 BRAT1Q6PJG6 821 aa16.61■□□□□ 0.25
CTSA-207ENST00000484855 TRIM67Q6ZTA4 783 aa16.61■□□□□ 0.25
CTSA-207ENST00000484855 PIWIL4Q7Z3Z4 852 aaKnown RBP16.61■□□□□ 0.25
CTSA-207ENST00000484855 MAVSQ7Z434 540 aa16.61■□□□□ 0.25
CTSA-207ENST00000484855 TTC7BQ86TV6 843 aa16.61■□□□□ 0.25
CTSA-207ENST00000484855 SLC22A9Q8IVM8 553 aa16.61■□□□□ 0.25
CTSA-207ENST00000484855 AGR3Q8TD06 166 aa16.61■□□□□ 0.25
CTSA-207ENST00000484855 PPM1EQ8WY54 764 aa16.61■□□□□ 0.25
CTSA-207ENST00000484855 KCNJ9Q92806 393 aa16.61■□□□□ 0.25
CTSA-207ENST00000484855 PRR11Q96HE9 360 aaPredicted RBP16.61■□□□□ 0.25
CTSA-207ENST00000484855 TMEM237Q96Q45 408 aa16.61■□□□□ 0.25
CTSA-207ENST00000484855 NMUR2Q9GZQ4 415 aa16.61■□□□□ 0.25
CTSA-207ENST00000484855 P2RY12Q9H244 342 aa16.61■□□□□ 0.25
CTSA-207ENST00000484855 BRD9Q9H8M2 597 aa16.61■□□□□ 0.25
CTSA-207ENST00000484855 TRPV4Q9HBA0 871 aa16.61■□□□□ 0.25
CTSA-207ENST00000484855 THG1LQ9NWX6 298 aaKnown RBP16.61■□□□□ 0.25
CTSA-207ENST00000484855 WASF2Q9Y6W5 498 aa16.61■□□□□ 0.25
CTSA-207ENST00000484855 PIKFYVEQ9Y2I7 2098 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 H3BMM5 538 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 PRMT5O14744 637 aaPredicted RBP16.6■□□□□ 0.25
CTSA-207ENST00000484855 LEFTY1O75610 366 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 CD9P21926 228 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 FCARP24071 287 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 SERPINB5P36952 375 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 ST8SIA6P61647 398 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 HYAL1Q12794 435 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 CTC1Q2NKJ3 1217 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 EXT2Q93063 718 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 PBXIP1Q96AQ6 731 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 PHF21BQ96EK2 531 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 GDF15Q99988 308 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 DERL2Q9GZP9 239 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 SAR1AQ9NR31 198 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 B4GALT6Q9UBX8 382 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 IL36AQ9UHA7 158 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 CRLS1Q9UJA2 301 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 PCDHB1Q9Y5F3 818 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 ZNF195O14628 629 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 SMIM24O75264 130 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 CBX6O95503 412 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 ZNF7P17097 686 aaPredicted RBP16.6■□□□□ 0.25
CTSA-207ENST00000484855 CHRM3P20309 590 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 SLC6A11P48066 632 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 PDGFRLQ15198 375 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 CHRNA6Q15825 494 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 ARSIQ5FYB1 569 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 LYPLAL1Q5VWZ2 237 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 ANKRD54Q6NXT1 300 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 TMEM184AQ6ZMB5 413 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 NKAPQ8N5F7 415 aaKnown RBP16.6■□□□□ 0.25
CTSA-207ENST00000484855 SIDT2Q8NBJ9 832 aaKnown RBP16.6■□□□□ 0.25
CTSA-207ENST00000484855 RHEBL1Q8TAI7 183 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 KLHL29Q96CT2 875 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 FAM83CQ9BQN1 747 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 CLPBQ9H078 707 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 TFB2MQ9H5Q4 396 aaKnown RBP16.6■□□□□ 0.25
CTSA-207ENST00000484855 NSUN3Q9H649 340 aaKnown RBP16.6■□□□□ 0.25
CTSA-207ENST00000484855 ELOVL2Q9NXB9 296 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 GALPQ9UBC7 116 aa16.6■□□□□ 0.25
CTSA-207ENST00000484855 TCF20Q9UGU0 1960 aaKnown RBP16.59■□□□□ 0.25
CTSA-207ENST00000484855 TRBV5-4A0A0C4DH59 114 aa16.59■□□□□ 0.25
CTSA-207ENST00000484855 OTOL1A6NHN0 477 aaPredicted RBP16.59■□□□□ 0.25
CTSA-207ENST00000484855 CCDC22O60826 627 aa16.59■□□□□ 0.25
CTSA-207ENST00000484855 ACRV1P26436 265 aa16.59■□□□□ 0.25
CTSA-207ENST00000484855 KCNC1P48547 511 aa16.59■□□□□ 0.25
CTSA-207ENST00000484855 IDH3AP50213 366 aa16.59■□□□□ 0.25
CTSA-207ENST00000484855 RPL14P50914 215 aaKnown RBP16.59■□□□□ 0.25
CTSA-207ENST00000484855 HK2P52789 917 aa16.59■□□□□ 0.25
CTSA-207ENST00000484855 PTPN5P54829 565 aa16.59■□□□□ 0.25
CTSA-207ENST00000484855 ATP6V0D1P61421 351 aa16.59■□□□□ 0.25
CTSA-207ENST00000484855 PTSQ03393 145 aa16.59■□□□□ 0.25
CTSA-207ENST00000484855 KDSRQ06136 332 aa16.59■□□□□ 0.25
CTSA-207ENST00000484855 OR4D1Q15615 310 aa16.59■□□□□ 0.25
CTSA-207ENST00000484855 GAB4Q2WGN9 574 aa16.59■□□□□ 0.25
CTSA-207ENST00000484855 TANGO2Q6ICL3 276 aa16.59■□□□□ 0.25
CTSA-207ENST00000484855 SYCE2Q6PIF2 218 aa16.59■□□□□ 0.25
CTSA-207ENST00000484855 RBFAQ8N0V3 343 aa16.59■□□□□ 0.25
CTSA-207ENST00000484855 LSMEM2Q8N112 164 aa16.59■□□□□ 0.25
CTSA-207ENST00000484855 ZNF366Q8N895 744 aa16.59■□□□□ 0.25
CTSA-207ENST00000484855 GPR26Q8NDV2 337 aa16.59■□□□□ 0.25
CTSA-207ENST00000484855 CD200R1Q8TD46 325 aa16.59■□□□□ 0.25
CTSA-207ENST00000484855 NXPE3Q969Y0 559 aa16.59■□□□□ 0.25
CTSA-207ENST00000484855 SLC30A3Q99726 388 aa16.59■□□□□ 0.25
CTSA-207ENST00000484855 OSBPL1AQ9BXW6 950 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms