RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 NDUFB4O95168 129 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 BCL10O95999 233 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 NHLRC4P0CG21 123 aaPredicted RBP4.54□□□□□ -1.68
VPS13A-211ENST00000484581 VPREB1P12018 145 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 ENO3P13929 434 aaPredicted RBP4.54□□□□□ -1.68
VPS13A-211ENST00000484581 UBA1P22314 1058 aaKnown RBP4.54□□□□□ -1.68
VPS13A-211ENST00000484581 TNFSF8P32971 234 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 SIRPAP78324 504 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 CFHR1Q03591 330 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 UBXN1Q04323 297 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 GRSF1Q12849 480 aaKnown RBP eCLIP4.54□□□□□ -1.68
VPS13A-211ENST00000484581 SRSF7Q16629 238 aaKnown RBP eCLIP4.54□□□□□ -1.68
VPS13A-211ENST00000484581 C2orf68Q2NKX9 166 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 TYSND1Q2T9J0 566 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 PIWIL3Q7Z3Z3 882 aaKnown RBP4.54□□□□□ -1.68
VPS13A-211ENST00000484581 ADCK2Q7Z695 626 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 CENPVQ7Z7K6 275 aaPredicted RBP4.54□□□□□ -1.68
VPS13A-211ENST00000484581 LDB1Q86U70 411 aaPredicted RBP4.54□□□□□ -1.68
VPS13A-211ENST00000484581 CEP57Q86XR8 500 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 RBFAQ8N0V3 343 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 HORMAD2Q8N7B1 307 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 KDM1BQ8NB78 822 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 CFAP61Q8NHU2 1237 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 ERO1AQ96HE7 468 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 CCDC114Q96M63 670 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 ZNF778Q96MU6 729 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 MGME1Q9BQP7 344 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 B3GNT4Q9C0J1 378 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 LHPPQ9H008 270 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 PIGMQ9H3S5 423 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 DNAJC18Q9H819 358 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 ANKZF1Q9H8Y5 726 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 EPB41L5Q9HCM4 733 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 PIH1D3Q9NQM4 214 aaKnown RBP4.54□□□□□ -1.68
VPS13A-211ENST00000484581 CISD1Q9NZ45 108 aaKnown RBP4.54□□□□□ -1.68
VPS13A-211ENST00000484581 AGO2Q9UKV8 859 aaKnown RBP4.54□□□□□ -1.68
VPS13A-211ENST00000484581 LIPGQ9Y5X9 500 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 STON1Q9Y6Q2 735 aa4.54□□□□□ -1.68
VPS13A-211ENST00000484581 CGB1A6NKQ9 187 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 IPO8O15397 1037 aaKnown RBP4.53□□□□□ -1.68
VPS13A-211ENST00000484581 SPRY1O43609 319 aaPredicted RBP4.53□□□□□ -1.68
VPS13A-211ENST00000484581 UGDHO60701 494 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 FMO6PO60774 539 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 MOSPD3O75425 235 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 RSL1D1O76021 490 aaKnown RBP4.53□□□□□ -1.68
VPS13A-211ENST00000484581 RGS11O94810 467 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 GJA1P17302 382 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 MYF6P23409 242 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 ALDH3A2P51648 485 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 TUBA4AP68366 448 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 SPOCK1Q08629 439 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 PTK6Q13882 451 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 TUBB2AQ13885 445 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 ZNF273Q14593 569 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 MIDNQ504T8 468 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 DCAF6Q58WW2 860 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 TMEM211Q6ICI0 200 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 IYDQ6PHW0 289 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 MSANTD1Q6ZTZ1 278 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 MTSS1LQ765P7 747 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 CACNA2D4Q7Z3S7 1137 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 SDCCAG8Q86SQ7 713 aaPredicted RBP4.53□□□□□ -1.68
VPS13A-211ENST00000484581 ADIPOR2Q86V24 386 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 MAML2Q8IZL2 1156 aaPredicted RBP4.53□□□□□ -1.68
VPS13A-211ENST00000484581 NDUFAF2Q8N183 169 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 ARL10Q8N8L6 244 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 NAT8LQ8N9F0 302 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.53□□□□□ -1.68
VPS13A-211ENST00000484581 RBM15BQ8NDT2 890 aaKnown RBP4.53□□□□□ -1.68
VPS13A-211ENST00000484581 MOSPD2Q8NHP6 518 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 BICD2Q8TD16 824 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 MGARPQ8TDB4 240 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 HASPINQ8TF76 798 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 PTP4A1Q93096 173 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 TMEM18Q96B42 140 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 WDR83Q9BRX9 315 aaKnown RBP4.53□□□□□ -1.68
VPS13A-211ENST00000484581 MLPHQ9BV36 600 aaPredicted RBP4.53□□□□□ -1.68
VPS13A-211ENST00000484581 TUBB2BQ9BVA1 445 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 SCNM1Q9BWG6 230 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 C1QTNF7Q9BXJ2 289 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 NPFFR1Q9GZQ6 430 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 KCNK15Q9H427 330 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 MKKSQ9NPJ1 570 aaPredicted RBP4.53□□□□□ -1.68
VPS13A-211ENST00000484581 HINT3Q9NQE9 182 aaKnown RBP4.53□□□□□ -1.68
VPS13A-211ENST00000484581 CYSLTR2Q9NS75 346 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 CHCHD3Q9NX63 227 aaKnown RBP4.53□□□□□ -1.68
VPS13A-211ENST00000484581 LARSQ9P2J5 1176 aaKnown RBP4.53□□□□□ -1.68
VPS13A-211ENST00000484581 HACL1Q9UJ83 578 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 KNSTRNQ9Y448 316 aa4.53□□□□□ -1.68
VPS13A-211ENST00000484581 CPED1A4D0V7 1026 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 WIPF3A6NGB9 483 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 MANSC4A6NHS7 340 aaPredicted RBP4.52□□□□□ -1.69
VPS13A-211ENST00000484581 OR6C76A6NM76 312 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 PENKP01210 267 aaPredicted RBP4.52□□□□□ -1.69
VPS13A-211ENST00000484581 GH2P01242 217 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 ICAM1P05362 532 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 DDX5P17844 614 aaKnown RBP4.52□□□□□ -1.69
VPS13A-211ENST00000484581 CASTP20810 708 aaKnown RBP4.52□□□□□ -1.69
VPS13A-211ENST00000484581 MAOAP21397 527 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 TCEA1P23193 301 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms